RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 SAMD8Q96LT4 415 aa13.76□□□□□ -0.21
COL6A2-201ENST00000300527 TEX12Q9BXU0 123 aa13.76□□□□□ -0.21
COL6A2-201ENST00000300527 KCNN2Q9H2S1 579 aa13.76□□□□□ -0.21
COL6A2-201ENST00000300527 AUNIPQ9H7T9 357 aa13.76□□□□□ -0.21
COL6A2-201ENST00000300527 FGF20Q9NP95 211 aaPredicted RBP13.76□□□□□ -0.21
COL6A2-201ENST00000300527 MAN2C1Q9NTJ4 1040 aa13.76□□□□□ -0.21
COL6A2-201ENST00000300527 KLHL42Q9P2K6 505 aa13.76□□□□□ -0.21
COL6A2-201ENST00000300527 TAC3Q9UHF0 121 aa13.76□□□□□ -0.21
COL6A2-201ENST00000300527 IGLV3-16A0A075B6K0 115 aa13.76□□□□□ -0.21
COL6A2-201ENST00000300527 E9PI62 339 aa13.76□□□□□ -0.21
COL6A2-201ENST00000300527 TRIM77I1YAP6 450 aa13.76□□□□□ -0.21
COL6A2-201ENST00000300527 PLPP1O14494 284 aa13.76□□□□□ -0.21
COL6A2-201ENST00000300527 BTCP35070 178 aa13.76□□□□□ -0.21
COL6A2-201ENST00000300527 PDE7AQ13946 482 aa13.76□□□□□ -0.21
COL6A2-201ENST00000300527 TUSC1Q2TAM9 212 aa13.76□□□□□ -0.21
COL6A2-201ENST00000300527 ARSIQ5FYB1 569 aa13.76□□□□□ -0.21
COL6A2-201ENST00000300527 FAAP20Q6NZ36 180 aa13.76□□□□□ -0.21
COL6A2-201ENST00000300527 SFXN4Q6P4A7 337 aa13.76□□□□□ -0.21
COL6A2-201ENST00000300527 LINGO2Q7L985 606 aa13.76□□□□□ -0.21
COL6A2-201ENST00000300527 VRK2Q86Y07 508 aa13.76□□□□□ -0.21
COL6A2-201ENST00000300527 OR6M1Q8NGM8 313 aa13.76□□□□□ -0.21
COL6A2-201ENST00000300527 OR5P2Q8WZ92 322 aa13.76□□□□□ -0.21
COL6A2-201ENST00000300527 SCMH1Q96GD3 660 aa13.76□□□□□ -0.21
COL6A2-201ENST00000300527 C16orf58Q96GQ5 468 aa13.76□□□□□ -0.21
COL6A2-201ENST00000300527 SEC22CQ9BRL7 303 aa13.76□□□□□ -0.21
COL6A2-201ENST00000300527 FUZQ9BT04 418 aa13.76□□□□□ -0.21
COL6A2-201ENST00000300527 DLL4Q9NR61 685 aa13.76□□□□□ -0.21
COL6A2-201ENST00000300527 SERTM1A2A2V5 107 aa13.75□□□□□ -0.21
COL6A2-201ENST00000300527 NCBP2P52298 156 aaKnown RBP eCLIP13.75□□□□□ -0.21
COL6A2-201ENST00000300527 MAZP56270 477 aaKnown RBP13.75□□□□□ -0.21
COL6A2-201ENST00000300527 CAMK2DQ13557 499 aa13.75□□□□□ -0.21
COL6A2-201ENST00000300527 ZNF697Q5TEC3 545 aa13.75□□□□□ -0.21
COL6A2-201ENST00000300527 ZNF322Q6U7Q0 402 aaPredicted RBP13.75□□□□□ -0.21
COL6A2-201ENST00000300527 ZNF783Q6ZMS7 281 aa13.75□□□□□ -0.21
COL6A2-201ENST00000300527 NKAIN4Q8IVV8 208 aa13.75□□□□□ -0.21
COL6A2-201ENST00000300527 TBC1D19Q8N5T2 526 aa13.75□□□□□ -0.21
COL6A2-201ENST00000300527 ARIH2OSQ8N7S6 290 aa13.75□□□□□ -0.21
COL6A2-201ENST00000300527 AMER3Q8N944 861 aa13.75□□□□□ -0.21
COL6A2-201ENST00000300527 MOSPD2Q8NHP6 518 aa13.75□□□□□ -0.21
COL6A2-201ENST00000300527 ORAI1Q96D31 301 aa13.75□□□□□ -0.21
COL6A2-201ENST00000300527 SFXN2Q96NB2 322 aa13.75□□□□□ -0.21
COL6A2-201ENST00000300527 ALG8Q9BVK2 526 aa13.75□□□□□ -0.21
COL6A2-201ENST00000300527 CYSLTR2Q9NS75 346 aa13.75□□□□□ -0.21
COL6A2-201ENST00000300527 SDHAF2Q9NX18 166 aa13.75□□□□□ -0.21
COL6A2-201ENST00000300527 A0A1W2PRQ8 180 aa13.75□□□□□ -0.21
COL6A2-201ENST00000300527 IRGMA1A4Y4 181 aa13.75□□□□□ -0.21
COL6A2-201ENST00000300527 L7N2F9 121 aa13.75□□□□□ -0.21
COL6A2-201ENST00000300527 C1orf105O95561 183 aa13.75□□□□□ -0.21
COL6A2-201ENST00000300527 NAGAP17050 411 aa13.75□□□□□ -0.21
COL6A2-201ENST00000300527 HK1P19367 917 aa13.75□□□□□ -0.21
COL6A2-201ENST00000300527 IL32P24001 234 aa13.75□□□□□ -0.21
COL6A2-201ENST00000300527 PSMB5P28074 263 aa13.75□□□□□ -0.21
COL6A2-201ENST00000300527 E2F1Q01094 437 aa13.75□□□□□ -0.21
COL6A2-201ENST00000300527 CLLU1Q5K131 121 aa13.75□□□□□ -0.21
COL6A2-201ENST00000300527 SFRP5Q5T4F7 317 aa13.75□□□□□ -0.21
COL6A2-201ENST00000300527 USP50Q70EL3 339 aaPredicted RBP13.75□□□□□ -0.21
COL6A2-201ENST00000300527 PLA2G15Q8NCC3 412 aa13.75□□□□□ -0.21
COL6A2-201ENST00000300527 A4GALTQ9NPC4 353 aa13.75□□□□□ -0.21
COL6A2-201ENST00000300527 HINT3Q9NQE9 182 aaKnown RBP13.75□□□□□ -0.21
COL6A2-201ENST00000300527 MGAT4CQ9UBM8 478 aa13.75□□□□□ -0.21
COL6A2-201ENST00000300527 NDOR1Q9UHB4 597 aa13.75□□□□□ -0.21
COL6A2-201ENST00000300527 NUBP2Q9Y5Y2 271 aa13.75□□□□□ -0.21
COL6A2-201ENST00000300527 H7BY64 318 aa13.74□□□□□ -0.21
COL6A2-201ENST00000300527 TFP02787 698 aa13.74□□□□□ -0.21
COL6A2-201ENST00000300527 WNT1P04628 370 aa13.74□□□□□ -0.21
COL6A2-201ENST00000300527 ANKRD34CP0C6C1 535 aa13.74□□□□□ -0.21
COL6A2-201ENST00000300527 RRASP10301 218 aa13.74□□□□□ -0.21
COL6A2-201ENST00000300527 GABRR2P28476 465 aa13.74□□□□□ -0.21
COL6A2-201ENST00000300527 GCGRP47871 477 aa13.74□□□□□ -0.21
COL6A2-201ENST00000300527 VEGFCP49767 419 aa13.74□□□□□ -0.21
COL6A2-201ENST00000300527 CLDN2P57739 230 aa13.74□□□□□ -0.21
COL6A2-201ENST00000300527 OPCMLQ14982 345 aa13.74□□□□□ -0.21
COL6A2-201ENST00000300527 TCTE1Q5JU00 501 aa13.74□□□□□ -0.21
COL6A2-201ENST00000300527 HBMQ6B0K9 141 aa13.74□□□□□ -0.21
COL6A2-201ENST00000300527 GDPD4Q6W3E5 623 aa13.74□□□□□ -0.21
COL6A2-201ENST00000300527 SLC9B2Q86UD5 537 aa13.74□□□□□ -0.21
COL6A2-201ENST00000300527 PIGXQ8TBF5 258 aa13.74□□□□□ -0.21
COL6A2-201ENST00000300527 ZSWIM3Q96MP5 696 aa13.74□□□□□ -0.21
COL6A2-201ENST00000300527 PRAP1Q96NZ9 151 aa13.74□□□□□ -0.21
COL6A2-201ENST00000300527 OR2M2Q96R28 347 aa13.74□□□□□ -0.21
COL6A2-201ENST00000300527 SLC7A5P2Q9GIP4 190 aa13.74□□□□□ -0.21
COL6A2-201ENST00000300527 TTYH1Q9H313 450 aaPredicted RBP13.74□□□□□ -0.21
COL6A2-201ENST00000300527 ZNF69Q9UC07 566 aa13.74□□□□□ -0.21
COL6A2-201ENST00000300527 BAIAP2Q9UQB8 552 aa13.74□□□□□ -0.21
COL6A2-201ENST00000300527 GPR55Q9Y2T6 319 aaPredicted RBP13.74□□□□□ -0.21
COL6A2-201ENST00000300527 SESN1Q9Y6P5 492 aa13.74□□□□□ -0.21
COL6A2-201ENST00000300527 NEDD8-MDP1E9PL57 170 aa13.74□□□□□ -0.21
COL6A2-201ENST00000300527 POP4O95707 220 aaKnown RBP13.74□□□□□ -0.21
COL6A2-201ENST00000300527 ELNP15502 786 aa13.74□□□□□ -0.21
COL6A2-201ENST00000300527 CCND3P30281 292 aaPredicted RBP13.74□□□□□ -0.21
COL6A2-201ENST00000300527 HLA-FP30511 346 aa13.74□□□□□ -0.21
COL6A2-201ENST00000300527 MAPK9P45984 424 aa13.74□□□□□ -0.21
COL6A2-201ENST00000300527 GRM7Q14831 915 aa13.74□□□□□ -0.21
COL6A2-201ENST00000300527 NDUFA9Q16795 377 aa13.74□□□□□ -0.21
COL6A2-201ENST00000300527 ZNF311Q5JNZ3 666 aa13.74□□□□□ -0.21
COL6A2-201ENST00000300527 CD276Q5ZPR3 534 aa13.74□□□□□ -0.21
COL6A2-201ENST00000300527 NLRC3Q7RTR2 1065 aa13.74□□□□□ -0.21
COL6A2-201ENST00000300527 CHFRQ96EP1 664 aa13.74□□□□□ -0.21
COL6A2-201ENST00000300527 ZNF334Q9HCZ1 680 aaPredicted RBP13.74□□□□□ -0.21
COL6A2-201ENST00000300527 SEMA4GQ9NTN9 838 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms