RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 OTPQ5XKR4 325 aa12.49□□□□□ -0.41
TNFRSF21-201ENST00000296861 DCUN1D3Q8IWE4 304 aa12.49□□□□□ -0.41
TNFRSF21-201ENST00000296861 KLHDC8AQ8IYD2 350 aa12.49□□□□□ -0.41
TNFRSF21-201ENST00000296861 TOMM5Q8N4H5 51 aa12.49□□□□□ -0.41
TNFRSF21-201ENST00000296861 AKAP1Q92667 903 aaKnown RBP eCLIP12.49□□□□□ -0.41
TNFRSF21-201ENST00000296861 NXPE3Q969Y0 559 aa12.49□□□□□ -0.41
TNFRSF21-201ENST00000296861 TRMT2BQ96GJ1 504 aaKnown RBP12.49□□□□□ -0.41
TNFRSF21-201ENST00000296861 MAP6Q96JE9 813 aa12.49□□□□□ -0.41
TNFRSF21-201ENST00000296861 ZNF559Q9BR84 538 aa12.49□□□□□ -0.41
TNFRSF21-201ENST00000296861 CHST8Q9H2A9 424 aa12.49□□□□□ -0.41
TNFRSF21-201ENST00000296861 SLC7A7Q9UM01 511 aa12.49□□□□□ -0.41
TNFRSF21-201ENST00000296861 AK6Q9Y3D8 172 aaKnown RBP12.49□□□□□ -0.41
TNFRSF21-201ENST00000296861 TRAV27A0A087WT01 109 aa12.49□□□□□ -0.41
TNFRSF21-201ENST00000296861 A0A0B4J293 547 aa12.49□□□□□ -0.41
TNFRSF21-201ENST00000296861 PROM1O43490 865 aa12.49□□□□□ -0.41
TNFRSF21-201ENST00000296861 IL1AP01583 271 aa12.49□□□□□ -0.41
TNFRSF21-201ENST00000296861 SRPRAP08240 638 aaKnown RBP12.49□□□□□ -0.41
TNFRSF21-201ENST00000296861 CLUP10909 449 aa12.49□□□□□ -0.41
TNFRSF21-201ENST00000296861 ETV6P41212 452 aa12.49□□□□□ -0.41
TNFRSF21-201ENST00000296861 RPS5P46782 204 aaKnown RBP12.49□□□□□ -0.41
TNFRSF21-201ENST00000296861 KHKP50053 298 aa12.49□□□□□ -0.41
TNFRSF21-201ENST00000296861 PLK5Q496M5 336 aa12.49□□□□□ -0.41
TNFRSF21-201ENST00000296861 CXXC5Q7LFL8 322 aaKnown RBP12.49□□□□□ -0.41
TNFRSF21-201ENST00000296861 OR8D4Q8NGM9 314 aa12.49□□□□□ -0.41
TNFRSF21-201ENST00000296861 CPEB1Q9BZB8 566 aaKnown RBP12.49□□□□□ -0.41
TNFRSF21-201ENST00000296861 MRPS30Q9NP92 439 aaKnown RBP12.49□□□□□ -0.41
TNFRSF21-201ENST00000296861 A4GNTQ9UNA3 340 aa12.49□□□□□ -0.41
TNFRSF21-201ENST00000296861 VWA8A3KMH1 1905 aa12.49□□□□□ -0.41
TNFRSF21-201ENST00000296861 TRIOO75962 3097 aa12.49□□□□□ -0.41
TNFRSF21-201ENST00000296861 AGAP14A8MT82 685 aa12.49□□□□□ -0.41
TNFRSF21-201ENST00000296861 GTPBP1O00178 669 aaKnown RBP12.49□□□□□ -0.41
TNFRSF21-201ENST00000296861 SNRPBP14678 240 aaKnown RBP12.49□□□□□ -0.41
TNFRSF21-201ENST00000296861 CTNNB1P35222 781 aa12.49□□□□□ -0.41
TNFRSF21-201ENST00000296861 ANGPT1Q15389 498 aa12.49□□□□□ -0.41
TNFRSF21-201ENST00000296861 PRPF38BQ5VTL8 546 aaKnown RBP12.49□□□□□ -0.41
TNFRSF21-201ENST00000296861 SIGIRRQ6IA17 410 aa12.49□□□□□ -0.41
TNFRSF21-201ENST00000296861 TMC8Q8IU68 726 aa12.49□□□□□ -0.41
TNFRSF21-201ENST00000296861 FAM109AQ8N4B1 249 aa12.49□□□□□ -0.41
TNFRSF21-201ENST00000296861 RFKQ969G6 155 aa12.49□□□□□ -0.41
TNFRSF21-201ENST00000296861 RFT1Q96AA3 541 aa12.49□□□□□ -0.41
TNFRSF21-201ENST00000296861 NEURL3Q96EH8 262 aa12.49□□□□□ -0.41
TNFRSF21-201ENST00000296861 THAP7Q9BT49 309 aaPredicted RBP12.49□□□□□ -0.41
TNFRSF21-201ENST00000296861 C1QTNF6Q9BXI9 259 aa12.49□□□□□ -0.41
TNFRSF21-201ENST00000296861 ZDHHC5Q9C0B5 715 aa12.49□□□□□ -0.41
TNFRSF21-201ENST00000296861 SLC28A3Q9HAS3 691 aa12.49□□□□□ -0.41
TNFRSF21-201ENST00000296861 RBFOX1Q9NWB1 397 aaKnown RBP12.49□□□□□ -0.41
TNFRSF21-201ENST00000296861 NLGN3Q9NZ94 848 aa12.49□□□□□ -0.41
TNFRSF21-201ENST00000296861 SLC23A1Q9UHI7 598 aa12.49□□□□□ -0.41
TNFRSF21-201ENST00000296861 WDR45Q9Y484 360 aa12.49□□□□□ -0.41
TNFRSF21-201ENST00000296861 CHST2Q9Y4C5 530 aa12.49□□□□□ -0.41
TNFRSF21-201ENST00000296861 LANCL1O43813 399 aa12.48□□□□□ -0.41
TNFRSF21-201ENST00000296861 ZNF780AO75290 641 aaPredicted RBP12.48□□□□□ -0.41
TNFRSF21-201ENST00000296861 CDC123O75794 336 aaPredicted RBP12.48□□□□□ -0.41
TNFRSF21-201ENST00000296861 RASGRP1O95267 797 aa12.48□□□□□ -0.41
TNFRSF21-201ENST00000296861 PRNPP04156 253 aa12.48□□□□□ -0.41
TNFRSF21-201ENST00000296861 CCL5P13501 91 aa12.48□□□□□ -0.41
TNFRSF21-201ENST00000296861 CSNK2A2P19784 350 aaPredicted RBP12.48□□□□□ -0.41
TNFRSF21-201ENST00000296861 NT5EP21589 574 aa12.48□□□□□ -0.41
TNFRSF21-201ENST00000296861 ATP12AP54707 1039 aa12.48□□□□□ -0.41
TNFRSF21-201ENST00000296861 ST3GAL3Q11203 375 aa12.48□□□□□ -0.41
TNFRSF21-201ENST00000296861 TP53I3Q53FA7 332 aa12.48□□□□□ -0.41
TNFRSF21-201ENST00000296861 PARGQ86W56 976 aa12.48□□□□□ -0.41
TNFRSF21-201ENST00000296861 SLC16A11Q8NCK7 471 aa12.48□□□□□ -0.41
TNFRSF21-201ENST00000296861 PXYLP1Q8TE99 480 aa12.48□□□□□ -0.41
TNFRSF21-201ENST00000296861 DTD2Q96FN9 168 aa12.48□□□□□ -0.41
TNFRSF21-201ENST00000296861 GON7Q9BXV9 100 aa12.48□□□□□ -0.41
TNFRSF21-201ENST00000296861 ASGR2P07307 311 aa12.48□□□□□ -0.41
TNFRSF21-201ENST00000296861 PTHLHP12272 177 aa12.48□□□□□ -0.41
TNFRSF21-201ENST00000296861 IRS1P35568 1242 aa12.48□□□□□ -0.41
TNFRSF21-201ENST00000296861 PSMB10P40306 273 aa12.48□□□□□ -0.41
TNFRSF21-201ENST00000296861 SOX2P48431 317 aa12.48□□□□□ -0.41
TNFRSF21-201ENST00000296861 TAS2R38P59533 333 aa12.48□□□□□ -0.41
TNFRSF21-201ENST00000296861 PRR5P85299 388 aa12.48□□□□□ -0.41
TNFRSF21-201ENST00000296861 STX4Q12846 297 aa12.48□□□□□ -0.41
TNFRSF21-201ENST00000296861 TRAM2Q15035 370 aa12.48□□□□□ -0.41
TNFRSF21-201ENST00000296861 DHCR24Q15392 516 aa12.48□□□□□ -0.41
TNFRSF21-201ENST00000296861 OR4C11Q6IEV9 310 aa12.48□□□□□ -0.41
TNFRSF21-201ENST00000296861 C12orf40Q86WS4 652 aa12.48□□□□□ -0.41
TNFRSF21-201ENST00000296861 ZNF547Q8IVP9 402 aa12.48□□□□□ -0.41
TNFRSF21-201ENST00000296861 CDK20Q8IZL9 346 aa12.48□□□□□ -0.41
TNFRSF21-201ENST00000296861 SLC38A6Q8IZM9 456 aa12.48□□□□□ -0.41
TNFRSF21-201ENST00000296861 OR4M1Q8NGD0 313 aa12.48□□□□□ -0.41
TNFRSF21-201ENST00000296861 ARRDC3Q96B67 414 aa12.48□□□□□ -0.41
TNFRSF21-201ENST00000296861 CACNG6Q9BXT2 260 aa12.48□□□□□ -0.41
TNFRSF21-201ENST00000296861 TRPM6Q9BX84 2022 aa12.48□□□□□ -0.41
TNFRSF21-201ENST00000296861 NPC1O15118 1278 aa12.48□□□□□ -0.41
TNFRSF21-201ENST00000296861 PRKNO60260 465 aaPredicted RBP12.48□□□□□ -0.41
TNFRSF21-201ENST00000296861 UBXN7O94888 489 aa12.48□□□□□ -0.41
TNFRSF21-201ENST00000296861 ACP2P11117 423 aa12.48□□□□□ -0.41
TNFRSF21-201ENST00000296861 MMP12P39900 470 aa12.48□□□□□ -0.41
TNFRSF21-201ENST00000296861 MAGEB1P43366 347 aa12.48□□□□□ -0.41
TNFRSF21-201ENST00000296861 ANXA11P50995 505 aaKnown RBP12.48□□□□□ -0.41
TNFRSF21-201ENST00000296861 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.48□□□□□ -0.41
TNFRSF21-201ENST00000296861 YIF1BQ5BJH7 314 aa12.48□□□□□ -0.41
TNFRSF21-201ENST00000296861 ENTPD8Q5MY95 495 aa12.48□□□□□ -0.41
TNFRSF21-201ENST00000296861 PGBD3Q8N328 593 aa12.48□□□□□ -0.41
TNFRSF21-201ENST00000296861 ARL14Q8N4G2 192 aa12.48□□□□□ -0.41
TNFRSF21-201ENST00000296861 TBC1D19Q8N5T2 526 aa12.48□□□□□ -0.41
TNFRSF21-201ENST00000296861 TMEM163Q8TC26 289 aa12.48□□□□□ -0.41
TNFRSF21-201ENST00000296861 OTUB2Q96DC9 234 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms