RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 SUSD3Q96L08 255 aa10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 TGM7Q96PF1 710 aa10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 FAM83CQ9BQN1 747 aa10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 SERTAD3Q9UJW9 196 aa10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 GABRQQ9UN88 632 aa10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 DNAJC25-GNG10A0A024R161 153 aa10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 SNRNP70P08621 437 aaKnown RBP10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 TMEM225BP0DP42 221 aa10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 CTRB1P17538 263 aa10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 SSTR4P31391 388 aa10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 PGGT1BP53609 377 aa10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 HTD2P86397 168 aa10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 NDUFAF5Q5TEU4 345 aa10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 CTRB2Q6GPI1 263 aa10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 ZNF585AQ6P3V2 769 aa10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 PGM2L1Q6PCE3 622 aa10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 GDPGP1Q6ZNW5 385 aa10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 CREB3L2Q70SY1 520 aa10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 METTL27Q8N6F8 245 aaPredicted RBP10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 OR2T4Q8NH00 348 aa10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 LILRB1Q8NHL6 650 aaPredicted RBP10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 TFAP2CQ92754 450 aa10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 SCAMP4Q969E2 229 aa10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 TMEM125Q96AQ2 219 aa10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 BCO2Q9BYV7 579 aa10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 RNF186Q9NXI6 227 aa10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 NUBP2Q9Y5Y2 271 aa10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 RGPD3A6NKT7 1758 aaPredicted RBP10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 RGPD4Q7Z3J3 1758 aa10.19□□□□□ -0.78
PKNOX1-201ENST00000291547 HOXC11O43248 304 aaPredicted RBP10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 HCRTO43612 131 aa10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 PRAF2O60831 178 aa10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 SERPINA7P05543 415 aa10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 DHRS4L1P0CG22 281 aa10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 SLAMF1Q13291 335 aa10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 DEFB134Q4QY38 66 aa10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 PRRT3Q5FWE3 981 aa10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 IQCF1Q8N6M8 205 aa10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 BORCS7Q96B45 105 aa10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 SGCZQ96LD1 299 aa10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 SAMD10Q9BYL1 202 aa10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 KCNK13Q9HB14 408 aa10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 IL20RAQ9UHF4 553 aa10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 CACNG2Q9Y698 323 aa10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 TUBGCP6Q96RT7 1819 aa10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 CASC3O15234 703 aaKnown RBP10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 TNFSF12O43508 249 aa10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 ACTL6BO94805 426 aa10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 ATG12O94817 140 aa10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 GALTP07902 379 aa10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 GKP32189 559 aa10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 CLDN8P56748 225 aa10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 FXYD4P59646 89 aa10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 AWAT2Q6E213 333 aa10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 TMEM150AQ86TG1 271 aa10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 ZNF578Q96N58 590 aaPredicted RBP10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 TMEM248Q9NWD8 314 aa10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 ASB4Q9Y574 426 aa10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 MEIOCA2RUB1 952 aa10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 NME4O00746 187 aa10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 KIAA0355O15063 1070 aa10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 TSPAN6O43657 245 aa10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 CDK3Q00526 305 aa10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 DEFA6Q01524 100 aa10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 FLI1Q01543 452 aaPredicted RBP10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 C19orf57Q0VDD7 668 aa10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 SF3A2Q15428 464 aaKnown RBP10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 PROX2Q3B8N5 592 aa10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 TMEM107Q6UX40 140 aa10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 TMEM173Q86WV6 379 aaPredicted RBP10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 OR51L1Q8NGJ5 315 aa10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 FAM46AQ96IP4 442 aaKnown RBP10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 OR1F2PQ96R84 312 aa10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 F2RL3Q96RI0 385 aa10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 SMOQ99835 787 aa10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 SPIN2AQ99865 258 aa10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 SPIN2BQ9BPZ2 258 aa10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 LIN7BQ9HAP6 207 aa10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 HRASLS2Q9NWW9 162 aa10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 FAM230AA0A1W2PPH8 454 aa10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 NAP1L6A6NFF2 107 aa10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 A8MXE2 369 aa10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 SNAPINO95295 136 aa10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 SYNGR4O95473 234 aa10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 GAAP10253 952 aa10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 UGT2B7P16662 529 aa10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 GDI1P31150 447 aa10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 SHMT2P34897 504 aa10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 EIF2DP41214 584 aaKnown RBP10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 WNT4P56705 351 aa10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 VSX2P58304 361 aaPredicted RBP10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 PSPHP78330 225 aa10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 CDK5R2Q13319 367 aa10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 BTN1A1Q13410 526 aa10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 DOC2AQ14183 400 aa10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 ARL6IP1Q15041 203 aa10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 PTPRRQ15256 657 aa10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 CATSPEREQ5SY80 951 aa10.18□□□□□ -0.78
PKNOX1-201ENST00000291547 BBS1Q8NFJ9 593 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms