RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 ITPKCQ96DU7 683 aa14.91□□□□□ -0.02
SMAD6-201ENST00000288840 PRRC1Q96M27 445 aa14.91□□□□□ -0.02
SMAD6-201ENST00000288840 PLCXD1Q9NUJ7 323 aa14.91□□□□□ -0.02
SMAD6-201ENST00000288840 WSB2Q9NYS7 404 aaPredicted RBP14.91□□□□□ -0.02
SMAD6-201ENST00000288840 TAS2R7Q9NYW3 318 aa14.91□□□□□ -0.02
SMAD6-201ENST00000288840 IKZF2Q9UKS7 526 aa14.91□□□□□ -0.02
SMAD6-201ENST00000288840 POM121BA6NF01 834 aa14.91□□□□□ -0.02
SMAD6-201ENST00000288840 TOXO94900 526 aa14.91□□□□□ -0.02
SMAD6-201ENST00000288840 ITPKBP27987 946 aa14.91□□□□□ -0.02
SMAD6-201ENST00000288840 UGT2B10P36537 528 aa14.91□□□□□ -0.02
SMAD6-201ENST00000288840 GXYLT1Q4G148 440 aa14.91□□□□□ -0.02
SMAD6-201ENST00000288840 CEACAM19Q7Z692 300 aa14.91□□□□□ -0.02
SMAD6-201ENST00000288840 LRRC25Q8N386 305 aaPredicted RBP14.91□□□□□ -0.02
SMAD6-201ENST00000288840 OR4K13Q8NH42 304 aa14.91□□□□□ -0.02
SMAD6-201ENST00000288840 PELI2Q9HAT8 420 aa14.91□□□□□ -0.02
SMAD6-201ENST00000288840 IL21RQ9HBE5 538 aa14.91□□□□□ -0.02
SMAD6-201ENST00000288840 FBXO9Q9UK97 447 aaPredicted RBP14.91□□□□□ -0.02
SMAD6-201ENST00000288840 MRPS14O60783 128 aaKnown RBP14.91□□□□□ -0.02
SMAD6-201ENST00000288840 SEMA3DO95025 777 aa14.91□□□□□ -0.02
SMAD6-201ENST00000288840 MAP2K3P46734 347 aa14.91□□□□□ -0.02
SMAD6-201ENST00000288840 RPS21P63220 83 aaKnown RBP14.91□□□□□ -0.02
SMAD6-201ENST00000288840 ERV3-1Q14264 604 aa14.91□□□□□ -0.02
SMAD6-201ENST00000288840 FRRS1Q6ZNA5 592 aa14.91□□□□□ -0.02
SMAD6-201ENST00000288840 OAFQ86UD1 273 aa14.91□□□□□ -0.02
SMAD6-201ENST00000288840 SLC37A3Q8NCC5 494 aa14.91□□□□□ -0.02
SMAD6-201ENST00000288840 OR4C15Q8NGM1 316 aa14.91□□□□□ -0.02
SMAD6-201ENST00000288840 OR8K3Q8NH51 312 aa14.91□□□□□ -0.02
SMAD6-201ENST00000288840 SLC7A5P2Q9GIP4 190 aa14.91□□□□□ -0.02
SMAD6-201ENST00000288840 C11orf54Q9H0W9 315 aaPredicted RBP14.91□□□□□ -0.02
SMAD6-201ENST00000288840 CCDC59Q9P031 241 aaKnown RBP14.91□□□□□ -0.02
SMAD6-201ENST00000288840 GPR55Q9Y2T6 319 aaPredicted RBP14.91□□□□□ -0.02
SMAD6-201ENST00000288840 B4DGG1 531 aa14.9□□□□□ -0.02
SMAD6-201ENST00000288840 BLOC1S5-TXNDC5H3BN57 136 aa14.9□□□□□ -0.02
SMAD6-201ENST00000288840 EPHA5P54756 1037 aa14.9□□□□□ -0.02
SMAD6-201ENST00000288840 HYAL4Q2M3T9 481 aa14.9□□□□□ -0.02
SMAD6-201ENST00000288840 ATAD3CQ5T2N8 411 aa14.9□□□□□ -0.02
SMAD6-201ENST00000288840 NATD1Q8N6N6 113 aa14.9□□□□□ -0.02
SMAD6-201ENST00000288840 OR2M4Q96R27 311 aa14.9□□□□□ -0.02
SMAD6-201ENST00000288840 BTBD1Q9H0C5 482 aa14.9□□□□□ -0.02
SMAD6-201ENST00000288840 FGF22Q9HCT0 170 aa14.9□□□□□ -0.02
SMAD6-201ENST00000288840 BRD7Q9NPI1 651 aa14.9□□□□□ -0.02
SMAD6-201ENST00000288840 ENAMQ9NRM1 1142 aa14.9□□□□□ -0.02
SMAD6-201ENST00000288840 OR2W5A6NFC9 320 aa14.9□□□□□ -0.02
SMAD6-201ENST00000288840 CLEC3AO75596 197 aa14.9□□□□□ -0.02
SMAD6-201ENST00000288840 KLF8O95600 359 aaPredicted RBP14.9□□□□□ -0.02
SMAD6-201ENST00000288840 HMGN1P05114 100 aa14.9□□□□□ -0.02
SMAD6-201ENST00000288840 BMP8BP34820 402 aa14.9□□□□□ -0.02
SMAD6-201ENST00000288840 C1QTNF12Q5T7M4 302 aa14.9□□□□□ -0.02
SMAD6-201ENST00000288840 BMP8AQ7Z5Y6 402 aa14.9□□□□□ -0.02
SMAD6-201ENST00000288840 ACBD7Q8N6N7 88 aa14.9□□□□□ -0.02
SMAD6-201ENST00000288840 LRRC17Q8N6Y2 441 aa14.9□□□□□ -0.02
SMAD6-201ENST00000288840 ASB15Q8WXK1 588 aa14.9□□□□□ -0.02
SMAD6-201ENST00000288840 TMEM168Q9H0V1 697 aa14.9□□□□□ -0.02
SMAD6-201ENST00000288840 KCMF1Q9P0J7 381 aa14.9□□□□□ -0.02
SMAD6-201ENST00000288840 FTSJ1Q9UET6 329 aa14.9□□□□□ -0.02
SMAD6-201ENST00000288840 NAALAD2Q9Y3Q0 740 aa14.9□□□□□ -0.02
SMAD6-201ENST00000288840 LINC01553A4QN01 128 aa14.9□□□□□ -0.02
SMAD6-201ENST00000288840 CD79BP40259 229 aa14.9□□□□□ -0.02
SMAD6-201ENST00000288840 BLVRAP53004 296 aa14.9□□□□□ -0.02
SMAD6-201ENST00000288840 RPA4Q13156 261 aa14.9□□□□□ -0.02
SMAD6-201ENST00000288840 ANGPT1Q15389 498 aa14.9□□□□□ -0.02
SMAD6-201ENST00000288840 SYT9Q86SS6 491 aa14.9□□□□□ -0.02
SMAD6-201ENST00000288840 SIX5Q8N196 739 aa14.9□□□□□ -0.02
SMAD6-201ENST00000288840 OR2L3Q8NG85 312 aa14.9□□□□□ -0.02
SMAD6-201ENST00000288840 RAB7BQ96AH8 199 aa14.9□□□□□ -0.02
SMAD6-201ENST00000288840 ZMYND19Q96E35 227 aaPredicted RBP14.9□□□□□ -0.02
SMAD6-201ENST00000288840 FAM186AA6NE01 2351 aa14.9□□□□□ -0.02
SMAD6-201ENST00000288840 A0A0G2JPF8 293 aa14.89□□□□□ -0.03
SMAD6-201ENST00000288840 HNRNPCL3B7ZW38 293 aa14.89□□□□□ -0.03
SMAD6-201ENST00000288840 NARSO43776 548 aaKnown RBP14.89□□□□□ -0.03
SMAD6-201ENST00000288840 UBXN7O94888 489 aa14.89□□□□□ -0.03
SMAD6-201ENST00000288840 HNRNPCL4P0DMR1 293 aa14.89□□□□□ -0.03
SMAD6-201ENST00000288840 RHAGQ02094 409 aa14.89□□□□□ -0.03
SMAD6-201ENST00000288840 TRMT12Q53H54 448 aaKnown RBP14.89□□□□□ -0.03
SMAD6-201ENST00000288840 ASCC1Q8N9N2 400 aaKnown RBP14.89□□□□□ -0.03
SMAD6-201ENST00000288840 OR5T3Q8NGG3 340 aa14.89□□□□□ -0.03
SMAD6-201ENST00000288840 OR2A1Q8NGT9 310 aa14.89□□□□□ -0.03
SMAD6-201ENST00000288840 TRMT61AQ96FX7 289 aaKnown RBP14.89□□□□□ -0.03
SMAD6-201ENST00000288840 PTCHD1Q96NR3 888 aa14.89□□□□□ -0.03
SMAD6-201ENST00000288840 ERMAPQ96PL5 475 aaPredicted RBP14.89□□□□□ -0.03
SMAD6-201ENST00000288840 GAL3ST4Q96RP7 486 aa14.89□□□□□ -0.03
SMAD6-201ENST00000288840 MKRN2Q9H000 416 aaKnown RBP14.89□□□□□ -0.03
SMAD6-201ENST00000288840 MED28Q9H204 178 aa14.89□□□□□ -0.03
SMAD6-201ENST00000288840 PCDHGA3Q9Y5H0 932 aa14.89□□□□□ -0.03
SMAD6-201ENST00000288840 SOX2P48431 317 aa14.89□□□□□ -0.03
SMAD6-201ENST00000288840 CRYZQ08257 329 aaKnown RBP14.89□□□□□ -0.03
SMAD6-201ENST00000288840 FLYWCH1Q4VC44 716 aa14.89□□□□□ -0.03
SMAD6-201ENST00000288840 FAM27D1Q5T7N8 215 aa14.89□□□□□ -0.03
SMAD6-201ENST00000288840 FGD2Q7Z6J4 655 aa14.89□□□□□ -0.03
SMAD6-201ENST00000288840 SIMC1Q8NDZ2 872 aa14.89□□□□□ -0.03
SMAD6-201ENST00000288840 SLC35B4Q969S0 331 aa14.89□□□□□ -0.03
SMAD6-201ENST00000288840 ABCG5Q9H222 651 aa14.89□□□□□ -0.03
SMAD6-201ENST00000288840 SLC28A3Q9HAS3 691 aa14.89□□□□□ -0.03
SMAD6-201ENST00000288840 MOV10Q9HCE1 1003 aaKnown RBP14.89□□□□□ -0.03
SMAD6-201ENST00000288840 A4GALTQ9NPC4 353 aa14.89□□□□□ -0.03
SMAD6-201ENST00000288840 PLSCR3Q9NRY6 295 aa14.89□□□□□ -0.03
SMAD6-201ENST00000288840 MAFFQ9ULX9 164 aa14.89□□□□□ -0.03
SMAD6-201ENST00000288840 MED31Q9Y3C7 131 aa14.89□□□□□ -0.03
SMAD6-201ENST00000288840 SPAG17Q6Q759 2223 aa14.89□□□□□ -0.03
SMAD6-201ENST00000288840 IRGMA1A4Y4 181 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms