RNA–Protein interactions for RNA: ENST00000283228.6

PTPRR-201, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRR, Length 3,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-201ENST00000283228 BTBD1Q9H0C5 482 aa10.72□□□□□ -0.69
PTPRR-201ENST00000283228 ZCCHC4Q9H5U6 513 aa10.72□□□□□ -0.69
PTPRR-201ENST00000283228 REEP4Q9H6H4 257 aa10.72□□□□□ -0.69
PTPRR-201ENST00000283228 BRD9Q9H8M2 597 aa10.72□□□□□ -0.69
PTPRR-201ENST00000283228 DICER1Q9UPY3 1922 aaKnown RBP10.72□□□□□ -0.69
PTPRR-201ENST00000283228 A0A0G2JMZ2 1700 aa10.72□□□□□ -0.69
PTPRR-201ENST00000283228 LRRC37A2A6NM11 1700 aa10.72□□□□□ -0.69
PTPRR-201ENST00000283228 ABHD14A-ACY1A0A1B0GW23 586 aa10.72□□□□□ -0.69
PTPRR-201ENST00000283228 DAPL1A0PJW8 107 aa10.72□□□□□ -0.69
PTPRR-201ENST00000283228 FAM170BA6NMN3 283 aa10.72□□□□□ -0.69
PTPRR-201ENST00000283228 K7ERQ8 282 aa10.72□□□□□ -0.69
PTPRR-201ENST00000283228 CREBL2O60519 120 aaPredicted RBP10.72□□□□□ -0.69
PTPRR-201ENST00000283228 NDUFS6O75380 124 aaKnown RBP10.72□□□□□ -0.69
PTPRR-201ENST00000283228 KLHL18O94889 574 aa10.72□□□□□ -0.69
PTPRR-201ENST00000283228 NTN1O95631 604 aa10.72□□□□□ -0.69
PTPRR-201ENST00000283228 SERPINA3P01011 423 aa10.72□□□□□ -0.69
PTPRR-201ENST00000283228 DRD2P14416 443 aa10.72□□□□□ -0.69
PTPRR-201ENST00000283228 SYN1P17600 705 aa10.72□□□□□ -0.69
PTPRR-201ENST00000283228 FGF9P31371 208 aaPredicted RBP10.72□□□□□ -0.69
PTPRR-201ENST00000283228 SMIM11AP58511 58 aa10.72□□□□□ -0.69
PTPRR-201ENST00000283228 TAS2R41P59536 307 aa10.72□□□□□ -0.69
PTPRR-201ENST00000283228 GMFBP60983 142 aa10.72□□□□□ -0.69
PTPRR-201ENST00000283228 VASNQ6EMK4 673 aa10.72□□□□□ -0.69
PTPRR-201ENST00000283228 APOOLQ6UXV4 268 aa10.72□□□□□ -0.69
PTPRR-201ENST00000283228 RAB11FIP2Q7L804 512 aa10.72□□□□□ -0.69
PTPRR-201ENST00000283228 GPC2Q8N158 579 aa10.72□□□□□ -0.69
PTPRR-201ENST00000283228 PLA2G15Q8NCC3 412 aa10.72□□□□□ -0.69
PTPRR-201ENST00000283228 ZFPM2Q8WW38 1151 aa10.72□□□□□ -0.69
PTPRR-201ENST00000283228 YIPF5Q969M3 257 aa10.72□□□□□ -0.69
PTPRR-201ENST00000283228 MAGEH1Q9H213 219 aa10.72□□□□□ -0.69
PTPRR-201ENST00000283228 GPN1Q9HCN4 374 aaPredicted RBP10.72□□□□□ -0.69
PTPRR-201ENST00000283228 TDP1Q9NUW8 608 aa10.72□□□□□ -0.69
PTPRR-201ENST00000283228 C14orf105Q9NVL8 296 aa10.72□□□□□ -0.69
PTPRR-201ENST00000283228 ZSCAN32Q9NX65 697 aa10.72□□□□□ -0.69
PTPRR-201ENST00000283228 ZNF236Q9UL36 1845 aa10.71□□□□□ -0.69
PTPRR-201ENST00000283228 TMEM129A0AVI4 362 aa10.71□□□□□ -0.69
PTPRR-201ENST00000283228 IRGMA1A4Y4 181 aa10.71□□□□□ -0.69
PTPRR-201ENST00000283228 AGAP14A8MT82 685 aa10.71□□□□□ -0.69
PTPRR-201ENST00000283228 SERPIND1P05546 499 aa10.71□□□□□ -0.69
PTPRR-201ENST00000283228 HSD3B1P14060 373 aa10.71□□□□□ -0.69
PTPRR-201ENST00000283228 OR1G1P47890 313 aa10.71□□□□□ -0.69
PTPRR-201ENST00000283228 RAB13P51153 203 aa10.71□□□□□ -0.69
PTPRR-201ENST00000283228 SPAG16Q8N0X2 631 aa10.71□□□□□ -0.69
PTPRR-201ENST00000283228 BPIFCQ8NFQ6 507 aa10.71□□□□□ -0.69
PTPRR-201ENST00000283228 OR13C5Q8NGS8 318 aa10.71□□□□□ -0.69
PTPRR-201ENST00000283228 CLP1Q92989 425 aaKnown RBP10.71□□□□□ -0.69
PTPRR-201ENST00000283228 EXOSC8Q96B26 276 aaKnown RBP10.71□□□□□ -0.69
PTPRR-201ENST00000283228 CPNE2Q96FN4 548 aaPredicted RBP10.71□□□□□ -0.69
PTPRR-201ENST00000283228 FAM46AQ96IP4 442 aaKnown RBP10.71□□□□□ -0.69
PTPRR-201ENST00000283228 SOSTQ9BQB4 213 aa10.71□□□□□ -0.69
PTPRR-201ENST00000283228 MFFQ9GZY8 342 aa10.71□□□□□ -0.69
PTPRR-201ENST00000283228 ESRP2Q9H6T0 727 aaKnown RBP10.71□□□□□ -0.69
PTPRR-201ENST00000283228 TMEM185BQ9H7F4 350 aa10.71□□□□□ -0.69
PTPRR-201ENST00000283228 SLC6A5Q9Y345 797 aa10.71□□□□□ -0.69
PTPRR-201ENST00000283228 SOCS6O14544 535 aa10.71□□□□□ -0.69
PTPRR-201ENST00000283228 GOSR2O14653 212 aa10.71□□□□□ -0.69
PTPRR-201ENST00000283228 PRG2P13727 222 aa10.71□□□□□ -0.69
PTPRR-201ENST00000283228 ACRV1P26436 265 aa10.71□□□□□ -0.69
PTPRR-201ENST00000283228 TIA1P31483 386 aaKnown RBP eCLIP10.71□□□□□ -0.69
PTPRR-201ENST00000283228 SEC61A1P61619 476 aaKnown RBP10.71□□□□□ -0.69
PTPRR-201ENST00000283228 GPR33Q49SQ1 333 aa10.71□□□□□ -0.69
PTPRR-201ENST00000283228 NR2C2APQ86WQ0 139 aa10.71□□□□□ -0.69
PTPRR-201ENST00000283228 PXT1Q8NFP0 134 aa10.71□□□□□ -0.69
PTPRR-201ENST00000283228 WFDC6Q9BQY6 131 aa10.71□□□□□ -0.69
PTPRR-201ENST00000283228 ACTR6Q9GZN1 396 aa10.71□□□□□ -0.69
PTPRR-201ENST00000283228 MED20Q9H944 212 aa10.71□□□□□ -0.69
PTPRR-201ENST00000283228 CACYBPQ9HB71 228 aaKnown RBP10.71□□□□□ -0.69
PTPRR-201ENST00000283228 NOX3Q9HBY0 568 aa10.71□□□□□ -0.69
PTPRR-201ENST00000283228 PRMT8Q9NR22 394 aaPredicted RBP10.71□□□□□ -0.69
PTPRR-201ENST00000283228 C1GALT1Q9NS00 363 aa10.71□□□□□ -0.69
PTPRR-201ENST00000283228 AK6Q9Y3D8 172 aaKnown RBP10.71□□□□□ -0.69
PTPRR-201ENST00000283228 MCRIP1C9JLW8 97 aa10.71□□□□□ -0.7
PTPRR-201ENST00000283228 SLC2A10O95528 541 aa10.71□□□□□ -0.7
PTPRR-201ENST00000283228 ZNF35P13682 527 aa10.71□□□□□ -0.7
PTPRR-201ENST00000283228 GNSP15586 552 aa10.71□□□□□ -0.7
PTPRR-201ENST00000283228 NPR2P20594 1047 aa10.71□□□□□ -0.7
PTPRR-201ENST00000283228 ACHEP22303 614 aa10.71□□□□□ -0.7
PTPRR-201ENST00000283228 GPR4P46093 362 aa10.71□□□□□ -0.7
PTPRR-201ENST00000283228 PITPNAQ00169 270 aa10.71□□□□□ -0.7
PTPRR-201ENST00000283228 COL9A2Q14055 689 aaPredicted RBP10.71□□□□□ -0.7
PTPRR-201ENST00000283228 METTL11BQ5VVY1 283 aa10.71□□□□□ -0.7
PTPRR-201ENST00000283228 RPTNQ6XPR3 784 aa10.71□□□□□ -0.7
PTPRR-201ENST00000283228 TMEM17Q86X19 198 aa10.71□□□□□ -0.7
PTPRR-201ENST00000283228 HORMAD2Q8N7B1 307 aa10.71□□□□□ -0.7
PTPRR-201ENST00000283228 OR4D9Q8NGE8 314 aa10.71□□□□□ -0.7
PTPRR-201ENST00000283228 THAP6Q8TBB0 222 aa10.71□□□□□ -0.7
PTPRR-201ENST00000283228 SLC38A5Q8WUX1 472 aa10.71□□□□□ -0.7
PTPRR-201ENST00000283228 RFKQ969G6 155 aa10.71□□□□□ -0.7
PTPRR-201ENST00000283228 MRPS24Q96EL2 167 aaKnown RBP10.71□□□□□ -0.7
PTPRR-201ENST00000283228 FUBP3Q96I24 572 aaKnown RBP eCLIP10.71□□□□□ -0.7
PTPRR-201ENST00000283228 ZNF607Q96SK3 696 aa10.71□□□□□ -0.7
PTPRR-201ENST00000283228 FZD3Q9NPG1 666 aa10.71□□□□□ -0.7
PTPRR-201ENST00000283228 GKN1Q9NS71 199 aa10.71□□□□□ -0.7
PTPRR-201ENST00000283228 RNF13O43567 381 aa10.7□□□□□ -0.7
PTPRR-201ENST00000283228 SUSD5O60279 629 aa10.7□□□□□ -0.7
PTPRR-201ENST00000283228 STX11O75558 287 aa10.7□□□□□ -0.7
PTPRR-201ENST00000283228 ARAFP10398 606 aa10.7□□□□□ -0.7
PTPRR-201ENST00000283228 PPP3CBP16298 524 aa10.7□□□□□ -0.7
PTPRR-201ENST00000283228 CD22P20273 847 aa10.7□□□□□ -0.7
PTPRR-201ENST00000283228 PSMB1P20618 241 aaKnown RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms