RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 SMAD3P84022 425 aaKnown RBP12.05□□□□□ -0.48
HERC6-202ENST00000273960 ATXN7L3Q14CW9 347 aaPredicted RBP12.05□□□□□ -0.48
HERC6-202ENST00000273960 ZNF770Q6IQ21 691 aaPredicted RBP12.05□□□□□ -0.48
HERC6-202ENST00000273960 PLBD1Q6P4A8 553 aa12.05□□□□□ -0.48
HERC6-202ENST00000273960 CEACAM19Q7Z692 300 aa12.05□□□□□ -0.48
HERC6-202ENST00000273960 CLRN3Q8NCR9 226 aa12.05□□□□□ -0.48
HERC6-202ENST00000273960 OR10H4Q8NGA5 316 aa12.05□□□□□ -0.48
HERC6-202ENST00000273960 SLC38A5Q8WUX1 472 aa12.05□□□□□ -0.48
HERC6-202ENST00000273960 SLC6A15Q9H2J7 730 aa12.05□□□□□ -0.48
HERC6-202ENST00000273960 NTMQ9P121 344 aa12.05□□□□□ -0.48
HERC6-202ENST00000273960 MEIKINA0A087WXM9 373 aa12.05□□□□□ -0.48
HERC6-202ENST00000273960 NDUFA2O43678 99 aa12.05□□□□□ -0.48
HERC6-202ENST00000273960 PRMT3O60678 531 aa12.05□□□□□ -0.48
HERC6-202ENST00000273960 PTP4A3O75365 173 aa12.05□□□□□ -0.48
HERC6-202ENST00000273960 F12P00748 615 aaPredicted RBP12.05□□□□□ -0.48
HERC6-202ENST00000273960 HLA-DQB1P01920 261 aa12.05□□□□□ -0.48
HERC6-202ENST00000273960 ZNF8P17098 575 aaPredicted RBP12.05□□□□□ -0.48
HERC6-202ENST00000273960 C11orf88Q6PI97 169 aa12.05□□□□□ -0.48
HERC6-202ENST00000273960 NCEH1Q6PIU2 408 aa12.05□□□□□ -0.48
HERC6-202ENST00000273960 OR52N2Q8NGI0 321 aa12.05□□□□□ -0.48
HERC6-202ENST00000273960 TEX47Q8TBZ9 253 aa12.05□□□□□ -0.48
HERC6-202ENST00000273960 THAP4Q8WY91 577 aa12.05□□□□□ -0.48
HERC6-202ENST00000273960 FAM46AQ96IP4 442 aaKnown RBP12.05□□□□□ -0.48
HERC6-202ENST00000273960 TAS2R3Q9NYW6 316 aa12.05□□□□□ -0.48
HERC6-202ENST00000273960 H2AFY2Q9P0M6 372 aaPredicted RBP12.05□□□□□ -0.48
HERC6-202ENST00000273960 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.05□□□□□ -0.48
HERC6-202ENST00000273960 TMEM202A6NGA9 273 aa12.05□□□□□ -0.48
HERC6-202ENST00000273960 RLN1P04808 185 aa12.05□□□□□ -0.48
HERC6-202ENST00000273960 SYPL1Q16563 259 aa12.05□□□□□ -0.48
HERC6-202ENST00000273960 ZCCHC12Q6PEW1 402 aa12.05□□□□□ -0.48
HERC6-202ENST00000273960 CBLN2Q8IUK8 224 aa12.05□□□□□ -0.48
HERC6-202ENST00000273960 ZNF740Q8NDX6 193 aa12.05□□□□□ -0.48
HERC6-202ENST00000273960 EXOSC8Q96B26 276 aaKnown RBP12.05□□□□□ -0.48
HERC6-202ENST00000273960 GIMAP5Q96F15 307 aa12.05□□□□□ -0.48
HERC6-202ENST00000273960 OR1F2PQ96R84 312 aa12.05□□□□□ -0.48
HERC6-202ENST00000273960 SOSTQ9BQB4 213 aa12.05□□□□□ -0.48
HERC6-202ENST00000273960 POLMQ9NP87 494 aaPredicted RBP12.05□□□□□ -0.48
HERC6-202ENST00000273960 TNFRSF10DQ9UBN6 386 aa12.05□□□□□ -0.48
HERC6-202ENST00000273960 RPS6KB2Q9UBS0 482 aa12.05□□□□□ -0.48
HERC6-202ENST00000273960 CORO2BQ9UQ03 480 aa12.05□□□□□ -0.48
HERC6-202ENST00000273960 LIPT1Q9Y234 373 aa12.05□□□□□ -0.48
HERC6-202ENST00000273960 NTNG1Q9Y2I2 539 aa12.05□□□□□ -0.48
HERC6-202ENST00000273960 NUBP2Q9Y5Y2 271 aa12.05□□□□□ -0.48
HERC6-202ENST00000273960 SLC38A8A6NNN8 435 aa12.04□□□□□ -0.48
HERC6-202ENST00000273960 GAPDHSO14556 408 aaPredicted RBP12.04□□□□□ -0.48
HERC6-202ENST00000273960 NPR2P20594 1047 aa12.04□□□□□ -0.48
HERC6-202ENST00000273960 PPIBP23284 216 aaKnown RBP12.04□□□□□ -0.48
HERC6-202ENST00000273960 HOXC8P31273 242 aa12.04□□□□□ -0.48
HERC6-202ENST00000273960 GPR4P46093 362 aa12.04□□□□□ -0.48
HERC6-202ENST00000273960 PXNP49023 591 aaPredicted RBP12.04□□□□□ -0.48
HERC6-202ENST00000273960 CLDN12P56749 244 aa12.04□□□□□ -0.48
HERC6-202ENST00000273960 ARF5P84085 180 aa12.04□□□□□ -0.48
HERC6-202ENST00000273960 MC2RQ01718 297 aa12.04□□□□□ -0.48
HERC6-202ENST00000273960 TPBGQ13641 420 aa12.04□□□□□ -0.48
HERC6-202ENST00000273960 TMEM255AQ5JRV8 349 aa12.04□□□□□ -0.48
HERC6-202ENST00000273960 TXNDC8Q6A555 127 aa12.04□□□□□ -0.48
HERC6-202ENST00000273960 REEP3Q6NUK4 255 aa12.04□□□□□ -0.48
HERC6-202ENST00000273960 LRRN1Q6UXK5 716 aa12.04□□□□□ -0.48
HERC6-202ENST00000273960 CERS6Q6ZMG9 384 aa12.04□□□□□ -0.48
HERC6-202ENST00000273960 COMTD1Q86VU5 262 aa12.04□□□□□ -0.48
HERC6-202ENST00000273960 ARL14EPQ8N8R7 260 aaPredicted RBP12.04□□□□□ -0.48
HERC6-202ENST00000273960 FBXO15Q8NCQ5 510 aaPredicted RBP12.04□□□□□ -0.48
HERC6-202ENST00000273960 SLC22A8Q8TCC7 542 aa12.04□□□□□ -0.48
HERC6-202ENST00000273960 ZDHHC1Q8WTX9 485 aa12.04□□□□□ -0.48
HERC6-202ENST00000273960 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.04□□□□□ -0.48
HERC6-202ENST00000273960 LDAHQ9H6V9 325 aa12.04□□□□□ -0.48
HERC6-202ENST00000273960 BTNL2Q9UIR0 455 aa12.04□□□□□ -0.48
HERC6-202ENST00000273960 SCML2Q9UQR0 700 aa12.04□□□□□ -0.48
HERC6-202ENST00000273960 RAB19A4D1S5 217 aa12.04□□□□□ -0.48
HERC6-202ENST00000273960 FZD6O60353 706 aa12.04□□□□□ -0.48
HERC6-202ENST00000273960 SERPIND1P05546 499 aa12.04□□□□□ -0.48
HERC6-202ENST00000273960 IL3P08700 152 aa12.04□□□□□ -0.48
HERC6-202ENST00000273960 GNSP15586 552 aa12.04□□□□□ -0.48
HERC6-202ENST00000273960 MMP12P39900 470 aa12.04□□□□□ -0.48
HERC6-202ENST00000273960 PFN3P60673 137 aa12.04□□□□□ -0.48
HERC6-202ENST00000273960 SERTAD2Q14140 314 aa12.04□□□□□ -0.48
HERC6-202ENST00000273960 HECTD3Q5T447 861 aa12.04□□□□□ -0.48
HERC6-202ENST00000273960 TFAP2EQ6VUC0 442 aa12.04□□□□□ -0.48
HERC6-202ENST00000273960 COMMD6Q7Z4G1 85 aa12.04□□□□□ -0.48
HERC6-202ENST00000273960 TRMT11Q7Z4G4 463 aaKnown RBP12.04□□□□□ -0.48
HERC6-202ENST00000273960 HDDC3Q8N4P3 179 aa12.04□□□□□ -0.48
HERC6-202ENST00000273960 OR5M3Q8NGP4 307 aa12.04□□□□□ -0.48
HERC6-202ENST00000273960 ADAMTS19Q8TE59 1207 aa12.04□□□□□ -0.48
HERC6-202ENST00000273960 SCAMP4Q969E2 229 aa12.04□□□□□ -0.48
HERC6-202ENST00000273960 WBP2Q969T9 261 aa12.04□□□□□ -0.48
HERC6-202ENST00000273960 SLC38A3Q99624 504 aa12.04□□□□□ -0.48
HERC6-202ENST00000273960 CMSS1Q9BQ75 279 aaKnown RBP12.04□□□□□ -0.48
HERC6-202ENST00000273960 ARHGAP9Q9BRR9 750 aa12.04□□□□□ -0.48
HERC6-202ENST00000273960 SMG9Q9H0W8 520 aaKnown RBP12.04□□□□□ -0.48
HERC6-202ENST00000273960 C20orf85Q9H1P6 137 aa12.04□□□□□ -0.48
HERC6-202ENST00000273960 OR51V1Q9H2C8 321 aa12.04□□□□□ -0.48
HERC6-202ENST00000273960 OR51I1Q9H343 314 aa12.04□□□□□ -0.48
HERC6-202ENST00000273960 BRD9Q9H8M2 597 aa12.04□□□□□ -0.48
HERC6-202ENST00000273960 GULP1Q9UBP9 304 aa12.04□□□□□ -0.48
HERC6-202ENST00000273960 IGLV3-10A0A075B6K4 115 aa12.03□□□□□ -0.48
HERC6-202ENST00000273960 TRDV1A0A1B0GX56 115 aa12.03□□□□□ -0.48
HERC6-202ENST00000273960 E9PI62 339 aa12.03□□□□□ -0.48
HERC6-202ENST00000273960 NARSO43776 548 aaKnown RBP12.03□□□□□ -0.48
HERC6-202ENST00000273960 NDUFS6O75380 124 aaKnown RBP12.03□□□□□ -0.48
HERC6-202ENST00000273960 NFYAP23511 347 aaPredicted RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms