RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 DIO2Q92813 273 aa17.03■□□□□ 0.32
COL5A3-201ENST00000264828 KIAA1143Q96AT1 154 aaPredicted RBP17.03■□□□□ 0.32
COL5A3-201ENST00000264828 GMLQ99445 158 aa17.03■□□□□ 0.32
COL5A3-201ENST00000264828 GPN2Q9H9Y4 310 aaPredicted RBP17.03■□□□□ 0.32
COL5A3-201ENST00000264828 SLCO3A1Q9UIG8 710 aa17.03■□□□□ 0.32
COL5A3-201ENST00000264828 TRAPPC13A5PLN9 417 aa17.03■□□□□ 0.32
COL5A3-201ENST00000264828 B4GAT1O43505 415 aa17.03■□□□□ 0.32
COL5A3-201ENST00000264828 BCAS1O75363 584 aaPredicted RBP17.03■□□□□ 0.32
COL5A3-201ENST00000264828 WNT4P56705 351 aa17.03■□□□□ 0.32
COL5A3-201ENST00000264828 PTPRRQ15256 657 aa17.03■□□□□ 0.32
COL5A3-201ENST00000264828 CPOQ8IVL8 374 aa17.03■□□□□ 0.32
COL5A3-201ENST00000264828 ZNF695Q8IW36 515 aa17.03■□□□□ 0.32
COL5A3-201ENST00000264828 B3GNT3Q9Y2A9 372 aa17.03■□□□□ 0.32
COL5A3-201ENST00000264828 ARPC1BO15143 372 aaKnown RBP17.02■□□□□ 0.32
COL5A3-201ENST00000264828 IRF2P14316 349 aa17.02■□□□□ 0.32
COL5A3-201ENST00000264828 PSMB10P40306 273 aa17.02■□□□□ 0.32
COL5A3-201ENST00000264828 IDH3GP51553 393 aaPredicted RBP17.02■□□□□ 0.32
COL5A3-201ENST00000264828 FOXK1P85037 733 aa17.02■□□□□ 0.32
COL5A3-201ENST00000264828 SSX2Q16385 188 aa17.02■□□□□ 0.32
COL5A3-201ENST00000264828 TLDC1Q6P9B6 456 aa17.02■□□□□ 0.32
COL5A3-201ENST00000264828 DTWD1Q8N5C7 304 aa17.02■□□□□ 0.32
COL5A3-201ENST00000264828 BIN3Q9NQY0 253 aa17.02■□□□□ 0.32
COL5A3-201ENST00000264828 CREBZFQ9NS37 354 aa17.02■□□□□ 0.32
COL5A3-201ENST00000264828 ADAM18Q9Y3Q7 739 aa17.02■□□□□ 0.32
COL5A3-201ENST00000264828 ENPP4Q9Y6X5 453 aa17.02■□□□□ 0.32
COL5A3-201ENST00000264828 NUPL2O15504 423 aaKnown RBP17.02■□□□□ 0.32
COL5A3-201ENST00000264828 FRS3O43559 492 aa17.02■□□□□ 0.32
COL5A3-201ENST00000264828 DUX1O43812 170 aa17.02■□□□□ 0.32
COL5A3-201ENST00000264828 SOX9P48436 509 aa17.02■□□□□ 0.32
COL5A3-201ENST00000264828 P2RY14Q15391 338 aa17.02■□□□□ 0.32
COL5A3-201ENST00000264828 KIAA1211LQ6NV74 962 aa17.02■□□□□ 0.32
COL5A3-201ENST00000264828 LARP4Q71RC2 724 aaKnown RBP eCLIP17.02■□□□□ 0.32
COL5A3-201ENST00000264828 RBM12BQ8IXT5 1001 aaKnown RBP17.02■□□□□ 0.32
COL5A3-201ENST00000264828 SDR9C7Q8NEX9 313 aa17.02■□□□□ 0.32
COL5A3-201ENST00000264828 OR9A2Q8NGT5 310 aa17.02■□□□□ 0.32
COL5A3-201ENST00000264828 ADAMTS19Q8TE59 1207 aa17.02■□□□□ 0.32
COL5A3-201ENST00000264828 ARL11Q969Q4 196 aa17.02■□□□□ 0.32
COL5A3-201ENST00000264828 NPIPA5A0A0B4J1W7 369 aa17.02■□□□□ 0.32
COL5A3-201ENST00000264828 A8MVJ9 347 aa17.02■□□□□ 0.32
COL5A3-201ENST00000264828 NPIPA7E9PJI5 369 aa17.02■□□□□ 0.32
COL5A3-201ENST00000264828 TPPPO94811 219 aa17.02■□□□□ 0.32
COL5A3-201ENST00000264828 IFNA17P01571 189 aa17.02■□□□□ 0.32
COL5A3-201ENST00000264828 NPIPA8P0DM63 369 aa17.02■□□□□ 0.32
COL5A3-201ENST00000264828 RAB6AP20340 208 aa17.02■□□□□ 0.32
COL5A3-201ENST00000264828 CERS1P27544 350 aa17.02■□□□□ 0.32
COL5A3-201ENST00000264828 PSPHP78330 225 aa17.02■□□□□ 0.32
COL5A3-201ENST00000264828 ZNF440Q8IYI8 595 aa17.02■□□□□ 0.32
COL5A3-201ENST00000264828 FAM83FQ8NEG4 500 aaPredicted RBP17.02■□□□□ 0.32
COL5A3-201ENST00000264828 SYNPRQ8TBG9 265 aa17.02■□□□□ 0.32
COL5A3-201ENST00000264828 RAB7BQ96AH8 199 aa17.02■□□□□ 0.32
COL5A3-201ENST00000264828 LIN37Q96GY3 246 aaPredicted RBP17.02■□□□□ 0.32
COL5A3-201ENST00000264828 ANKRD60Q9BZ19 345 aa17.02■□□□□ 0.32
COL5A3-201ENST00000264828 ARHGAP39Q9C0H5 1083 aa17.02■□□□□ 0.32
COL5A3-201ENST00000264828 STRADBQ9C0K7 418 aa17.02■□□□□ 0.32
COL5A3-201ENST00000264828 B4GALT7Q9UBV7 327 aa17.02■□□□□ 0.32
COL5A3-201ENST00000264828 BAZ2AQ9UIF9 1905 aaKnown RBP17.02■□□□□ 0.31
COL5A3-201ENST00000264828 SLC10A3P09131 477 aa17.02■□□□□ 0.31
COL5A3-201ENST00000264828 NKX3-2P78367 333 aa17.02■□□□□ 0.31
COL5A3-201ENST00000264828 NKX6-1P78426 367 aaPredicted RBP17.02■□□□□ 0.31
COL5A3-201ENST00000264828 NFATC4Q14934 902 aa17.02■□□□□ 0.31
COL5A3-201ENST00000264828 NRG4Q8WWG1 115 aa17.02■□□□□ 0.31
COL5A3-201ENST00000264828 SLC30A3Q99726 388 aa17.02■□□□□ 0.31
COL5A3-201ENST00000264828 MT-ND4P03905 459 aa17.02■□□□□ 0.31
COL5A3-201ENST00000264828 PRSS3P35030 304 aa17.02■□□□□ 0.31
COL5A3-201ENST00000264828 SCAPQ12770 1279 aa17.02■□□□□ 0.31
COL5A3-201ENST00000264828 MFSD6LQ8IWD5 586 aa17.02■□□□□ 0.31
COL5A3-201ENST00000264828 UEVLDQ8IX04 471 aa17.02■□□□□ 0.31
COL5A3-201ENST00000264828 PRR22Q8IZ63 422 aa17.02■□□□□ 0.31
COL5A3-201ENST00000264828 SDSLQ96GA7 329 aa17.02■□□□□ 0.31
COL5A3-201ENST00000264828 SLC29A1Q99808 456 aa17.02■□□□□ 0.31
COL5A3-201ENST00000264828 PAPOLGQ9BWT3 736 aaKnown RBP17.02■□□□□ 0.31
COL5A3-201ENST00000264828 SORBS1Q9BX66 1292 aaKnown RBP17.02■□□□□ 0.31
COL5A3-201ENST00000264828 WDR6Q9NNW5 1121 aaKnown RBP17.02■□□□□ 0.31
COL5A3-201ENST00000264828 INTS6Q9UL03 887 aaKnown RBP17.02■□□□□ 0.31
COL5A3-201ENST00000264828 NUBP2Q9Y5Y2 271 aa17.02■□□□□ 0.31
COL5A3-201ENST00000264828 TCHHQ07283 1943 aa17.02■□□□□ 0.31
COL5A3-201ENST00000264828 HPGDSO60760 199 aa17.01■□□□□ 0.31
COL5A3-201ENST00000264828 AK1P00568 194 aa17.01■□□□□ 0.31
COL5A3-201ENST00000264828 ELOAQ14241 798 aaKnown RBP17.01■□□□□ 0.31
COL5A3-201ENST00000264828 SIX1Q15475 284 aaPredicted RBP17.01■□□□□ 0.31
COL5A3-201ENST00000264828 ZNF789Q5FWF6 425 aa17.01■□□□□ 0.31
COL5A3-201ENST00000264828 C6orf132Q5T0Z8 1188 aa17.01■□□□□ 0.31
COL5A3-201ENST00000264828 NOXA1Q86UR1 476 aa17.01■□□□□ 0.31
COL5A3-201ENST00000264828 OR5D16Q8NGK9 328 aa17.01■□□□□ 0.31
COL5A3-201ENST00000264828 ZFP90Q8TF47 636 aa17.01■□□□□ 0.31
COL5A3-201ENST00000264828 MTHFD2LQ9H903 347 aaPredicted RBP17.01■□□□□ 0.31
COL5A3-201ENST00000264828 THSD1Q9NS62 852 aa17.01■□□□□ 0.31
COL5A3-201ENST00000264828 ENPP5Q9UJA9 477 aa17.01■□□□□ 0.31
COL5A3-201ENST00000264828 ARPC4-TTLL3A0A0A6YYG9 625 aa17.01■□□□□ 0.31
COL5A3-201ENST00000264828 MPIG6BO95866 241 aa17.01■□□□□ 0.31
COL5A3-201ENST00000264828 PNMTP11086 282 aa17.01■□□□□ 0.31
COL5A3-201ENST00000264828 RAB4AP20338 218 aa17.01■□□□□ 0.31
COL5A3-201ENST00000264828 MEX3BQ6ZN04 569 aaKnown RBP17.01■□□□□ 0.31
COL5A3-201ENST00000264828 ZNF767PQ75MW2 155 aa17.01■□□□□ 0.31
COL5A3-201ENST00000264828 USP36Q9P275 1121 aaKnown RBP17.01■□□□□ 0.31
COL5A3-201ENST00000264828 APOBEC3BQ9UH17 382 aaKnown RBP17.01■□□□□ 0.31
COL5A3-201ENST00000264828 POLR2HP52434 150 aaKnown RBP17.01■□□□□ 0.31
COL5A3-201ENST00000264828 CAV3P56539 151 aa17.01■□□□□ 0.31
COL5A3-201ENST00000264828 RING1Q06587 406 aa17.01■□□□□ 0.31
COL5A3-201ENST00000264828 GRM7Q14831 915 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms