RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 CDC42P60953 191 aa13.35□□□□□ -0.27
SCARF1-201ENST00000263071 NCF4Q15080 339 aa13.35□□□□□ -0.27
SCARF1-201ENST00000263071 BMP8AQ7Z5Y6 402 aa13.35□□□□□ -0.27
SCARF1-201ENST00000263071 DDX53Q86TM3 631 aaKnown RBP13.35□□□□□ -0.27
SCARF1-201ENST00000263071 RBM45Q8IUH3 476 aaKnown RBP13.35□□□□□ -0.27
SCARF1-201ENST00000263071 CFAP206Q8IYR0 622 aa13.35□□□□□ -0.27
SCARF1-201ENST00000263071 AVL9Q8NBF6 648 aa13.35□□□□□ -0.27
SCARF1-201ENST00000263071 BEST4Q8NFU0 473 aa13.35□□□□□ -0.27
SCARF1-201ENST00000263071 AP3S1Q92572 193 aa13.35□□□□□ -0.27
SCARF1-201ENST00000263071 HS6ST2Q96MM7 605 aa13.35□□□□□ -0.27
SCARF1-201ENST00000263071 RIOK2Q9BVS4 552 aaKnown RBP13.35□□□□□ -0.27
SCARF1-201ENST00000263071 GPR52Q9Y2T5 361 aa13.35□□□□□ -0.27
SCARF1-201ENST00000263071 PIAS3Q9Y6X2 628 aa13.35□□□□□ -0.27
SCARF1-201ENST00000263071 ZNF236Q9UL36 1845 aa13.35□□□□□ -0.27
SCARF1-201ENST00000263071 SLC31A2O15432 143 aa13.35□□□□□ -0.27
SCARF1-201ENST00000263071 OIP5O43482 229 aa13.35□□□□□ -0.27
SCARF1-201ENST00000263071 EGFP01133 1207 aa13.35□□□□□ -0.27
SCARF1-201ENST00000263071 BCHEP06276 602 aa13.35□□□□□ -0.27
SCARF1-201ENST00000263071 NR0B1P51843 470 aaKnown RBP13.35□□□□□ -0.27
SCARF1-201ENST00000263071 B4GALNT1Q00973 533 aa13.35□□□□□ -0.27
SCARF1-201ENST00000263071 MLLT1Q03111 559 aaPredicted RBP13.35□□□□□ -0.27
SCARF1-201ENST00000263071 GK2Q14410 553 aaPredicted RBP13.35□□□□□ -0.27
SCARF1-201ENST00000263071 PTGES3Q15185 160 aaKnown RBP13.35□□□□□ -0.27
SCARF1-201ENST00000263071 RGNQ15493 299 aa13.35□□□□□ -0.27
SCARF1-201ENST00000263071 ACER2Q5QJU3 275 aa13.35□□□□□ -0.27
SCARF1-201ENST00000263071 AGTRAPQ6RW13 159 aa13.35□□□□□ -0.27
SCARF1-201ENST00000263071 TMEM107Q6UX40 140 aa13.35□□□□□ -0.27
SCARF1-201ENST00000263071 WASH2PQ6VEQ5 465 aa13.35□□□□□ -0.27
SCARF1-201ENST00000263071 B3GLCTQ6Y288 498 aa13.35□□□□□ -0.27
SCARF1-201ENST00000263071 TRIM46Q7Z4K8 759 aa13.35□□□□□ -0.27
SCARF1-201ENST00000263071 NPAS3Q8IXF0 933 aa13.35□□□□□ -0.27
SCARF1-201ENST00000263071 C9orf43Q8TAL5 461 aaPredicted RBP13.35□□□□□ -0.27
SCARF1-201ENST00000263071 CREB3L4Q8TEY5 395 aa13.35□□□□□ -0.27
SCARF1-201ENST00000263071 KIAA1143Q96AT1 154 aaPredicted RBP13.35□□□□□ -0.27
SCARF1-201ENST00000263071 MRPS24Q96EL2 167 aaKnown RBP13.35□□□□□ -0.27
SCARF1-201ENST00000263071 C11orf24Q96F05 449 aaPredicted RBP13.35□□□□□ -0.27
SCARF1-201ENST00000263071 CMTM7Q96FZ5 175 aa13.35□□□□□ -0.27
SCARF1-201ENST00000263071 SIGLEC11Q96RL6 698 aa13.35□□□□□ -0.27
SCARF1-201ENST00000263071 RHBGQ9H310 441 aa13.35□□□□□ -0.27
SCARF1-201ENST00000263071 MYOFQ9NZM1 2061 aa13.35□□□□□ -0.27
SCARF1-201ENST00000263071 ZNF197O14709 1029 aa13.35□□□□□ -0.27
SCARF1-201ENST00000263071 SEC14L5O43304 696 aa13.35□□□□□ -0.27
SCARF1-201ENST00000263071 IGLV3-27P01718 113 aa13.35□□□□□ -0.27
SCARF1-201ENST00000263071 MBP02144 154 aa13.35□□□□□ -0.27
SCARF1-201ENST00000263071 VAMP1P23763 118 aa13.35□□□□□ -0.27
SCARF1-201ENST00000263071 LAP3P28838 519 aa13.35□□□□□ -0.27
SCARF1-201ENST00000263071 DOC2BQ14184 412 aa13.35□□□□□ -0.27
SCARF1-201ENST00000263071 CD276Q5ZPR3 534 aa13.35□□□□□ -0.27
SCARF1-201ENST00000263071 ZNF613Q6PF04 617 aa13.35□□□□□ -0.27
SCARF1-201ENST00000263071 BBS4Q96RK4 519 aa13.35□□□□□ -0.27
SCARF1-201ENST00000263071 NTMT1Q9BV86 223 aa13.35□□□□□ -0.27
SCARF1-201ENST00000263071 ABCG5Q9H222 651 aa13.35□□□□□ -0.27
SCARF1-201ENST00000263071 BEX1Q9HBH7 125 aa13.35□□□□□ -0.27
SCARF1-201ENST00000263071 GREB1Q4ZG55 1949 aa13.34□□□□□ -0.27
SCARF1-201ENST00000263071 TCAPO15273 167 aa13.34□□□□□ -0.27
SCARF1-201ENST00000263071 TLX2O43763 284 aaPredicted RBP13.34□□□□□ -0.27
SCARF1-201ENST00000263071 POU4F2Q12837 409 aa13.34□□□□□ -0.27
SCARF1-201ENST00000263071 P2RY14Q15391 338 aa13.34□□□□□ -0.27
SCARF1-201ENST00000263071 CST9Q5W186 159 aa13.34□□□□□ -0.27
SCARF1-201ENST00000263071 C22orf42Q6IC83 251 aa13.34□□□□□ -0.27
SCARF1-201ENST00000263071 POMZP3Q6PJE2 187 aa13.34□□□□□ -0.27
SCARF1-201ENST00000263071 THAP6Q8TBB0 222 aa13.34□□□□□ -0.27
SCARF1-201ENST00000263071 CSGALNACT1Q8TDX6 532 aa13.34□□□□□ -0.27
SCARF1-201ENST00000263071 XAGE5Q8WWM1 108 aa13.34□□□□□ -0.27
SCARF1-201ENST00000263071 PPCDCQ96CD2 204 aa13.34□□□□□ -0.27
SCARF1-201ENST00000263071 ZDHHC3Q9NYG2 299 aa13.34□□□□□ -0.27
SCARF1-201ENST00000263071 NFKBIL1Q9UBC1 381 aaPredicted RBP13.34□□□□□ -0.27
SCARF1-201ENST00000263071 YIPF1Q9Y548 306 aa13.34□□□□□ -0.27
SCARF1-201ENST00000263071 QSOX1O00391 747 aa13.34□□□□□ -0.27
SCARF1-201ENST00000263071 ENTPD6O75354 484 aa13.34□□□□□ -0.27
SCARF1-201ENST00000263071 STX11O75558 287 aa13.34□□□□□ -0.27
SCARF1-201ENST00000263071 CTSCP53634 463 aa13.34□□□□□ -0.27
SCARF1-201ENST00000263071 TAS2R60P59551 318 aa13.34□□□□□ -0.27
SCARF1-201ENST00000263071 LSM11P83369 360 aaKnown RBP eCLIP13.34□□□□□ -0.27
SCARF1-201ENST00000263071 IFI44LQ53G44 452 aa13.34□□□□□ -0.27
SCARF1-201ENST00000263071 SETD7Q8WTS6 366 aaKnown RBP13.34□□□□□ -0.27
SCARF1-201ENST00000263071 SOCS4Q8WXH5 440 aa13.34□□□□□ -0.27
SCARF1-201ENST00000263071 KAT2AQ92830 837 aa13.34□□□□□ -0.27
SCARF1-201ENST00000263071 ARSGQ96EG1 525 aa13.34□□□□□ -0.27
SCARF1-201ENST00000263071 MACROD1Q9BQ69 325 aa13.34□□□□□ -0.27
SCARF1-201ENST00000263071 DOHHQ9BU89 302 aa13.34□□□□□ -0.27
SCARF1-201ENST00000263071 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.34□□□□□ -0.27
SCARF1-201ENST00000263071 METTL17Q9H7H0 456 aaPredicted RBP13.34□□□□□ -0.27
SCARF1-201ENST00000263071 SEC14L3Q9UDX4 400 aa13.34□□□□□ -0.27
SCARF1-201ENST00000263071 CA5BQ9Y2D0 317 aa13.34□□□□□ -0.27
SCARF1-201ENST00000263071 PCDHB11Q9Y5F2 797 aa13.34□□□□□ -0.27
SCARF1-201ENST00000263071 VEGFDO43915 354 aa13.33□□□□□ -0.27
SCARF1-201ENST00000263071 KHDRBS3O75525 346 aaKnown RBP13.33□□□□□ -0.27
SCARF1-201ENST00000263071 GASTP01350 101 aa13.33□□□□□ -0.27
SCARF1-201ENST00000263071 USF2Q15853 346 aaPredicted RBP13.33□□□□□ -0.27
SCARF1-201ENST00000263071 SLC5A12Q1EHB4 618 aa13.33□□□□□ -0.27
SCARF1-201ENST00000263071 ZNF385BQ569K4 471 aa13.33□□□□□ -0.27
SCARF1-201ENST00000263071 HSDL2Q6YN16 418 aa13.33□□□□□ -0.27
SCARF1-201ENST00000263071 CBLL1Q75N03 491 aa13.33□□□□□ -0.27
SCARF1-201ENST00000263071 SCARB1Q8WTV0 552 aa13.33□□□□□ -0.27
SCARF1-201ENST00000263071 TMEM41AQ96HV5 264 aa13.33□□□□□ -0.27
SCARF1-201ENST00000263071 RHOVQ96L33 236 aa13.33□□□□□ -0.27
SCARF1-201ENST00000263071 TGIF2Q9GZN2 237 aa13.33□□□□□ -0.27
SCARF1-201ENST00000263071 XKR8Q9H6D3 395 aa13.33□□□□□ -0.27
SCARF1-201ENST00000263071 MAGIXQ9H6Y5 334 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms