RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 M0R3G1 203 aa12.67□□□□□ -0.38
VMP1-201ENST00000262291 TBX1O43435 398 aa12.67□□□□□ -0.38
VMP1-201ENST00000262291 HNRNPCL4P0DMR1 293 aa12.67□□□□□ -0.38
VMP1-201ENST00000262291 ARFIP1P53367 373 aa12.67□□□□□ -0.38
VMP1-201ENST00000262291 CRISP1P54107 249 aa12.67□□□□□ -0.38
VMP1-201ENST00000262291 NNATQ16517 81 aa12.67□□□□□ -0.38
VMP1-201ENST00000262291 CTF1Q16619 201 aa12.67□□□□□ -0.38
VMP1-201ENST00000262291 AMZ1Q400G9 498 aa12.67□□□□□ -0.38
VMP1-201ENST00000262291 PRAMEF17Q5VTA0 474 aa12.67□□□□□ -0.38
VMP1-201ENST00000262291 ADCK1Q86TW2 530 aa12.67□□□□□ -0.38
VMP1-201ENST00000262291 MINDY2Q8NBR6 621 aa12.67□□□□□ -0.38
VMP1-201ENST00000262291 OR52P1PQ8NH57 321 aa12.67□□□□□ -0.38
VMP1-201ENST00000262291 COPS4Q9BT78 406 aa12.67□□□□□ -0.38
VMP1-201ENST00000262291 UCK2Q9BZX2 261 aa12.67□□□□□ -0.38
VMP1-201ENST00000262291 BCL2L10Q9HD36 194 aa12.67□□□□□ -0.38
VMP1-201ENST00000262291 DDX28Q9NUL7 540 aaKnown RBP12.67□□□□□ -0.38
VMP1-201ENST00000262291 SLC13A4Q9UKG4 626 aa12.67□□□□□ -0.38
VMP1-201ENST00000262291 MRPS17Q9Y2R5 130 aaKnown RBP12.67□□□□□ -0.38
VMP1-201ENST00000262291 MAU2Q9Y6X3 613 aa12.67□□□□□ -0.38
VMP1-201ENST00000262291 IGHV5-51A0A0C4DH38 117 aa12.66□□□□□ -0.38
VMP1-201ENST00000262291 GXYLT2A0PJZ3 443 aa12.66□□□□□ -0.38
VMP1-201ENST00000262291 E9PQ18 207 aa12.66□□□□□ -0.38
VMP1-201ENST00000262291 STSP08842 583 aa12.66□□□□□ -0.38
VMP1-201ENST00000262291 ADRA2AP08913 450 aa12.66□□□□□ -0.38
VMP1-201ENST00000262291 ZNF10P21506 573 aaPredicted RBP12.66□□□□□ -0.38
VMP1-201ENST00000262291 ANXA11P50995 505 aaKnown RBP12.66□□□□□ -0.38
VMP1-201ENST00000262291 TAS2R41P59536 307 aa12.66□□□□□ -0.38
VMP1-201ENST00000262291 BTG2P78543 158 aa12.66□□□□□ -0.38
VMP1-201ENST00000262291 MAPK14Q16539 360 aa12.66□□□□□ -0.38
VMP1-201ENST00000262291 ZNF628Q5EBL2 1059 aa12.66□□□□□ -0.38
VMP1-201ENST00000262291 FRRS1Q6ZNA5 592 aa12.66□□□□□ -0.38
VMP1-201ENST00000262291 USP53Q70EK8 1073 aa12.66□□□□□ -0.38
VMP1-201ENST00000262291 OR4K5Q8NGD3 323 aa12.66□□□□□ -0.38
VMP1-201ENST00000262291 RHOXF1Q8NHV9 184 aa12.66□□□□□ -0.38
VMP1-201ENST00000262291 RORBQ92753 470 aa12.66□□□□□ -0.38
VMP1-201ENST00000262291 GGHQ92820 318 aa12.66□□□□□ -0.38
VMP1-201ENST00000262291 ZNF566Q969W8 418 aa12.66□□□□□ -0.38
VMP1-201ENST00000262291 ANKRD9Q96BM1 317 aaPredicted RBP12.66□□□□□ -0.38
VMP1-201ENST00000262291 TXNDC15Q96J42 360 aa12.66□□□□□ -0.38
VMP1-201ENST00000262291 POLR2J3Q9H1A7 115 aaKnown RBP12.66□□□□□ -0.38
VMP1-201ENST00000262291 ANKHQ9HCJ1 492 aa12.66□□□□□ -0.38
VMP1-201ENST00000262291 SEMA4GQ9NTN9 838 aa12.66□□□□□ -0.38
VMP1-201ENST00000262291 MS4A12Q9NXJ0 267 aa12.66□□□□□ -0.38
VMP1-201ENST00000262291 REV1Q9UBZ9 1251 aa12.66□□□□□ -0.38
VMP1-201ENST00000262291 FTSJ1Q9UET6 329 aa12.66□□□□□ -0.38
VMP1-201ENST00000262291 SYNDIG1LA6NDD5 238 aa12.66□□□□□ -0.38
VMP1-201ENST00000262291 TGFBR3LH3BV60 316 aa12.66□□□□□ -0.38
VMP1-201ENST00000262291 PEX12O00623 359 aa12.66□□□□□ -0.38
VMP1-201ENST00000262291 CCNKO75909 580 aa12.66□□□□□ -0.38
VMP1-201ENST00000262291 GPR75O95800 540 aa12.66□□□□□ -0.38
VMP1-201ENST00000262291 GKN3PP0CG01 181 aa12.66□□□□□ -0.38
VMP1-201ENST00000262291 PRKACBP22694 351 aa12.66□□□□□ -0.38
VMP1-201ENST00000262291 CD40LGP29965 261 aa12.66□□□□□ -0.38
VMP1-201ENST00000262291 CASP3P42574 277 aa12.66□□□□□ -0.38
VMP1-201ENST00000262291 LYPD8Q6UX82 237 aa12.66□□□□□ -0.38
VMP1-201ENST00000262291 PTCHD4Q6ZW05 846 aa12.66□□□□□ -0.38
VMP1-201ENST00000262291 ZER1Q7Z7L7 766 aa12.66□□□□□ -0.38
VMP1-201ENST00000262291 ZAR1Q86SH2 424 aa12.66□□□□□ -0.38
VMP1-201ENST00000262291 OR2L13Q8N349 312 aa12.66□□□□□ -0.38
VMP1-201ENST00000262291 ZNF655Q8N720 491 aaPredicted RBP12.66□□□□□ -0.38
VMP1-201ENST00000262291 GPR151Q8TDV0 419 aa12.66□□□□□ -0.38
VMP1-201ENST00000262291 MOAP1Q96BY2 351 aa12.66□□□□□ -0.38
VMP1-201ENST00000262291 DACH2Q96NX9 599 aa12.66□□□□□ -0.38
VMP1-201ENST00000262291 DNAJC27Q9NZQ0 273 aa12.66□□□□□ -0.38
VMP1-201ENST00000262291 WDR45Q9Y484 360 aa12.66□□□□□ -0.38
VMP1-201ENST00000262291 HSPE1-MOB4S4R3N1 261 aa12.66□□□□□ -0.38
VMP1-201ENST00000262291 FAM221BA6H8Z2 402 aa12.65□□□□□ -0.38
VMP1-201ENST00000262291 DYRK3O43781 588 aa12.65□□□□□ -0.38
VMP1-201ENST00000262291 OR10H2O60403 315 aa12.65□□□□□ -0.38
VMP1-201ENST00000262291 MMP11P24347 488 aa12.65□□□□□ -0.38
VMP1-201ENST00000262291 UGT2B15P54855 530 aa12.65□□□□□ -0.38
VMP1-201ENST00000262291 MRPS15P82914 257 aaKnown RBP12.65□□□□□ -0.38
VMP1-201ENST00000262291 DBPQ10586 325 aaPredicted RBP12.65□□□□□ -0.38
VMP1-201ENST00000262291 DESI1Q6ICB0 168 aa12.65□□□□□ -0.38
VMP1-201ENST00000262291 CDC73Q6P1J9 531 aa12.65□□□□□ -0.38
VMP1-201ENST00000262291 GKN2Q86XP6 184 aa12.65□□□□□ -0.38
VMP1-201ENST00000262291 RASSF5Q8WWW0 418 aa12.65□□□□□ -0.38
VMP1-201ENST00000262291 CNDP2Q96KP4 475 aaKnown RBP12.65□□□□□ -0.38
VMP1-201ENST00000262291 DMRTB1Q96MA1 342 aa12.65□□□□□ -0.38
VMP1-201ENST00000262291 SPRTNQ9H040 489 aaPredicted RBP12.65□□□□□ -0.38
VMP1-201ENST00000262291 MOV10Q9HCE1 1003 aaKnown RBP12.65□□□□□ -0.38
VMP1-201ENST00000262291 LYRM4Q9HD34 91 aa12.65□□□□□ -0.38
VMP1-201ENST00000262291 FSCN3Q9NQT6 498 aa12.65□□□□□ -0.38
VMP1-201ENST00000262291 CNIH4Q9P003 139 aa12.65□□□□□ -0.38
VMP1-201ENST00000262291 RABL2AQ9UBK7 228 aaPredicted RBP12.65□□□□□ -0.38
VMP1-201ENST00000262291 SPACA6W5XKT8 324 aa12.65□□□□□ -0.38
VMP1-201ENST00000262291 FAAHO00519 579 aa12.65□□□□□ -0.38
VMP1-201ENST00000262291 PRG2P13727 222 aa12.65□□□□□ -0.38
VMP1-201ENST00000262291 IFNA8P32881 189 aa12.65□□□□□ -0.38
VMP1-201ENST00000262291 GABRA3P34903 492 aa12.65□□□□□ -0.38
VMP1-201ENST00000262291 CAPZBP47756 277 aa12.65□□□□□ -0.38
VMP1-201ENST00000262291 OR1D5P58170 312 aa12.65□□□□□ -0.38
VMP1-201ENST00000262291 PUS10Q3MIT2 529 aaKnown RBP12.65□□□□□ -0.38
VMP1-201ENST00000262291 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.65□□□□□ -0.38
VMP1-201ENST00000262291 TYW3Q6IPR3 259 aaKnown RBP12.65□□□□□ -0.38
VMP1-201ENST00000262291 DNAJC22Q8N4W6 341 aa12.65□□□□□ -0.38
VMP1-201ENST00000262291 ZNF614Q8N883 585 aa12.65□□□□□ -0.38
VMP1-201ENST00000262291 RPL3LQ92901 407 aaKnown RBP12.65□□□□□ -0.38
VMP1-201ENST00000262291 TRNT1Q96Q11 434 aaKnown RBP12.65□□□□□ -0.38
VMP1-201ENST00000262291 SPATA5L1Q9BVQ7 753 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms