RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 RPS26P11Q5JNZ5 115 aaPredicted RBP25.44■■□□□ 1.66
SMARCD3-201ENST00000262188 EXOSC6Q5RKV6 272 aaKnown RBP25.44■■□□□ 1.66
SMARCD3-201ENST00000262188 LPCAT4Q643R3 524 aa25.44■■□□□ 1.66
SMARCD3-201ENST00000262188 HMGN2P46Q86SG4 172 aa25.44■■□□□ 1.66
SMARCD3-201ENST00000262188 LGI4Q8N135 537 aa25.44■■□□□ 1.66
SMARCD3-201ENST00000262188 CDRT4Q8N9R6 151 aa25.44■■□□□ 1.66
SMARCD3-201ENST00000262188 VMP1Q96GC9 406 aa25.44■■□□□ 1.66
SMARCD3-201ENST00000262188 NXF5Q9H1B4 397 aaKnown RBP25.44■■□□□ 1.66
SMARCD3-201ENST00000262188 FBXO34Q9NWN3 711 aa25.44■■□□□ 1.66
SMARCD3-201ENST00000262188 IFT52Q9Y366 437 aa25.44■■□□□ 1.66
SMARCD3-201ENST00000262188 SYNDIG1LA6NDD5 238 aa25.43■■□□□ 1.66
SMARCD3-201ENST00000262188 EFSO43281 561 aa25.43■■□□□ 1.66
SMARCD3-201ENST00000262188 BCAS2O75934 225 aaPredicted RBP25.43■■□□□ 1.66
SMARCD3-201ENST00000262188 BCHEP06276 602 aa25.43■■□□□ 1.66
SMARCD3-201ENST00000262188 ME2P23368 584 aa25.43■■□□□ 1.66
SMARCD3-201ENST00000262188 AQP1P29972 269 aa25.43■■□□□ 1.66
SMARCD3-201ENST00000262188 RNF4P78317 190 aa25.43■■□□□ 1.66
SMARCD3-201ENST00000262188 RAB43Q86YS6 212 aa25.43■■□□□ 1.66
SMARCD3-201ENST00000262188 ANKFN1Q8N957 763 aa25.43■■□□□ 1.66
SMARCD3-201ENST00000262188 WWTR1Q9GZV5 400 aa25.43■■□□□ 1.66
SMARCD3-201ENST00000262188 RAD21L1Q9H4I0 556 aa25.43■■□□□ 1.66
SMARCD3-201ENST00000262188 FAM220BPB1ANY3 271 aa25.42■■□□□ 1.66
SMARCD3-201ENST00000262188 ALOX5P09917 674 aa25.42■■□□□ 1.66
SMARCD3-201ENST00000262188 HSD17B1P14061 328 aa25.42■■□□□ 1.66
SMARCD3-201ENST00000262188 RFX3P48380 749 aa25.42■■□□□ 1.66
SMARCD3-201ENST00000262188 FAM209AQ5JX71 171 aa25.42■■□□□ 1.66
SMARCD3-201ENST00000262188 C6orf183Q5T699 404 aa25.42■■□□□ 1.66
SMARCD3-201ENST00000262188 HSDL2Q6YN16 418 aa25.42■■□□□ 1.66
SMARCD3-201ENST00000262188 PRR22Q8IZ63 422 aa25.42■■□□□ 1.66
SMARCD3-201ENST00000262188 SLC38A5Q8WUX1 472 aa25.42■■□□□ 1.66
SMARCD3-201ENST00000262188 ADIPOR1Q96A54 375 aa25.42■■□□□ 1.66
SMARCD3-201ENST00000262188 REXO5Q96IC2 774 aaKnown RBP25.42■■□□□ 1.66
SMARCD3-201ENST00000262188 LMF2Q9BU23 707 aaKnown RBP25.42■■□□□ 1.66
SMARCD3-201ENST00000262188 PRODH2Q9UF12 536 aa25.42■■□□□ 1.66
SMARCD3-201ENST00000262188 C2orf92A0A1B0GVN3 265 aa25.42■■□□□ 1.66
SMARCD3-201ENST00000262188 A0A1W2PQ72 361 aa25.42■■□□□ 1.66
SMARCD3-201ENST00000262188 A8MVJ9 347 aa25.42■■□□□ 1.66
SMARCD3-201ENST00000262188 CENPBD1B2RD01 187 aa25.42■■□□□ 1.66
SMARCD3-201ENST00000262188 KCTD21Q4G0X4 260 aa25.42■■□□□ 1.66
SMARCD3-201ENST00000262188 FCRLBQ6BAA4 426 aa25.42■■□□□ 1.66
SMARCD3-201ENST00000262188 FIGNL1Q6PIW4 674 aa25.42■■□□□ 1.66
SMARCD3-201ENST00000262188 MICU2Q8IYU8 434 aa25.42■■□□□ 1.66
SMARCD3-201ENST00000262188 RMND5BQ96G75 393 aaPredicted RBP25.42■■□□□ 1.66
SMARCD3-201ENST00000262188 ELOVL7A1L3X0 281 aa25.41■■□□□ 1.66
SMARCD3-201ENST00000262188 TMEM200CA6NKL6 621 aa25.41■■□□□ 1.66
SMARCD3-201ENST00000262188 ITGAMP11215 1152 aa25.41■■□□□ 1.66
SMARCD3-201ENST00000262188 BMP2P12643 396 aa25.41■■□□□ 1.66
SMARCD3-201ENST00000262188 CHAF1BQ13112 559 aa25.41■■□□□ 1.66
SMARCD3-201ENST00000262188 RGS21Q2M5E4 152 aa25.41■■□□□ 1.66
SMARCD3-201ENST00000262188 VMACQ2NL98 169 aa25.41■■□□□ 1.66
SMARCD3-201ENST00000262188 PLAG1Q6DJT9 500 aa25.41■■□□□ 1.66
SMARCD3-201ENST00000262188 SLC29A4Q7RTT9 530 aa25.41■■□□□ 1.66
SMARCD3-201ENST00000262188 COX18Q8N8Q8 333 aa25.41■■□□□ 1.66
SMARCD3-201ENST00000262188 ELP5Q8TE02 316 aa25.41■■□□□ 1.66
SMARCD3-201ENST00000262188 TMEM19Q96HH6 336 aa25.41■■□□□ 1.66
SMARCD3-201ENST00000262188 MED30Q96HR3 178 aa25.41■■□□□ 1.66
SMARCD3-201ENST00000262188 PIGUQ9H490 435 aa25.41■■□□□ 1.66
SMARCD3-201ENST00000262188 RUBCNLQ9H714 662 aa25.41■■□□□ 1.66
SMARCD3-201ENST00000262188 CRNNQ9UBG3 495 aaPredicted RBP25.41■■□□□ 1.66
SMARCD3-201ENST00000262188 GPR55Q9Y2T6 319 aaPredicted RBP25.41■■□□□ 1.66
SMARCD3-201ENST00000262188 MED19A0JLT2 244 aaPredicted RBP25.4■■□□□ 1.66
SMARCD3-201ENST00000262188 H0YJX3 145 aa25.4■■□□□ 1.66
SMARCD3-201ENST00000262188 MTRF1O75570 445 aaKnown RBP25.4■■□□□ 1.66
SMARCD3-201ENST00000262188 NKX2-2O95096 273 aa25.4■■□□□ 1.66
SMARCD3-201ENST00000262188 TFPTP0C1Z6 253 aa25.4■■□□□ 1.66
SMARCD3-201ENST00000262188 ATP6V1B1P15313 513 aa25.4■■□□□ 1.66
SMARCD3-201ENST00000262188 NR0B1P51843 470 aaKnown RBP25.4■■□□□ 1.66
SMARCD3-201ENST00000262188 ANKDD1AQ495B1 522 aa25.4■■□□□ 1.66
SMARCD3-201ENST00000262188 ZNF248Q8NDW4 579 aa25.4■■□□□ 1.66
SMARCD3-201ENST00000262188 FIG4Q92562 907 aa25.4■■□□□ 1.66
SMARCD3-201ENST00000262188 HOXB13Q92826 284 aaPredicted RBP25.4■■□□□ 1.66
SMARCD3-201ENST00000262188 POMPQ9Y244 141 aa25.4■■□□□ 1.66
SMARCD3-201ENST00000262188 CACNA1AO00555 2505 aa25.4■■□□□ 1.66
SMARCD3-201ENST00000262188 ANKRD34BA5PLL1 514 aa25.4■■□□□ 1.66
SMARCD3-201ENST00000262188 WWP2O00308 870 aa25.4■■□□□ 1.66
SMARCD3-201ENST00000262188 PEX12O00623 359 aa25.4■■□□□ 1.66
SMARCD3-201ENST00000262188 KPNA4O00629 521 aaPredicted RBP25.4■■□□□ 1.66
SMARCD3-201ENST00000262188 IDH3BO43837 385 aa25.4■■□□□ 1.66
SMARCD3-201ENST00000262188 SLC28A2O43868 658 aa25.4■■□□□ 1.66
SMARCD3-201ENST00000262188 MAN1A2O60476 641 aa25.4■■□□□ 1.66
SMARCD3-201ENST00000262188 ZNF354AO60765 605 aaPredicted RBP25.4■■□□□ 1.66
SMARCD3-201ENST00000262188 ZIC2O95409 532 aaPredicted RBP25.4■■□□□ 1.66
SMARCD3-201ENST00000262188 HPP00738 406 aa25.4■■□□□ 1.66
SMARCD3-201ENST00000262188 CHRM4P08173 479 aa25.4■■□□□ 1.66
SMARCD3-201ENST00000262188 ARAFP10398 606 aa25.4■■□□□ 1.66
SMARCD3-201ENST00000262188 SCARB2Q14108 478 aa25.4■■□□□ 1.66
SMARCD3-201ENST00000262188 ZNHIT3Q15649 155 aaPredicted RBP25.4■■□□□ 1.66
SMARCD3-201ENST00000262188 MOGQ16653 247 aa25.4■■□□□ 1.66
SMARCD3-201ENST00000262188 CYP2R1Q6VVX0 501 aa25.4■■□□□ 1.66
SMARCD3-201ENST00000262188 ZAR1Q86SH2 424 aa25.4■■□□□ 1.66
SMARCD3-201ENST00000262188 SPERTQ8NA61 448 aa25.4■■□□□ 1.66
SMARCD3-201ENST00000262188 CCDC86Q9H6F5 360 aaKnown RBP25.4■■□□□ 1.66
SMARCD3-201ENST00000262188 CNOT11Q9UKZ1 510 aaKnown RBP25.4■■□□□ 1.66
SMARCD3-201ENST00000262188 PCDH17O14917 1159 aa25.39■■□□□ 1.66
SMARCD3-201ENST00000262188 IGKV1D-16P01601 117 aa25.39■■□□□ 1.66
SMARCD3-201ENST00000262188 NR2F1P10589 423 aa25.39■■□□□ 1.66
SMARCD3-201ENST00000262188 CDK6Q00534 326 aa25.39■■□□□ 1.66
SMARCD3-201ENST00000262188 EXT1Q16394 746 aa25.39■■□□□ 1.66
SMARCD3-201ENST00000262188 GRAMD1BQ3KR37 738 aa25.39■■□□□ 1.66
SMARCD3-201ENST00000262188 GPAT3Q53EU6 434 aa25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms