RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 SLC28A1O00337 649 aa17.18■□□□□ 0.34
TM6SF1-201ENST00000258909 SEC14L5O43304 696 aa17.18■□□□□ 0.34
TM6SF1-201ENST00000258909 RGS14O43566 566 aa17.18■□□□□ 0.34
TM6SF1-201ENST00000258909 HCRTR2O43614 444 aa17.18■□□□□ 0.34
TM6SF1-201ENST00000258909 TNFSF13O75888 250 aa17.18■□□□□ 0.34
TM6SF1-201ENST00000258909 IGKV1D-16P01601 117 aa17.18■□□□□ 0.34
TM6SF1-201ENST00000258909 LINC00032P0C843 101 aa17.18■□□□□ 0.34
TM6SF1-201ENST00000258909 PRPH2P23942 346 aa17.18■□□□□ 0.34
TM6SF1-201ENST00000258909 GPC1P35052 558 aa17.18■□□□□ 0.34
TM6SF1-201ENST00000258909 SUCLG1P53597 346 aaKnown RBP17.18■□□□□ 0.34
TM6SF1-201ENST00000258909 PRKAG1P54619 331 aa17.18■□□□□ 0.34
TM6SF1-201ENST00000258909 CLDN15P56746 228 aa17.18■□□□□ 0.34
TM6SF1-201ENST00000258909 SLC18A2Q05940 514 aa17.18■□□□□ 0.34
TM6SF1-201ENST00000258909 PCLAFQ15004 111 aa17.18■□□□□ 0.34
TM6SF1-201ENST00000258909 CHMP1BQ7LBR1 199 aa17.18■□□□□ 0.34
TM6SF1-201ENST00000258909 EIF1ADQ8N9N8 165 aaKnown RBP17.18■□□□□ 0.34
TM6SF1-201ENST00000258909 OR2W6PQ8NHA6 318 aa17.18■□□□□ 0.34
TM6SF1-201ENST00000258909 FBXO30Q8TB52 745 aa17.18■□□□□ 0.34
TM6SF1-201ENST00000258909 TSSK3Q96PN8 268 aa17.18■□□□□ 0.34
TM6SF1-201ENST00000258909 YIPF4Q9BSR8 244 aa17.18■□□□□ 0.34
TM6SF1-201ENST00000258909 CXXC4Q9H2H0 198 aa17.18■□□□□ 0.34
TM6SF1-201ENST00000258909 SDHAF3Q9NRP4 125 aa17.18■□□□□ 0.34
TM6SF1-201ENST00000258909 FAM120CQ9NX05 1096 aaKnown RBP17.18■□□□□ 0.34
TM6SF1-201ENST00000258909 FLNAP21333 2647 aaKnown RBP17.17■□□□□ 0.34
TM6SF1-201ENST00000258909 A0A1W2PNV4 684 aa17.17■□□□□ 0.34
TM6SF1-201ENST00000258909 PDPK1O15530 556 aa17.17■□□□□ 0.34
TM6SF1-201ENST00000258909 UTS2O95399 124 aa17.17■□□□□ 0.34
TM6SF1-201ENST00000258909 SDC1P18827 310 aa17.17■□□□□ 0.34
TM6SF1-201ENST00000258909 EFNA1P20827 205 aaPredicted RBP17.17■□□□□ 0.34
TM6SF1-201ENST00000258909 CPOXP36551 454 aa17.17■□□□□ 0.34
TM6SF1-201ENST00000258909 RPL38P63173 70 aaKnown RBP17.17■□□□□ 0.34
TM6SF1-201ENST00000258909 BCL2A1Q16548 175 aa17.17■□□□□ 0.34
TM6SF1-201ENST00000258909 RFTN2Q52LD8 501 aaPredicted RBP17.17■□□□□ 0.34
TM6SF1-201ENST00000258909 APOOLQ6UXV4 268 aa17.17■□□□□ 0.34
TM6SF1-201ENST00000258909 SZRD1Q7Z422 152 aa17.17■□□□□ 0.34
TM6SF1-201ENST00000258909 CNEP1R1Q8N9A8 125 aa17.17■□□□□ 0.34
TM6SF1-201ENST00000258909 GPR151Q8TDV0 419 aa17.17■□□□□ 0.34
TM6SF1-201ENST00000258909 FIG4Q92562 907 aa17.17■□□□□ 0.34
TM6SF1-201ENST00000258909 ACBD3Q9H3P7 528 aa17.17■□□□□ 0.34
TM6SF1-201ENST00000258909 MRTO4Q9UKD2 239 aaKnown RBP17.17■□□□□ 0.34
TM6SF1-201ENST00000258909 PACSIN3Q9UKS6 424 aa17.17■□□□□ 0.34
TM6SF1-201ENST00000258909 ABCG2Q9UNQ0 655 aa17.17■□□□□ 0.34
TM6SF1-201ENST00000258909 OR2M5A3KFT3 312 aa17.16■□□□□ 0.34
TM6SF1-201ENST00000258909 SLC22A20A6NK97 555 aa17.16■□□□□ 0.34
TM6SF1-201ENST00000258909 A8MXE2 369 aa17.16■□□□□ 0.34
TM6SF1-201ENST00000258909 TMEM233B4DJY2 109 aa17.16■□□□□ 0.34
TM6SF1-201ENST00000258909 SHISA8B8ZZ34 492 aa17.16■□□□□ 0.34
TM6SF1-201ENST00000258909 H3BML4 177 aa17.16■□□□□ 0.34
TM6SF1-201ENST00000258909 SMNDC1O75940 238 aaKnown RBP eCLIP17.16■□□□□ 0.34
TM6SF1-201ENST00000258909 PRPS2P11908 318 aa17.16■□□□□ 0.34
TM6SF1-201ENST00000258909 PEPDP12955 493 aa17.16■□□□□ 0.34
TM6SF1-201ENST00000258909 CD99P14209 185 aa17.16■□□□□ 0.34
TM6SF1-201ENST00000258909 CLK3P49761 638 aaKnown RBP17.16■□□□□ 0.34
TM6SF1-201ENST00000258909 CLDN20P56880 219 aa17.16■□□□□ 0.34
TM6SF1-201ENST00000258909 GRAMD1BQ3KR37 738 aa17.16■□□□□ 0.34
TM6SF1-201ENST00000258909 GALNTL6Q49A17 601 aa17.16■□□□□ 0.34
TM6SF1-201ENST00000258909 VWA1Q6PCB0 445 aa17.16■□□□□ 0.34
TM6SF1-201ENST00000258909 MEIOBQ8N635 442 aa17.16■□□□□ 0.34
TM6SF1-201ENST00000258909 SMPDL3BQ92485 455 aa17.16■□□□□ 0.34
TM6SF1-201ENST00000258909 PPCDCQ96CD2 204 aa17.16■□□□□ 0.34
TM6SF1-201ENST00000258909 TRIM44Q96DX7 344 aaPredicted RBP17.16■□□□□ 0.34
TM6SF1-201ENST00000258909 METTL2AQ96IZ6 378 aaKnown RBP17.16■□□□□ 0.34
TM6SF1-201ENST00000258909 TMUB1Q9BVT8 246 aa17.16■□□□□ 0.34
TM6SF1-201ENST00000258909 TBL1XR1Q9BZK7 514 aa17.16■□□□□ 0.34
TM6SF1-201ENST00000258909 PIGMQ9H3S5 423 aa17.16■□□□□ 0.34
TM6SF1-201ENST00000258909 REEP4Q9H6H4 257 aa17.16■□□□□ 0.34
TM6SF1-201ENST00000258909 PTGES2Q9H7Z7 377 aa17.16■□□□□ 0.34
TM6SF1-201ENST00000258909 PPCSQ9HAB8 311 aa17.16■□□□□ 0.34
TM6SF1-201ENST00000258909 SH3BP4Q9P0V3 963 aa17.16■□□□□ 0.34
TM6SF1-201ENST00000258909 DNAJC15Q9Y5T4 150 aa17.16■□□□□ 0.34
TM6SF1-201ENST00000258909 NIPBLQ6KC79 2804 aaeCLIP17.16■□□□□ 0.34
TM6SF1-201ENST00000258909 SH3D21A4FU49 640 aa17.15■□□□□ 0.34
TM6SF1-201ENST00000258909 TRIM13O60858 407 aa17.15■□□□□ 0.34
TM6SF1-201ENST00000258909 KCNH1O95259 989 aa17.15■□□□□ 0.34
TM6SF1-201ENST00000258909 ANGPTL1O95841 491 aa17.15■□□□□ 0.34
TM6SF1-201ENST00000258909 CHRNGP07510 517 aa17.15■□□□□ 0.34
TM6SF1-201ENST00000258909 PSMD4P55036 377 aaKnown RBP17.15■□□□□ 0.34
TM6SF1-201ENST00000258909 SIRPAP78324 504 aa17.15■□□□□ 0.34
TM6SF1-201ENST00000258909 KANK2Q63ZY3 851 aa17.15■□□□□ 0.34
TM6SF1-201ENST00000258909 PAMR1Q6UXH9 720 aa17.15■□□□□ 0.34
TM6SF1-201ENST00000258909 SLC9A6Q92581 669 aa17.15■□□□□ 0.34
TM6SF1-201ENST00000258909 STARD4Q96DR4 205 aa17.15■□□□□ 0.34
TM6SF1-201ENST00000258909 C1GALT1C1Q96EU7 318 aa17.15■□□□□ 0.34
TM6SF1-201ENST00000258909 OTUB1Q96FW1 271 aaPredicted RBP17.15■□□□□ 0.34
TM6SF1-201ENST00000258909 ZNF845Q96IR2 970 aaPredicted RBP17.15■□□□□ 0.34
TM6SF1-201ENST00000258909 FCRL1Q96LA6 429 aa17.15■□□□□ 0.34
TM6SF1-201ENST00000258909 CCT7Q99832 543 aa17.15■□□□□ 0.34
TM6SF1-201ENST00000258909 PINK1Q9BXM7 581 aa17.15■□□□□ 0.34
TM6SF1-201ENST00000258909 C3orf14Q9HBI5 128 aa17.15■□□□□ 0.34
TM6SF1-201ENST00000258909 GIMAP2Q9UG22 337 aa17.15■□□□□ 0.34
TM6SF1-201ENST00000258909 NPIPB8E9PQR5 432 aa17.14■□□□□ 0.33
TM6SF1-201ENST00000258909 ALDH3A1P30838 453 aa17.14■□□□□ 0.33
TM6SF1-201ENST00000258909 DIO3P55073 304 aa17.14■□□□□ 0.33
TM6SF1-201ENST00000258909 MANFP55145 182 aaKnown RBP17.14■□□□□ 0.33
TM6SF1-201ENST00000258909 FAM27E3Q08E93 113 aa17.14■□□□□ 0.33
TM6SF1-201ENST00000258909 GANABQ14697 944 aaKnown RBP17.14■□□□□ 0.33
TM6SF1-201ENST00000258909 TGIF2LYQ8IUE0 185 aa17.14■□□□□ 0.33
TM6SF1-201ENST00000258909 DDIASQ8IXT1 998 aa17.14■□□□□ 0.33
TM6SF1-201ENST00000258909 CHDHQ8NE62 594 aaPredicted RBP17.14■□□□□ 0.33
TM6SF1-201ENST00000258909 NUP43Q8NFH3 380 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms