RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 CD300LDQ6UXZ3 194 aa25.72■■□□□ 1.71
CCM2-201ENST00000258781 MORN4Q8NDC4 146 aa25.72■■□□□ 1.71
CCM2-201ENST00000258781 ZNF420Q8TAQ5 688 aaPredicted RBP25.72■■□□□ 1.71
CCM2-201ENST00000258781 DIO2Q92813 273 aa25.72■■□□□ 1.71
CCM2-201ENST00000258781 MVB12AQ96EY5 273 aa25.72■■□□□ 1.71
CCM2-201ENST00000258781 SLC41A2Q96JW4 573 aa25.72■■□□□ 1.71
CCM2-201ENST00000258781 ZNF578Q96N58 590 aaPredicted RBP25.72■■□□□ 1.71
CCM2-201ENST00000258781 PELOQ9BRX2 385 aaKnown RBP25.72■■□□□ 1.71
CCM2-201ENST00000258781 PLCXD1Q9NUJ7 323 aa25.72■■□□□ 1.71
CCM2-201ENST00000258781 TMEM9Q9P0T7 183 aa25.72■■□□□ 1.71
CCM2-201ENST00000258781 TMEM150CB9EJG8 249 aa25.72■■□□□ 1.71
CCM2-201ENST00000258781 SEC14L2O76054 403 aa25.72■■□□□ 1.71
CCM2-201ENST00000258781 GUSBP08236 651 aa25.72■■□□□ 1.71
CCM2-201ENST00000258781 CCNYL3P0C7X3 344 aa25.72■■□□□ 1.71
CCM2-201ENST00000258781 MSL3P1P0C860 447 aa25.72■■□□□ 1.71
CCM2-201ENST00000258781 ITIH1P19827 911 aa25.72■■□□□ 1.71
CCM2-201ENST00000258781 GABRA3P34903 492 aa25.72■■□□□ 1.71
CCM2-201ENST00000258781 IDH2P48735 452 aaKnown RBP25.72■■□□□ 1.71
CCM2-201ENST00000258781 SEPHS1P49903 392 aa25.72■■□□□ 1.71
CCM2-201ENST00000258781 CDC42P60953 191 aa25.72■■□□□ 1.71
CCM2-201ENST00000258781 GPR68Q15743 365 aa25.72■■□□□ 1.71
CCM2-201ENST00000258781 SMN1Q16637 294 aaKnown RBP25.72■■□□□ 1.71
CCM2-201ENST00000258781 PERM1Q5SV97 790 aa25.72■■□□□ 1.71
CCM2-201ENST00000258781 P3H2Q8IVL5 708 aa25.72■■□□□ 1.71
CCM2-201ENST00000258781 OR4K5Q8NGD3 323 aa25.72■■□□□ 1.71
CCM2-201ENST00000258781 TMEM184BQ9Y519 407 aaPredicted RBP25.72■■□□□ 1.71
CCM2-201ENST00000258781 CPED1A4D0V7 1026 aa25.71■■□□□ 1.71
CCM2-201ENST00000258781 AP3D1O14617 1153 aa25.71■■□□□ 1.71
CCM2-201ENST00000258781 GALNSP34059 522 aa25.71■■□□□ 1.71
CCM2-201ENST00000258781 PIGFQ07326 219 aa25.71■■□□□ 1.71
CCM2-201ENST00000258781 COX10Q12887 443 aa25.71■■□□□ 1.71
CCM2-201ENST00000258781 TRAM2Q15035 370 aa25.71■■□□□ 1.71
CCM2-201ENST00000258781 ZNHIT3Q15649 155 aaPredicted RBP25.71■■□□□ 1.71
CCM2-201ENST00000258781 MED25Q71SY5 747 aa25.71■■□□□ 1.71
CCM2-201ENST00000258781 METTL27Q8N6F8 245 aaPredicted RBP25.71■■□□□ 1.71
CCM2-201ENST00000258781 SLC38A4Q969I6 547 aa25.71■■□□□ 1.71
CCM2-201ENST00000258781 FOLH1BQ9HBA9 442 aa25.71■■□□□ 1.71
CCM2-201ENST00000258781 IMPAD1Q9NX62 359 aa25.71■■□□□ 1.71
CCM2-201ENST00000258781 ZNF226Q9NYT6 803 aa25.71■■□□□ 1.71
CCM2-201ENST00000258781 FRS3O43559 492 aa25.7■■□□□ 1.71
CCM2-201ENST00000258781 AHCYL1O43865 530 aa25.7■■□□□ 1.71
CCM2-201ENST00000258781 TPST2O60704 377 aa25.7■■□□□ 1.71
CCM2-201ENST00000258781 CDC123O75794 336 aaPredicted RBP25.7■■□□□ 1.71
CCM2-201ENST00000258781 CYP7B1O75881 506 aa25.7■■□□□ 1.71
CCM2-201ENST00000258781 GABRB1P18505 474 aa25.7■■□□□ 1.71
CCM2-201ENST00000258781 PCMT1P22061 227 aa25.7■■□□□ 1.71
CCM2-201ENST00000258781 DCKP27707 260 aa25.7■■□□□ 1.71
CCM2-201ENST00000258781 BTG2P78543 158 aa25.7■■□□□ 1.71
CCM2-201ENST00000258781 ST3GAL3Q11203 375 aa25.7■■□□□ 1.71
CCM2-201ENST00000258781 TARDBPQ13148 414 aaKnown RBP eCLIP25.7■■□□□ 1.71
CCM2-201ENST00000258781 SERTAD2Q14140 314 aa25.7■■□□□ 1.71
CCM2-201ENST00000258781 ERV3-1Q14264 604 aa25.7■■□□□ 1.71
CCM2-201ENST00000258781 GTF2IRD2BQ6EKJ0 949 aa25.7■■□□□ 1.71
CCM2-201ENST00000258781 GTF2IRD2Q86UP8 949 aa25.7■■□□□ 1.71
CCM2-201ENST00000258781 ZNF540Q8NDQ6 660 aa25.7■■□□□ 1.71
CCM2-201ENST00000258781 MUL1Q969V5 352 aa25.7■■□□□ 1.71
CCM2-201ENST00000258781 ISOC1Q96CN7 298 aa25.7■■□□□ 1.71
CCM2-201ENST00000258781 POLR2J3Q9H1A7 115 aaKnown RBP25.7■■□□□ 1.71
CCM2-201ENST00000258781 ERVK-18Q9QC07 812 aa25.7■■□□□ 1.71
CCM2-201ENST00000258781 HEMK1Q9Y5R4 338 aaPredicted RBP25.7■■□□□ 1.71
CCM2-201ENST00000258781 ADAMTS20P59510 1910 aa25.7■■□□□ 1.71
CCM2-201ENST00000258781 BRINP1O60477 761 aa25.7■■□□□ 1.7
CCM2-201ENST00000258781 MPZL2O60487 215 aa25.7■■□□□ 1.7
CCM2-201ENST00000258781 PNLIPP16233 465 aa25.7■■□□□ 1.7
CCM2-201ENST00000258781 SLC5A2P31639 672 aa25.7■■□□□ 1.7
CCM2-201ENST00000258781 GCGRP47871 477 aa25.7■■□□□ 1.7
CCM2-201ENST00000258781 EMDP50402 254 aa25.7■■□□□ 1.7
CCM2-201ENST00000258781 ALDH6A1Q02252 535 aaKnown RBP25.7■■□□□ 1.7
CCM2-201ENST00000258781 C1orf94Q6P1W5 598 aa25.7■■□□□ 1.7
CCM2-201ENST00000258781 CCDC90BQ9GZT6 254 aa25.7■■□□□ 1.7
CCM2-201ENST00000258781 ASCC3Q8N3C0 2202 aaKnown RBP25.69■■□□□ 1.7
CCM2-201ENST00000258781 GXYLT2A0PJZ3 443 aa25.69■■□□□ 1.7
CCM2-201ENST00000258781 RGS10O43665 173 aa25.69■■□□□ 1.7
CCM2-201ENST00000258781 OR5F1O95221 314 aa25.69■■□□□ 1.7
CCM2-201ENST00000258781 NID1P14543 1247 aa25.69■■□□□ 1.7
CCM2-201ENST00000258781 POLR2J2Q9GZM3 115 aaKnown RBP25.69■■□□□ 1.7
CCM2-201ENST00000258781 CTPS2Q9NRF8 586 aa25.69■■□□□ 1.7
CCM2-201ENST00000258781 NDOR1Q9UHB4 597 aa25.69■■□□□ 1.7
CCM2-201ENST00000258781 CPSF4LA6NMK7 179 aaKnown RBP25.68■■□□□ 1.7
CCM2-201ENST00000258781 PRAMEF2O60811 474 aa25.68■■□□□ 1.7
CCM2-201ENST00000258781 ENTPD8Q5MY95 495 aa25.68■■□□□ 1.7
CCM2-201ENST00000258781 SNAP47Q5SQN1 464 aa25.68■■□□□ 1.7
CCM2-201ENST00000258781 PLEKHM3Q6ZWE6 761 aa25.68■■□□□ 1.7
CCM2-201ENST00000258781 SUMF1Q8NBK3 374 aa25.68■■□□□ 1.7
CCM2-201ENST00000258781 TOR1AIP2Q8NFQ8 470 aa25.68■■□□□ 1.7
CCM2-201ENST00000258781 OR1L3Q8NH93 324 aa25.68■■□□□ 1.7
CCM2-201ENST00000258781 VSTM2LQ96N03 204 aa25.68■■□□□ 1.7
CCM2-201ENST00000258781 DOK1Q99704 481 aa25.68■■□□□ 1.7
CCM2-201ENST00000258781 MCHR1Q99705 422 aa25.68■■□□□ 1.7
CCM2-201ENST00000258781 LHPPQ9H008 270 aa25.68■■□□□ 1.7
CCM2-201ENST00000258781 SEMA4GQ9NTN9 838 aa25.68■■□□□ 1.7
CCM2-201ENST00000258781 CDC14AQ9UNH5 594 aa25.68■■□□□ 1.7
CCM2-201ENST00000258781 MMACHCQ9Y4U1 282 aa25.68■■□□□ 1.7
CCM2-201ENST00000258781 PCDHGA10Q9Y5H3 936 aa25.68■■□□□ 1.7
CCM2-201ENST00000258781 NUP210LQ5VU65 1888 aa25.68■■□□□ 1.7
CCM2-201ENST00000258781 CENPVL1A0A0U1RR11 272 aa25.68■■□□□ 1.7
CCM2-201ENST00000258781 MAOAP21397 527 aa25.68■■□□□ 1.7
CCM2-201ENST00000258781 MMP11P24347 488 aa25.68■■□□□ 1.7
CCM2-201ENST00000258781 TRHRP34981 398 aaPredicted RBP25.68■■□□□ 1.7
CCM2-201ENST00000258781 IFNGR2P38484 337 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms