RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 BBS1Q8NFJ9 593 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 AKAP1Q92667 903 aaKnown RBP eCLIP4.45□□□□□ -1.7
USP44-201ENST00000258499 SLC41A3Q96GZ6 507 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 OR7D2Q96RA2 312 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 ALG8Q9BVK2 526 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 LGR4Q9BXB1 951 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 LMAN2LQ9H0V9 348 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 A4GALTQ9NPC4 353 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 NDUFB11Q9NX14 153 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 RASD1Q9Y272 281 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 PLEKHM1Q9Y4G2 1056 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 A0A1B0GVT2 93 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 CENPBD1B2RD01 187 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 HOXC11O43248 304 aaPredicted RBP4.45□□□□□ -1.7
USP44-201ENST00000258499 AKR7A2O43488 359 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 HRO43593 1189 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 PIP5K1CO60331 668 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 EFCAB14O75071 495 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 CDC123O75794 336 aaPredicted RBP4.45□□□□□ -1.7
USP44-201ENST00000258499 AIFM1O95831 613 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 IFNGP01579 166 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 RLN1P04808 185 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 IFNA16P05015 189 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 DRD2P14416 443 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 ITGB7P26010 798 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 ACADLP28330 430 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 SHC1P29353 583 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 UQCRC1P31930 480 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 BMP8BP34820 402 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 KIR2DL3P43628 341 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 SOX9P48436 509 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 BLVRAP53004 296 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 PCBP3P57721 371 aaKnown RBP4.45□□□□□ -1.7
USP44-201ENST00000258499 PDGFRLQ15198 375 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 FAM27D1Q5T7N8 215 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 ANKRD54Q6NXT1 300 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 BMP8AQ7Z5Y6 402 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 C12orf40Q86WS4 652 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 TMC8Q8IU68 726 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 SLC16A11Q8NCK7 471 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 TMEM255BQ8WV15 326 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 ZFPM2Q8WW38 1151 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 CDS1Q92903 461 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 ZNF717Q9BY31 904 aaPredicted RBP4.45□□□□□ -1.7
USP44-201ENST00000258499 NLGN3Q9NZ94 848 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 IKZF2Q9UKS7 526 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 PPIL1Q9Y3C6 166 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 KCNE3Q9Y6H6 103 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 A0A0G2JMP0 313 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 A0A0G2JPF8 293 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 A0A0X1KG70 313 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 A0A1W2PRQ8 180 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 HNRNPCL3B7ZW38 293 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 FGF19O95750 216 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 NUDT14O95848 222 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 HLA-DQA2P01906 255 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 MT-ND5P03915 603 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 SEMG1P04279 462 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 HNRNPCL4P0DMR1 293 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 CHRNB1P11230 501 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 HOXB3P14651 431 aaPredicted RBP4.45□□□□□ -1.7
USP44-201ENST00000258499 POLR2CP19387 275 aaPredicted RBP4.45□□□□□ -1.7
USP44-201ENST00000258499 FUT1P19526 365 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 ZNF10P21506 573 aaPredicted RBP4.45□□□□□ -1.7
USP44-201ENST00000258499 F8A1P23610 371 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 STOMP27105 288 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 GABRA5P31644 462 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 CD79BP40259 229 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 CSNK1G2P78368 415 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 PRDX1Q06830 199 aaKnown RBP4.45□□□□□ -1.7
USP44-201ENST00000258499 RPA4Q13156 261 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 FGFBP1Q14512 234 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 C3orf38Q5JPI3 329 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 SYT9Q86SS6 491 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 OAFQ86UD1 273 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 ZNF547Q8IVP9 402 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 FAM26EQ8N5C1 309 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 MEIOBQ8N635 442 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 CLDN22Q8N7P3 220 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 OR4M2Q8NGB6 313 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 OR5H6Q8NGV6 325 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 OR5K2Q8NHB8 316 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 GOT1L1Q8NHS2 421 aaPredicted RBP4.45□□□□□ -1.7
USP44-201ENST00000258499 INSM2Q96T92 566 aaPredicted RBP4.45□□□□□ -1.7
USP44-201ENST00000258499 CACNG6Q9BXT2 260 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 GSDMCQ9BYG8 508 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 DPAGT1Q9H3H5 408 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 TMEM138Q9NPI0 162 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 SEMA4GQ9NTN9 838 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 RBFOX1Q9NWB1 397 aaKnown RBP4.45□□□□□ -1.7
USP44-201ENST00000258499 ZSCAN32Q9NX65 697 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 SAGE1Q9NXZ1 904 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 MARK1Q9P0L2 795 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 GNG8Q9UK08 70 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 A4GNTQ9UNA3 340 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 MED31Q9Y3C7 131 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 SPEF1Q9Y4P9 236 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 DOCK4Q8N1I0 1966 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 TRAV27A0A087WT01 109 aa4.44□□□□□ -1.7
USP44-201ENST00000258499 IQCMA0A1B0GVH7 501 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms