RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 B3GNT8Q7Z7M8 397 aa17.55■□□□□ 0.4
TRIM47-201ENST00000254816 LAPTM4BQ86VI4 370 aa17.55■□□□□ 0.4
TRIM47-201ENST00000254816 CLIP4Q8N3C7 705 aa17.55■□□□□ 0.4
TRIM47-201ENST00000254816 PHF10Q8WUB8 498 aaKnown RBP17.55■□□□□ 0.4
TRIM47-201ENST00000254816 CLIP3Q96DZ5 547 aa17.55■□□□□ 0.4
TRIM47-201ENST00000254816 OR1F2PQ96R84 312 aa17.55■□□□□ 0.4
TRIM47-201ENST00000254816 OCIAD1Q9NX40 245 aa17.55■□□□□ 0.4
TRIM47-201ENST00000254816 LNP1A1A4G5 178 aa17.55■□□□□ 0.4
TRIM47-201ENST00000254816 C17orf105B2RV13 164 aa17.55■□□□□ 0.4
TRIM47-201ENST00000254816 TPST2O60704 377 aa17.55■□□□□ 0.4
TRIM47-201ENST00000254816 EPHA2P29317 976 aa17.55■□□□□ 0.4
TRIM47-201ENST00000254816 LIMS1P48059 325 aa17.55■□□□□ 0.4
TRIM47-201ENST00000254816 GABARAPL2P60520 117 aa17.55■□□□□ 0.4
TRIM47-201ENST00000254816 POU6F2P78424 691 aaPredicted RBP17.55■□□□□ 0.4
TRIM47-201ENST00000254816 SERTAD2Q14140 314 aa17.55■□□□□ 0.4
TRIM47-201ENST00000254816 NPTX1Q15818 432 aa17.55■□□□□ 0.4
TRIM47-201ENST00000254816 NNATQ16517 81 aa17.55■□□□□ 0.4
TRIM47-201ENST00000254816 PWWP2BQ6NUJ5 590 aa17.55■□□□□ 0.4
TRIM47-201ENST00000254816 ZAR1Q86SH2 424 aa17.55■□□□□ 0.4
TRIM47-201ENST00000254816 ZNF321PQ8N8H1 164 aa17.55■□□□□ 0.4
TRIM47-201ENST00000254816 ALPK1Q96QP1 1244 aa17.55■□□□□ 0.4
TRIM47-201ENST00000254816 ZNF350Q9GZX5 532 aa17.55■□□□□ 0.4
TRIM47-201ENST00000254816 MTHFD2LQ9H903 347 aaPredicted RBP17.55■□□□□ 0.4
TRIM47-201ENST00000254816 NMNAT1Q9HAN9 279 aaPredicted RBP17.55■□□□□ 0.4
TRIM47-201ENST00000254816 CTSFQ9UBX1 484 aa17.55■□□□□ 0.4
TRIM47-201ENST00000254816 FTSJ1Q9UET6 329 aa17.55■□□□□ 0.4
TRIM47-201ENST00000254816 KCND3Q9UK17 655 aa17.55■□□□□ 0.4
TRIM47-201ENST00000254816 BLOC1S6Q9UL45 172 aa17.55■□□□□ 0.4
TRIM47-201ENST00000254816 A4GNTQ9UNA3 340 aa17.55■□□□□ 0.4
TRIM47-201ENST00000254816 SLC9A8Q9Y2E8 581 aa17.55■□□□□ 0.4
TRIM47-201ENST00000254816 TRBV4-1A0A0J9YWV2 114 aa17.54■□□□□ 0.4
TRIM47-201ENST00000254816 PRKNO60260 465 aaPredicted RBP17.54■□□□□ 0.4
TRIM47-201ENST00000254816 MAN1A2O60476 641 aa17.54■□□□□ 0.4
TRIM47-201ENST00000254816 NKX2-2O95096 273 aa17.54■□□□□ 0.4
TRIM47-201ENST00000254816 NR4A1P22736 598 aa17.54■□□□□ 0.4
TRIM47-201ENST00000254816 DUSP3P51452 185 aaPredicted RBP17.54■□□□□ 0.4
TRIM47-201ENST00000254816 MAPK14Q16539 360 aa17.54■□□□□ 0.4
TRIM47-201ENST00000254816 GTF2IRD2BQ6EKJ0 949 aa17.54■□□□□ 0.4
TRIM47-201ENST00000254816 LAIR1Q6GTX8 287 aa17.54■□□□□ 0.4
TRIM47-201ENST00000254816 GTF2IRD2Q86UP8 949 aa17.54■□□□□ 0.4
TRIM47-201ENST00000254816 TAGAPQ8N103 731 aa17.54■□□□□ 0.4
TRIM47-201ENST00000254816 NIPSNAP1Q9BPW8 284 aa17.54■□□□□ 0.4
TRIM47-201ENST00000254816 OR10A5Q9H207 317 aa17.54■□□□□ 0.4
TRIM47-201ENST00000254816 SLC22A11Q9NSA0 550 aa17.54■□□□□ 0.4
TRIM47-201ENST00000254816 ETAA1Q9NY74 926 aa17.54■□□□□ 0.4
TRIM47-201ENST00000254816 WARS2Q9UGM6 360 aaKnown RBP17.54■□□□□ 0.4
TRIM47-201ENST00000254816 KCNE5Q9UJ90 142 aa17.54■□□□□ 0.4
TRIM47-201ENST00000254816 ZNF443Q9Y2A4 671 aaPredicted RBP17.54■□□□□ 0.4
TRIM47-201ENST00000254816 PEX12O00623 359 aa17.54■□□□□ 0.4
TRIM47-201ENST00000254816 STX11O75558 287 aa17.54■□□□□ 0.4
TRIM47-201ENST00000254816 ZNF182P17025 639 aaPredicted RBP17.54■□□□□ 0.4
TRIM47-201ENST00000254816 RYKP34925 604 aa17.54■□□□□ 0.4
TRIM47-201ENST00000254816 HOXC5Q00444 222 aa17.54■□□□□ 0.4
TRIM47-201ENST00000254816 YOD1Q5VVQ6 348 aaPredicted RBP17.54■□□□□ 0.4
TRIM47-201ENST00000254816 RHBDD2Q6NTF9 364 aa17.54■□□□□ 0.4
TRIM47-201ENST00000254816 ZNF836Q6ZNA1 936 aa17.54■□□□□ 0.4
TRIM47-201ENST00000254816 COX15Q7KZN9 410 aa17.54■□□□□ 0.4
TRIM47-201ENST00000254816 LSRQ86X29 649 aaPredicted RBP17.54■□□□□ 0.4
TRIM47-201ENST00000254816 SLITRK4Q8IW52 837 aa17.54■□□□□ 0.4
TRIM47-201ENST00000254816 C16orf52Q8NHV5 167 aa17.54■□□□□ 0.4
TRIM47-201ENST00000254816 PTPMT1Q8WUK0 201 aaPredicted RBP17.54■□□□□ 0.4
TRIM47-201ENST00000254816 VSTM2LQ96N03 204 aa17.54■□□□□ 0.4
TRIM47-201ENST00000254816 NODALQ96S42 347 aa17.54■□□□□ 0.4
TRIM47-201ENST00000254816 CTRCQ99895 268 aa17.54■□□□□ 0.4
TRIM47-201ENST00000254816 LMF2Q9BU23 707 aaKnown RBP17.54■□□□□ 0.4
TRIM47-201ENST00000254816 RARRES3Q9UL19 164 aa17.54■□□□□ 0.4
TRIM47-201ENST00000254816 SATB2Q9UPW6 733 aa17.54■□□□□ 0.4
TRIM47-201ENST00000254816 MMACHCQ9Y4U1 282 aa17.54■□□□□ 0.4
TRIM47-201ENST00000254816 KIF26BQ2KJY2 2108 aa17.53■□□□□ 0.4
TRIM47-201ENST00000254816 D6RAR5 112 aa17.53■□□□□ 0.4
TRIM47-201ENST00000254816 SCRG1O75711 98 aa17.53■□□□□ 0.4
TRIM47-201ENST00000254816 KCNK2O95069 426 aa17.53■□□□□ 0.4
TRIM47-201ENST00000254816 ANGPTL1O95841 491 aa17.53■□□□□ 0.4
TRIM47-201ENST00000254816 CLPSP04118 112 aa17.53■□□□□ 0.4
TRIM47-201ENST00000254816 POU2F1P14859 743 aa17.53■□□□□ 0.4
TRIM47-201ENST00000254816 RPS6KA3P51812 740 aa17.53■□□□□ 0.4
TRIM47-201ENST00000254816 HMGA2P52926 109 aa17.53■□□□□ 0.4
TRIM47-201ENST00000254816 RHAGQ02094 409 aa17.53■□□□□ 0.4
TRIM47-201ENST00000254816 FUT7Q11130 342 aa17.53■□□□□ 0.4
TRIM47-201ENST00000254816 NFATC3Q12968 1075 aa17.53■□□□□ 0.4
TRIM47-201ENST00000254816 COLEC12Q5KU26 742 aa17.53■□□□□ 0.4
TRIM47-201ENST00000254816 NPSR1Q6W5P4 371 aa17.53■□□□□ 0.4
TRIM47-201ENST00000254816 QSOX2Q6ZRP7 698 aa17.53■□□□□ 0.4
TRIM47-201ENST00000254816 ZNF619Q8N2I2 560 aa17.53■□□□□ 0.4
TRIM47-201ENST00000254816 HOXB13Q92826 284 aaPredicted RBP17.53■□□□□ 0.4
TRIM47-201ENST00000254816 SIDT1Q9NXL6 827 aaKnown RBP17.53■□□□□ 0.4
TRIM47-201ENST00000254816 SLC13A4Q9UKG4 626 aa17.53■□□□□ 0.4
TRIM47-201ENST00000254816 SNX5Q9Y5X3 404 aa17.53■□□□□ 0.4
TRIM47-201ENST00000254816 IGKV3D-11A0A0A0MRZ8 115 aa17.52■□□□□ 0.4
TRIM47-201ENST00000254816 PRAMEF2O60811 474 aa17.52■□□□□ 0.4
TRIM47-201ENST00000254816 UGT2B11O75310 529 aa17.52■□□□□ 0.4
TRIM47-201ENST00000254816 INMTO95050 263 aa17.52■□□□□ 0.4
TRIM47-201ENST00000254816 CCNB2O95067 398 aa17.52■□□□□ 0.4
TRIM47-201ENST00000254816 LDOC1O95751 146 aaPredicted RBP17.52■□□□□ 0.4
TRIM47-201ENST00000254816 CCNA2P20248 432 aa17.52■□□□□ 0.4
TRIM47-201ENST00000254816 TMBIM6P55061 237 aa17.52■□□□□ 0.4
TRIM47-201ENST00000254816 TOP3AQ13472 1001 aaPredicted RBP17.52■□□□□ 0.4
TRIM47-201ENST00000254816 IL18R1Q13478 541 aa17.52■□□□□ 0.4
TRIM47-201ENST00000254816 SEC23BQ15437 767 aa17.52■□□□□ 0.4
TRIM47-201ENST00000254816 PEX5LQ8IYB4 626 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms