RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 RAB3BP20337 219 aa17.65■□□□□ 0.42
SMARCC1-201ENST00000254480 EEF1A2Q05639 463 aaKnown RBP17.65■□□□□ 0.42
SMARCC1-201ENST00000254480 ARHGAP12Q8IWW6 846 aa17.65■□□□□ 0.42
SMARCC1-201ENST00000254480 SFXN2Q96NB2 322 aa17.65■□□□□ 0.42
SMARCC1-201ENST00000254480 ADOQ96SZ5 270 aa17.65■□□□□ 0.42
SMARCC1-201ENST00000254480 TUBA1CQ9BQE3 449 aa17.65■□□□□ 0.42
SMARCC1-201ENST00000254480 ENPP4Q9Y6X5 453 aa17.65■□□□□ 0.42
SMARCC1-201ENST00000254480 TRAV18A0A075B6X5 111 aa17.65■□□□□ 0.42
SMARCC1-201ENST00000254480 TVP23AA6NH52 213 aa17.65■□□□□ 0.42
SMARCC1-201ENST00000254480 C12orf71A8MTZ7 269 aa17.65■□□□□ 0.42
SMARCC1-201ENST00000254480 NDNFQ8TB73 568 aa17.65■□□□□ 0.42
SMARCC1-201ENST00000254480 TREX2Q9BQ50 279 aaPredicted RBP17.65■□□□□ 0.42
SMARCC1-201ENST00000254480 ZNF649Q9BS31 505 aa17.65■□□□□ 0.42
SMARCC1-201ENST00000254480 EIF5A2Q9GZV4 153 aaKnown RBP17.65■□□□□ 0.42
SMARCC1-201ENST00000254480 TRAV27A0A087WT01 109 aa17.64■□□□□ 0.42
SMARCC1-201ENST00000254480 GABRR3A8MPY1 467 aa17.64■□□□□ 0.42
SMARCC1-201ENST00000254480 EPHA1P21709 976 aa17.64■□□□□ 0.42
SMARCC1-201ENST00000254480 SGSHP51688 502 aa17.64■□□□□ 0.42
SMARCC1-201ENST00000254480 MAT1AQ00266 395 aaKnown RBP17.64■□□□□ 0.42
SMARCC1-201ENST00000254480 HNRNPA1L2Q32P51 320 aaKnown RBP17.64■□□□□ 0.42
SMARCC1-201ENST00000254480 PNCKQ6P2M8 343 aa17.64■□□□□ 0.42
SMARCC1-201ENST00000254480 UGT2A3Q6UWM9 527 aa17.64■□□□□ 0.42
SMARCC1-201ENST00000254480 RFLNAQ6ZTI6 216 aa17.64■□□□□ 0.42
SMARCC1-201ENST00000254480 PDZD3Q86UT5 571 aa17.64■□□□□ 0.42
SMARCC1-201ENST00000254480 RTP3Q9BQQ7 232 aa17.64■□□□□ 0.42
SMARCC1-201ENST00000254480 DPCDQ9BVM2 203 aaPredicted RBP17.64■□□□□ 0.42
SMARCC1-201ENST00000254480 AGAP5A6NIR3 686 aa17.64■□□□□ 0.41
SMARCC1-201ENST00000254480 PRLP01236 227 aa17.64■□□□□ 0.41
SMARCC1-201ENST00000254480 AMY2AP04746 511 aa17.64■□□□□ 0.41
SMARCC1-201ENST00000254480 ERVK-25P63136 954 aa17.64■□□□□ 0.41
SMARCC1-201ENST00000254480 MICAQ29983 383 aa17.64■□□□□ 0.41
SMARCC1-201ENST00000254480 VWA5B2Q8N398 1253 aa17.64■□□□□ 0.41
SMARCC1-201ENST00000254480 FAM46BQ96A09 425 aa17.64■□□□□ 0.41
SMARCC1-201ENST00000254480 MAGIXQ9H6Y5 334 aa17.64■□□□□ 0.41
SMARCC1-201ENST00000254480 MBLAC1A4D2B0 266 aaPredicted RBP17.64■□□□□ 0.41
SMARCC1-201ENST00000254480 HMX3A6NHT5 357 aa17.64■□□□□ 0.41
SMARCC1-201ENST00000254480 ITGB7P26010 798 aa17.64■□□□□ 0.41
SMARCC1-201ENST00000254480 ART1P52961 327 aa17.64■□□□□ 0.41
SMARCC1-201ENST00000254480 SPRED3Q2MJR0 410 aa17.64■□□□□ 0.41
SMARCC1-201ENST00000254480 ATOH1Q92858 354 aaPredicted RBP17.64■□□□□ 0.41
SMARCC1-201ENST00000254480 PELI2Q9HAT8 420 aa17.64■□□□□ 0.41
SMARCC1-201ENST00000254480 ZNF175Q9Y473 711 aa17.64■□□□□ 0.41
SMARCC1-201ENST00000254480 LRP6O75581 1613 aa17.64■□□□□ 0.41
SMARCC1-201ENST00000254480 MICAL3Q7RTP6 2002 aa17.64■□□□□ 0.41
SMARCC1-201ENST00000254480 RGPD2P0DJD1 1756 aa17.64■□□□□ 0.41
SMARCC1-201ENST00000254480 SH3PXD2BA1X283 911 aa17.64■□□□□ 0.41
SMARCC1-201ENST00000254480 HLA-FP30511 346 aa17.64■□□□□ 0.41
SMARCC1-201ENST00000254480 OR1D4P47884 311 aa17.64■□□□□ 0.41
SMARCC1-201ENST00000254480 LCN8Q6JVE9 175 aa17.64■□□□□ 0.41
SMARCC1-201ENST00000254480 SLC35F2Q8IXU6 374 aa17.64■□□□□ 0.41
SMARCC1-201ENST00000254480 TOMM40LQ969M1 308 aa17.64■□□□□ 0.41
SMARCC1-201ENST00000254480 PGAP3Q96FM1 320 aaPredicted RBP17.64■□□□□ 0.41
SMARCC1-201ENST00000254480 NUDT22Q9BRQ3 303 aa17.64■□□□□ 0.41
SMARCC1-201ENST00000254480 BOLA2-SMG1P6H3BVE0 249 aa17.64■□□□□ 0.41
SMARCC1-201ENST00000254480 NUDT21O43809 227 aaKnown RBP17.64■□□□□ 0.41
SMARCC1-201ENST00000254480 EMP2P54851 167 aa17.64■□□□□ 0.41
SMARCC1-201ENST00000254480 POU4F2Q12837 409 aa17.64■□□□□ 0.41
SMARCC1-201ENST00000254480 DPY19L4Q7Z388 723 aa17.64■□□□□ 0.41
SMARCC1-201ENST00000254480 ZNF420Q8TAQ5 688 aaPredicted RBP17.64■□□□□ 0.41
SMARCC1-201ENST00000254480 HCFC2Q9Y5Z7 792 aa17.64■□□□□ 0.41
SMARCC1-201ENST00000254480 IFNGR1P15260 489 aa17.63■□□□□ 0.41
SMARCC1-201ENST00000254480 FUT1P19526 365 aa17.63■□□□□ 0.41
SMARCC1-201ENST00000254480 ZNF619Q8N2I2 560 aa17.63■□□□□ 0.41
SMARCC1-201ENST00000254480 ARL6Q9H0F7 186 aa17.63■□□□□ 0.41
SMARCC1-201ENST00000254480 CCL26Q9Y258 94 aa17.63■□□□□ 0.41
SMARCC1-201ENST00000254480 HIF3AQ9Y2N7 669 aa17.63■□□□□ 0.41
SMARCC1-201ENST00000254480 PRAMEF26H0Y7S4 382 aa17.63■□□□□ 0.41
SMARCC1-201ENST00000254480 ACOT7O00154 380 aa17.63■□□□□ 0.41
SMARCC1-201ENST00000254480 CRTAPO75718 401 aaPredicted RBP17.63■□□□□ 0.41
SMARCC1-201ENST00000254480 AK1P00568 194 aa17.63■□□□□ 0.41
SMARCC1-201ENST00000254480 OSMP13725 252 aa17.63■□□□□ 0.41
SMARCC1-201ENST00000254480 ETV5P41161 510 aa17.63■□□□□ 0.41
SMARCC1-201ENST00000254480 GPR157Q5UAW9 335 aa17.63■□□□□ 0.41
SMARCC1-201ENST00000254480 CRYGNQ8WXF5 182 aa17.63■□□□□ 0.41
SMARCC1-201ENST00000254480 PRSS38A1L453 326 aa17.63■□□□□ 0.41
SMARCC1-201ENST00000254480 F10P00742 488 aa17.63■□□□□ 0.41
SMARCC1-201ENST00000254480 PBX2P40425 430 aa17.63■□□□□ 0.41
SMARCC1-201ENST00000254480 FOLR3P41439 243 aa17.63■□□□□ 0.41
SMARCC1-201ENST00000254480 ARG2P78540 354 aa17.63■□□□□ 0.41
SMARCC1-201ENST00000254480 DTD2Q96FN9 168 aa17.63■□□□□ 0.41
SMARCC1-201ENST00000254480 OR4K3Q96R72 315 aa17.63■□□□□ 0.41
SMARCC1-201ENST00000254480 A0A0J9YY10 115 aa17.63■□□□□ 0.41
SMARCC1-201ENST00000254480 FAM183AA6NL82 134 aa17.63■□□□□ 0.41
SMARCC1-201ENST00000254480 DRD1P21728 446 aa17.63■□□□□ 0.41
SMARCC1-201ENST00000254480 AKR1C2P52895 323 aa17.63■□□□□ 0.41
SMARCC1-201ENST00000254480 TRAM1Q15629 374 aa17.63■□□□□ 0.41
SMARCC1-201ENST00000254480 VRK2Q86Y07 508 aa17.63■□□□□ 0.41
SMARCC1-201ENST00000254480 MARVELD2Q8N4S9 558 aa17.63■□□□□ 0.41
SMARCC1-201ENST00000254480 SORT1Q99523 831 aa17.63■□□□□ 0.41
SMARCC1-201ENST00000254480 ST6GALNAC5Q9BVH7 336 aa17.63■□□□□ 0.41
SMARCC1-201ENST00000254480 MYH1P12882 1939 aa17.63■□□□□ 0.41
SMARCC1-201ENST00000254480 MROH6A6NGR9 719 aa17.63■□□□□ 0.41
SMARCC1-201ENST00000254480 NOTOA8MTQ0 251 aa17.63■□□□□ 0.41
SMARCC1-201ENST00000254480 SELENOWP63302 87 aa17.63■□□□□ 0.41
SMARCC1-201ENST00000254480 CTBSQ01459 385 aa17.63■□□□□ 0.41
SMARCC1-201ENST00000254480 KIAA0895LQ68EN5 471 aa17.63■□□□□ 0.41
SMARCC1-201ENST00000254480 CCBE1Q6UXH8 406 aaPredicted RBP17.63■□□□□ 0.41
SMARCC1-201ENST00000254480 BEST3Q8N1M1 668 aa17.63■□□□□ 0.41
SMARCC1-201ENST00000254480 OR51T1Q8NGJ9 327 aa17.63■□□□□ 0.41
SMARCC1-201ENST00000254480 MSANTD3Q96H12 275 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms