RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 NATD1Q8N6N6 113 aa20.87■□□□□ 0.93
LSM4-201ENST00000252816 OR10Q1Q8NGQ4 319 aa20.87■□□□□ 0.93
LSM4-201ENST00000252816 OR14L1PQ8NHC6 308 aa20.87■□□□□ 0.93
LSM4-201ENST00000252816 ABTB1Q969K4 478 aaPredicted RBP20.87■□□□□ 0.93
LSM4-201ENST00000252816 WDYHV1Q96HA8 205 aa20.87■□□□□ 0.93
LSM4-201ENST00000252816 DUSP26Q9BV47 211 aa20.87■□□□□ 0.93
LSM4-201ENST00000252816 UCK2Q9BZX2 261 aa20.87■□□□□ 0.93
LSM4-201ENST00000252816 THAP1Q9NVV9 213 aa20.87■□□□□ 0.93
LSM4-201ENST00000252816 FAM120CQ9NX05 1096 aaKnown RBP20.87■□□□□ 0.93
LSM4-201ENST00000252816 TAS2R10Q9NYW0 307 aa20.87■□□□□ 0.93
LSM4-201ENST00000252816 Q9UFV3 132 aa20.87■□□□□ 0.93
LSM4-201ENST00000252816 PKDREJQ9NTG1 2253 aa20.87■□□□□ 0.93
LSM4-201ENST00000252816 AHRRA9YTQ3 701 aa20.86■□□□□ 0.93
LSM4-201ENST00000252816 SDHDO14521 159 aa20.86■□□□□ 0.93
LSM4-201ENST00000252816 HMGN2P05204 90 aaKnown RBP20.86■□□□□ 0.93
LSM4-201ENST00000252816 SNRPB2P08579 225 aaKnown RBP20.86■□□□□ 0.93
LSM4-201ENST00000252816 PRF1P14222 555 aa20.86■□□□□ 0.93
LSM4-201ENST00000252816 SRD5A2P31213 254 aa20.86■□□□□ 0.93
LSM4-201ENST00000252816 PTGER4P35408 488 aa20.86■□□□□ 0.93
LSM4-201ENST00000252816 PSMD4P55036 377 aaKnown RBP20.86■□□□□ 0.93
LSM4-201ENST00000252816 STX5Q13190 355 aa20.86■□□□□ 0.93
LSM4-201ENST00000252816 LASP1Q14847 261 aaKnown RBP20.86■□□□□ 0.93
LSM4-201ENST00000252816 PGS1Q32NB8 556 aa20.86■□□□□ 0.93
LSM4-201ENST00000252816 GRAMD1BQ3KR37 738 aa20.86■□□□□ 0.93
LSM4-201ENST00000252816 ACSF3Q4G176 576 aaPredicted RBP20.86■□□□□ 0.93
LSM4-201ENST00000252816 AGBL2Q5U5Z8 902 aa20.86■□□□□ 0.93
LSM4-201ENST00000252816 ZCCHC12Q6PEW1 402 aa20.86■□□□□ 0.93
LSM4-201ENST00000252816 APOOLQ6UXV4 268 aa20.86■□□□□ 0.93
LSM4-201ENST00000252816 ZAR1Q86SH2 424 aa20.86■□□□□ 0.93
LSM4-201ENST00000252816 MARCH3Q86UD3 253 aa20.86■□□□□ 0.93
LSM4-201ENST00000252816 FADS6Q8N9I5 356 aa20.86■□□□□ 0.93
LSM4-201ENST00000252816 FAM110BQ8TC76 370 aa20.86■□□□□ 0.93
LSM4-201ENST00000252816 PPP4R1LQ9P1A2 415 aa20.86■□□□□ 0.93
LSM4-201ENST00000252816 CAMK2AQ9UQM7 478 aa20.86■□□□□ 0.93
LSM4-201ENST00000252816 NUP214P35658 2090 aaPredicted RBP20.85■□□□□ 0.93
LSM4-201ENST00000252816 FAM90A27PA6NNH2 459 aa20.85■□□□□ 0.93
LSM4-201ENST00000252816 ANKRD28O15084 1053 aa20.85■□□□□ 0.93
LSM4-201ENST00000252816 ZIC3O60481 467 aa20.85■□□□□ 0.93
LSM4-201ENST00000252816 KCNK2O95069 426 aa20.85■□□□□ 0.93
LSM4-201ENST00000252816 ACTL6AO96019 429 aa20.85■□□□□ 0.93
LSM4-201ENST00000252816 ALOX5P09917 674 aa20.85■□□□□ 0.93
LSM4-201ENST00000252816 LBPP18428 481 aa20.85■□□□□ 0.93
LSM4-201ENST00000252816 CCT3P49368 545 aaKnown RBP20.85■□□□□ 0.93
LSM4-201ENST00000252816 WNT3P56703 355 aa20.85■□□□□ 0.93
LSM4-201ENST00000252816 HBA1P69905 142 aa20.85■□□□□ 0.93
LSM4-201ENST00000252816 LSM12Q3MHD2 195 aaKnown RBP20.85■□□□□ 0.93
LSM4-201ENST00000252816 FIGNL1Q6PIW4 674 aa20.85■□□□□ 0.93
LSM4-201ENST00000252816 TRIM42Q8IWZ5 723 aa20.85■□□□□ 0.93
LSM4-201ENST00000252816 OR2M3Q8NG83 312 aa20.85■□□□□ 0.93
LSM4-201ENST00000252816 OR4K17Q8NGC6 315 aa20.85■□□□□ 0.93
LSM4-201ENST00000252816 JADE3Q92613 823 aa20.85■□□□□ 0.93
LSM4-201ENST00000252816 DSN1Q9H410 356 aa20.85■□□□□ 0.93
LSM4-201ENST00000252816 FBXO34Q9NWN3 711 aa20.85■□□□□ 0.93
LSM4-201ENST00000252816 MARCOQ9UEW3 520 aaPredicted RBP20.85■□□□□ 0.93
LSM4-201ENST00000252816 NKX2-6A6NCS4 301 aa20.84■□□□□ 0.93
LSM4-201ENST00000252816 TOXO94900 526 aa20.84■□□□□ 0.93
LSM4-201ENST00000252816 TCEA1P23193 301 aaKnown RBP20.84■□□□□ 0.93
LSM4-201ENST00000252816 DPP4P27487 766 aa20.84■□□□□ 0.93
LSM4-201ENST00000252816 PRIM2P49643 509 aa20.84■□□□□ 0.93
LSM4-201ENST00000252816 GFRA1P56159 465 aa20.84■□□□□ 0.93
LSM4-201ENST00000252816 OCRLQ01968 901 aa20.84■□□□□ 0.93
LSM4-201ENST00000252816 OR4F3Q6IEY1 312 aa20.84■□□□□ 0.93
LSM4-201ENST00000252816 IFNEQ86WN2 208 aa20.84■□□□□ 0.93
LSM4-201ENST00000252816 LIX1LQ8IVB5 337 aa20.84■□□□□ 0.93
LSM4-201ENST00000252816 PM20D2Q8IYS1 436 aa20.84■□□□□ 0.93
LSM4-201ENST00000252816 LRRC34Q8IZ02 419 aa20.84■□□□□ 0.93
LSM4-201ENST00000252816 CLECL1Q8IZS7 167 aa20.84■□□□□ 0.93
LSM4-201ENST00000252816 RAB3IL1Q8TBN0 382 aa20.84■□□□□ 0.93
LSM4-201ENST00000252816 DUSP19Q8WTR2 217 aa20.84■□□□□ 0.93
LSM4-201ENST00000252816 DPY30Q9C005 99 aa20.84■□□□□ 0.93
LSM4-201ENST00000252816 MANSC1Q9H8J5 431 aa20.84■□□□□ 0.93
LSM4-201ENST00000252816 GPATCH2Q9NW75 528 aa20.84■□□□□ 0.93
LSM4-201ENST00000252816 MED11Q9P086 117 aa20.84■□□□□ 0.93
LSM4-201ENST00000252816 DKKL1Q9UK85 242 aa20.84■□□□□ 0.93
LSM4-201ENST00000252816 MRPS18CQ9Y3D5 142 aaKnown RBP20.84■□□□□ 0.93
LSM4-201ENST00000252816 FBN2P35556 2912 aa20.83■□□□□ 0.93
LSM4-201ENST00000252816 DCHS2Q6V1P9 2916 aa20.83■□□□□ 0.93
LSM4-201ENST00000252816 HDAC3O15379 428 aa20.83■□□□□ 0.93
LSM4-201ENST00000252816 CFLARO15519 480 aa20.83■□□□□ 0.93
LSM4-201ENST00000252816 EPPINO95925 133 aa20.83■□□□□ 0.93
LSM4-201ENST00000252816 ALDOCP09972 364 aaKnown RBP20.83■□□□□ 0.93
LSM4-201ENST00000252816 KITP10721 976 aa20.83■□□□□ 0.93
LSM4-201ENST00000252816 ZFP36L2P47974 494 aaKnown RBP20.83■□□□□ 0.93
LSM4-201ENST00000252816 PHC1P78364 1004 aa20.83■□□□□ 0.93
LSM4-201ENST00000252816 TFF3Q07654 80 aa20.83■□□□□ 0.93
LSM4-201ENST00000252816 TP53BP2Q13625 1128 aa20.83■□□□□ 0.93
LSM4-201ENST00000252816 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.83■□□□□ 0.93
LSM4-201ENST00000252816 SPDYE7PQ495Y7 208 aa20.83■□□□□ 0.93
LSM4-201ENST00000252816 CCNJQ5T5M9 372 aa20.83■□□□□ 0.93
LSM4-201ENST00000252816 RIPPLY2Q5TAB7 128 aa20.83■□□□□ 0.93
LSM4-201ENST00000252816 ATG16L1Q676U5 607 aa20.83■□□□□ 0.93
LSM4-201ENST00000252816 OGFOD2Q6N063 350 aa20.83■□□□□ 0.93
LSM4-201ENST00000252816 WDR75Q8IWA0 830 aaKnown RBP20.83■□□□□ 0.93
LSM4-201ENST00000252816 COX18Q8N8Q8 333 aa20.83■□□□□ 0.93
LSM4-201ENST00000252816 ACBD4Q8NC06 268 aa20.83■□□□□ 0.93
LSM4-201ENST00000252816 OR8J2Q8NGG1 315 aa20.83■□□□□ 0.93
LSM4-201ENST00000252816 OR56A1Q8NGH5 318 aa20.83■□□□□ 0.93
LSM4-201ENST00000252816 OR4C3Q8NH37 302 aa20.83■□□□□ 0.93
LSM4-201ENST00000252816 SFXN5Q8TD22 340 aa20.83■□□□□ 0.93
LSM4-201ENST00000252816 CDS1Q92903 461 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms