RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 BARD1Q99728 777 aaKnown RBP13.16□□□□□ -0.3
SDF2-201ENST00000247020 YTHDF1Q9BYJ9 559 aaKnown RBP13.16□□□□□ -0.3
SDF2-201ENST00000247020 QRSL1Q9H0R6 528 aaKnown RBP13.16□□□□□ -0.3
SDF2-201ENST00000247020 WDR54Q9H977 334 aa13.16□□□□□ -0.3
SDF2-201ENST00000247020 COPS7AQ9UBW8 275 aa13.16□□□□□ -0.3
SDF2-201ENST00000247020 CTSFQ9UBX1 484 aa13.16□□□□□ -0.3
SDF2-201ENST00000247020 CBLCQ9ULV8 474 aa13.16□□□□□ -0.3
SDF2-201ENST00000247020 GPR55Q9Y2T6 319 aaPredicted RBP13.16□□□□□ -0.3
SDF2-201ENST00000247020 CHST2Q9Y4C5 530 aa13.16□□□□□ -0.3
SDF2-201ENST00000247020 HSPE1-MOB4S4R3N1 261 aa13.16□□□□□ -0.3
SDF2-201ENST00000247020 LOC100130705A0A1B0GUX0 176 aa13.15□□□□□ -0.3
SDF2-201ENST00000247020 FRG2CA6NGY1 282 aa13.15□□□□□ -0.3
SDF2-201ENST00000247020 AP3D1O14617 1153 aa13.15□□□□□ -0.3
SDF2-201ENST00000247020 FMO6PO60774 539 aa13.15□□□□□ -0.3
SDF2-201ENST00000247020 CBFA2T3O75081 653 aa13.15□□□□□ -0.3
SDF2-201ENST00000247020 SEMA7AO75326 666 aa13.15□□□□□ -0.3
SDF2-201ENST00000247020 ELAVL4P26378 380 aaKnown RBP13.15□□□□□ -0.3
SDF2-201ENST00000247020 RGS8P57771 180 aaPredicted RBP13.15□□□□□ -0.3
SDF2-201ENST00000247020 RAB15P59190 212 aa13.15□□□□□ -0.3
SDF2-201ENST00000247020 ZNF141Q15928 474 aa13.15□□□□□ -0.3
SDF2-201ENST00000247020 FLYWCH1Q4VC44 716 aa13.15□□□□□ -0.3
SDF2-201ENST00000247020 NPSR1Q6W5P4 371 aa13.15□□□□□ -0.3
SDF2-201ENST00000247020 COMTD1Q86VU5 262 aa13.15□□□□□ -0.3
SDF2-201ENST00000247020 CMIPQ8IY22 773 aa13.15□□□□□ -0.3
SDF2-201ENST00000247020 C17orf47Q8NEP4 570 aa13.15□□□□□ -0.3
SDF2-201ENST00000247020 OR1N1Q8NGS0 311 aa13.15□□□□□ -0.3
SDF2-201ENST00000247020 CMKLR1Q99788 373 aa13.15□□□□□ -0.3
SDF2-201ENST00000247020 FUZQ9BT04 418 aa13.15□□□□□ -0.3
SDF2-201ENST00000247020 FNDC11Q9BVV2 318 aa13.15□□□□□ -0.3
SDF2-201ENST00000247020 ITPAQ9BY32 194 aa13.15□□□□□ -0.3
SDF2-201ENST00000247020 GABARAPL3Q9BY60 117 aa13.15□□□□□ -0.3
SDF2-201ENST00000247020 STRADBQ9C0K7 418 aa13.15□□□□□ -0.3
SDF2-201ENST00000247020 ZNF556Q9HAH1 456 aa13.15□□□□□ -0.3
SDF2-201ENST00000247020 APMAPQ9HDC9 416 aa13.15□□□□□ -0.3
SDF2-201ENST00000247020 MRTO4Q9UKD2 239 aaKnown RBP13.15□□□□□ -0.3
SDF2-201ENST00000247020 DTX4Q9Y2E6 619 aa13.15□□□□□ -0.3
SDF2-201ENST00000247020 MEN1O00255 615 aa13.15□□□□□ -0.3
SDF2-201ENST00000247020 RFPL3O75679 317 aa13.15□□□□□ -0.3
SDF2-201ENST00000247020 ADAP00813 363 aa13.15□□□□□ -0.3
SDF2-201ENST00000247020 HEXBP07686 556 aa13.15□□□□□ -0.3
SDF2-201ENST00000247020 DRD5P21918 477 aa13.15□□□□□ -0.3
SDF2-201ENST00000247020 CBLP22681 906 aa13.15□□□□□ -0.3
SDF2-201ENST00000247020 EFNA3P52797 238 aa13.15□□□□□ -0.3
SDF2-201ENST00000247020 MYBPC1Q00872 1141 aa13.15□□□□□ -0.3
SDF2-201ENST00000247020 ST3GAL3Q11203 375 aa13.15□□□□□ -0.3
SDF2-201ENST00000247020 SF3A2Q15428 464 aaKnown RBP13.15□□□□□ -0.3
SDF2-201ENST00000247020 NPTX1Q15818 432 aa13.15□□□□□ -0.3
SDF2-201ENST00000247020 CSRP2Q16527 193 aa13.15□□□□□ -0.3
SDF2-201ENST00000247020 DECR1Q16698 335 aa13.15□□□□□ -0.3
SDF2-201ENST00000247020 ZIK1Q3SY52 487 aaPredicted RBP13.15□□□□□ -0.3
SDF2-201ENST00000247020 MRPL14Q6P1L8 145 aaKnown RBP13.15□□□□□ -0.3
SDF2-201ENST00000247020 FIGNL1Q6PIW4 674 aa13.15□□□□□ -0.3
SDF2-201ENST00000247020 RANBP3LQ86VV4 465 aaPredicted RBP13.15□□□□□ -0.3
SDF2-201ENST00000247020 RBM45Q8IUH3 476 aaKnown RBP13.15□□□□□ -0.3
SDF2-201ENST00000247020 C8orf59Q8N0T1 100 aaPredicted RBP13.15□□□□□ -0.3
SDF2-201ENST00000247020 PARP8Q8N3A8 854 aa13.15□□□□□ -0.3
SDF2-201ENST00000247020 SETD9Q8NE22 299 aa13.15□□□□□ -0.3
SDF2-201ENST00000247020 OR52J3Q8NH60 311 aa13.15□□□□□ -0.3
SDF2-201ENST00000247020 ATOH1Q92858 354 aaPredicted RBP13.15□□□□□ -0.3
SDF2-201ENST00000247020 FEVQ99581 238 aa13.15□□□□□ -0.3
SDF2-201ENST00000247020 ZPBPQ9BS86 351 aa13.15□□□□□ -0.3
SDF2-201ENST00000247020 GRIP2Q9C0E4 1043 aa13.15□□□□□ -0.3
SDF2-201ENST00000247020 HOXD1Q9GZZ0 328 aa13.15□□□□□ -0.3
SDF2-201ENST00000247020 PPIEQ9UNP9 301 aaKnown RBP13.15□□□□□ -0.3
SDF2-201ENST00000247020 MGAT4BQ9UQ53 548 aa13.15□□□□□ -0.3
SDF2-201ENST00000247020 OR10H1Q9Y4A9 318 aa13.15□□□□□ -0.3
SDF2-201ENST00000247020 PCDHGA1Q9Y5H4 931 aa13.15□□□□□ -0.3
SDF2-201ENST00000247020 CDHR4A6H8M9 788 aa13.14□□□□□ -0.31
SDF2-201ENST00000247020 IDSB3KWA1 339 aa13.14□□□□□ -0.31
SDF2-201ENST00000247020 E9PQ18 207 aa13.14□□□□□ -0.31
SDF2-201ENST00000247020 NPIPB9F8W1W9 429 aa13.14□□□□□ -0.31
SDF2-201ENST00000247020 PCDH17O14917 1159 aa13.14□□□□□ -0.31
SDF2-201ENST00000247020 FOXD2O60548 495 aaPredicted RBP13.14□□□□□ -0.31
SDF2-201ENST00000247020 ALOX12BO75342 701 aa13.14□□□□□ -0.31
SDF2-201ENST00000247020 OR5F1O95221 314 aa13.14□□□□□ -0.31
SDF2-201ENST00000247020 KLK3P07288 261 aaPredicted RBP13.14□□□□□ -0.31
SDF2-201ENST00000247020 CD63P08962 238 aa13.14□□□□□ -0.31
SDF2-201ENST00000247020 GNAO1P09471 354 aa13.14□□□□□ -0.31
SDF2-201ENST00000247020 CCNYL3P0C7X3 344 aa13.14□□□□□ -0.31
SDF2-201ENST00000247020 RYKP34925 604 aa13.14□□□□□ -0.31
SDF2-201ENST00000247020 ATP12AP54707 1039 aa13.14□□□□□ -0.31
SDF2-201ENST00000247020 NPRL3Q12980 569 aa13.14□□□□□ -0.31
SDF2-201ENST00000247020 LAPTM4AQ15012 233 aa13.14□□□□□ -0.31
SDF2-201ENST00000247020 MAPK14Q16539 360 aa13.14□□□□□ -0.31
SDF2-201ENST00000247020 ZNF770Q6IQ21 691 aaPredicted RBP13.14□□□□□ -0.31
SDF2-201ENST00000247020 TMEM154Q6P9G4 183 aa13.14□□□□□ -0.31
SDF2-201ENST00000247020 THAP5Q7Z6K1 395 aa13.14□□□□□ -0.31
SDF2-201ENST00000247020 LAPTM4BQ86VI4 370 aa13.14□□□□□ -0.31
SDF2-201ENST00000247020 CLIP4Q8N3C7 705 aa13.14□□□□□ -0.31
SDF2-201ENST00000247020 SLC5A8Q8N695 610 aa13.14□□□□□ -0.31
SDF2-201ENST00000247020 BCORP1Q8N888 145 aa13.14□□□□□ -0.31
SDF2-201ENST00000247020 METTL21AQ8WXB1 218 aa13.14□□□□□ -0.31
SDF2-201ENST00000247020 DIO2Q92813 273 aa13.14□□□□□ -0.31
SDF2-201ENST00000247020 LCORQ96JN0 433 aaPredicted RBP13.14□□□□□ -0.31
SDF2-201ENST00000247020 PITX2Q99697 317 aa13.14□□□□□ -0.31
SDF2-201ENST00000247020 WFDC6Q9BQY6 131 aa13.14□□□□□ -0.31
SDF2-201ENST00000247020 OR8D2Q9GZM6 311 aa13.14□□□□□ -0.31
SDF2-201ENST00000247020 PAPOLBQ9NRJ5 636 aaKnown RBP13.14□□□□□ -0.31
SDF2-201ENST00000247020 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.14□□□□□ -0.31
SDF2-201ENST00000247020 SEMA4GQ9NTN9 838 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms