RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 ABHD13Q7L211 337 aa20.46■□□□□ 0.87
RNF39-201ENST00000244360 RAB43Q86YS6 212 aa20.46■□□□□ 0.87
RNF39-201ENST00000244360 ISYNA1Q9NPH2 558 aa20.46■□□□□ 0.87
RNF39-201ENST00000244360 MRPS18AQ9NVS2 196 aaKnown RBP20.46■□□□□ 0.87
RNF39-201ENST00000244360 HS3ST3A1Q9Y663 406 aa20.46■□□□□ 0.87
RNF39-201ENST00000244360 DNAJB6O75190 326 aa20.46■□□□□ 0.87
RNF39-201ENST00000244360 ZNF10P21506 573 aaPredicted RBP20.46■□□□□ 0.87
RNF39-201ENST00000244360 TRHRP34981 398 aaPredicted RBP20.46■□□□□ 0.87
RNF39-201ENST00000244360 SIM1P81133 766 aaPredicted RBP20.46■□□□□ 0.87
RNF39-201ENST00000244360 BNC1Q01954 994 aa20.46■□□□□ 0.87
RNF39-201ENST00000244360 C3orf38Q5JPI3 329 aa20.46■□□□□ 0.87
RNF39-201ENST00000244360 TMEM31Q5JXX7 168 aa20.46■□□□□ 0.87
RNF39-201ENST00000244360 EXOSC6Q5RKV6 272 aaKnown RBP20.46■□□□□ 0.87
RNF39-201ENST00000244360 ZNF517Q6ZMY9 492 aaPredicted RBP20.46■□□□□ 0.87
RNF39-201ENST00000244360 RASSF6Q6ZTQ3 369 aa20.46■□□□□ 0.87
RNF39-201ENST00000244360 OR52I1Q8NGK6 324 aa20.46■□□□□ 0.87
RNF39-201ENST00000244360 RPLP0P6Q8NHW5 317 aa20.46■□□□□ 0.87
RNF39-201ENST00000244360 CDS1Q92903 461 aa20.46■□□□□ 0.87
RNF39-201ENST00000244360 LRR1Q96L50 414 aa20.46■□□□□ 0.87
RNF39-201ENST00000244360 ZFYVE21Q9BQ24 234 aa20.46■□□□□ 0.87
RNF39-201ENST00000244360 MTHFD2LQ9H903 347 aaPredicted RBP20.46■□□□□ 0.87
RNF39-201ENST00000244360 ZNF443Q9Y2A4 671 aaPredicted RBP20.46■□□□□ 0.87
RNF39-201ENST00000244360 RBMX2Q9Y388 322 aaKnown RBP20.46■□□□□ 0.87
RNF39-201ENST00000244360 ENTPD2Q9Y5L3 495 aa20.46■□□□□ 0.87
RNF39-201ENST00000244360 LOC105369274A0A096LPK9 316 aa20.45■□□□□ 0.86
RNF39-201ENST00000244360 LOC102723532A0A0G2JNH3 316 aa20.45■□□□□ 0.86
RNF39-201ENST00000244360 FAM221BA6H8Z2 402 aa20.45■□□□□ 0.86
RNF39-201ENST00000244360 CPSF4LA6NMK7 179 aaKnown RBP20.45■□□□□ 0.86
RNF39-201ENST00000244360 STK25O00506 426 aa20.45■□□□□ 0.86
RNF39-201ENST00000244360 UBXN7O94888 489 aa20.45■□□□□ 0.86
RNF39-201ENST00000244360 TRAPPC2P0DI81 140 aa20.45■□□□□ 0.86
RNF39-201ENST00000244360 TRAPPC2BP0DI82 140 aa20.45■□□□□ 0.86
RNF39-201ENST00000244360 CPMP14384 443 aa20.45■□□□□ 0.86
RNF39-201ENST00000244360 MYL12AP19105 171 aa20.45■□□□□ 0.86
RNF39-201ENST00000244360 OMPP47874 163 aa20.45■□□□□ 0.86
RNF39-201ENST00000244360 GAS1P54826 345 aa20.45■□□□□ 0.86
RNF39-201ENST00000244360 ILF3Q12906 894 aaKnown RBP eCLIP20.45■□□□□ 0.86
RNF39-201ENST00000244360 ARHGAP11BQ3KRB8 267 aa20.45■□□□□ 0.86
RNF39-201ENST00000244360 FHL5Q5TD97 284 aa20.45■□□□□ 0.86
RNF39-201ENST00000244360 PRICKLE2Q7Z3G6 844 aa20.45■□□□□ 0.86
RNF39-201ENST00000244360 NRARPQ7Z6K4 114 aa20.45■□□□□ 0.86
RNF39-201ENST00000244360 LAX1Q8IWV1 398 aa20.45■□□□□ 0.86
RNF39-201ENST00000244360 TRIM48Q8IWZ4 208 aa20.45■□□□□ 0.86
RNF39-201ENST00000244360 OR4N4Q8N0Y3 316 aa20.45■□□□□ 0.86
RNF39-201ENST00000244360 OR8D4Q8NGM9 314 aa20.45■□□□□ 0.86
RNF39-201ENST00000244360 OR6F1Q8NGZ6 308 aa20.45■□□□□ 0.86
RNF39-201ENST00000244360 OR10G6Q8NH81 332 aa20.45■□□□□ 0.86
RNF39-201ENST00000244360 TMEM163Q8TC26 289 aa20.45■□□□□ 0.86
RNF39-201ENST00000244360 MSLNLQ96KJ4 702 aa20.45■□□□□ 0.86
RNF39-201ENST00000244360 MED18Q9BUE0 208 aa20.45■□□□□ 0.86
RNF39-201ENST00000244360 EGLN3Q9H6Z9 239 aa20.45■□□□□ 0.86
RNF39-201ENST00000244360 TMEM74BQ9NUR3 256 aa20.45■□□□□ 0.86
RNF39-201ENST00000244360 CCNYL3P0C7X3 344 aa20.45■□□□□ 0.86
RNF39-201ENST00000244360 GABRG2P18507 467 aa20.45■□□□□ 0.86
RNF39-201ENST00000244360 NR4A2P43354 598 aa20.45■□□□□ 0.86
RNF39-201ENST00000244360 SCN1BQ07699 218 aa20.45■□□□□ 0.86
RNF39-201ENST00000244360 DECR1Q16698 335 aa20.45■□□□□ 0.86
RNF39-201ENST00000244360 PUS10Q3MIT2 529 aaKnown RBP20.45■□□□□ 0.86
RNF39-201ENST00000244360 ZNF628Q5EBL2 1059 aa20.45■□□□□ 0.86
RNF39-201ENST00000244360 LIPKQ5VXJ0 399 aa20.45■□□□□ 0.86
RNF39-201ENST00000244360 TYW3Q6IPR3 259 aaKnown RBP20.45■□□□□ 0.86
RNF39-201ENST00000244360 SLC27A4Q6P1M0 643 aa20.45■□□□□ 0.86
RNF39-201ENST00000244360 Q6ZSR6 202 aa20.45■□□□□ 0.86
RNF39-201ENST00000244360 CACTIN-AS1Q8N1I8 211 aa20.45■□□□□ 0.86
RNF39-201ENST00000244360 TEX47Q8TBZ9 253 aa20.45■□□□□ 0.86
RNF39-201ENST00000244360 GPBAR1Q8TDU6 330 aa20.45■□□□□ 0.86
RNF39-201ENST00000244360 CAPSLQ8WWF8 208 aa20.45■□□□□ 0.86
RNF39-201ENST00000244360 COL26A1Q96A83 441 aa20.45■□□□□ 0.86
RNF39-201ENST00000244360 TRMT61AQ96FX7 289 aaKnown RBP20.45■□□□□ 0.86
RNF39-201ENST00000244360 NELL2Q99435 816 aa20.45■□□□□ 0.86
RNF39-201ENST00000244360 POT1Q9NUX5 634 aa20.45■□□□□ 0.86
RNF39-201ENST00000244360 EVA1BQ9NVM1 165 aa20.45■□□□□ 0.86
RNF39-201ENST00000244360 TXNL4BQ9NX01 149 aaKnown RBP20.45■□□□□ 0.86
RNF39-201ENST00000244360 XIRP2A4UGR9 3374 aa20.44■□□□□ 0.86
RNF39-201ENST00000244360 TCRBV21S2A2A0A5A6 115 aa20.44■□□□□ 0.86
RNF39-201ENST00000244360 SSX4O60224 188 aa20.44■□□□□ 0.86
RNF39-201ENST00000244360 OR5F1O95221 314 aa20.44■□□□□ 0.86
RNF39-201ENST00000244360 IL7P13232 177 aa20.44■□□□□ 0.86
RNF39-201ENST00000244360 IFNA8P32881 189 aa20.44■□□□□ 0.86
RNF39-201ENST00000244360 LTBRP36941 435 aa20.44■□□□□ 0.86
RNF39-201ENST00000244360 RPS5P46782 204 aaKnown RBP20.44■□□□□ 0.86
RNF39-201ENST00000244360 RGS8P57771 180 aaPredicted RBP20.44■□□□□ 0.86
RNF39-201ENST00000244360 UBE2IP63279 158 aaKnown RBP20.44■□□□□ 0.86
RNF39-201ENST00000244360 SF3B4Q15427 424 aaKnown RBP eCLIP20.44■□□□□ 0.86
RNF39-201ENST00000244360 ZNF79Q15937 498 aa20.44■□□□□ 0.86
RNF39-201ENST00000244360 HSDL2Q6YN16 418 aa20.44■□□□□ 0.86
RNF39-201ENST00000244360 ZNF730Q6ZMV8 503 aa20.44■□□□□ 0.86
RNF39-201ENST00000244360 ABI3BPQ7Z7G0 1075 aa20.44■□□□□ 0.86
RNF39-201ENST00000244360 BAHD1Q8TBE0 780 aaPredicted RBP20.44■□□□□ 0.86
RNF39-201ENST00000244360 PIGXQ8TBF5 258 aa20.44■□□□□ 0.86
RNF39-201ENST00000244360 ACOT11Q8WXI4 607 aaPredicted RBP20.44■□□□□ 0.86
RNF39-201ENST00000244360 SAP130Q9H0E3 1048 aa20.44■□□□□ 0.86
RNF39-201ENST00000244360 C19orf53Q9UNZ5 99 aaPredicted RBP20.44■□□□□ 0.86
RNF39-201ENST00000244360 MRPS2Q9Y399 296 aaKnown RBP20.44■□□□□ 0.86
RNF39-201ENST00000244360 FANCMQ8IYD8 2048 aa20.44■□□□□ 0.86
RNF39-201ENST00000244360 SCN3AQ9NY46 2000 aa20.44■□□□□ 0.86
RNF39-201ENST00000244360 A8MU76 341 aa20.43■□□□□ 0.86
RNF39-201ENST00000244360 H0YGG7 62 aa20.43■□□□□ 0.86
RNF39-201ENST00000244360 ACP2P11117 423 aa20.43■□□□□ 0.86
RNF39-201ENST00000244360 FPR3P25089 353 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms