RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 C20orf24Q9BUV8 137 aa10.55□□□□□ -0.72
MSH6-201ENST00000234420 OR51E2Q9H255 320 aa10.55□□□□□ -0.72
MSH6-201ENST00000234420 ZNF696Q9H7X3 374 aa10.55□□□□□ -0.72
MSH6-201ENST00000234420 CNTN3Q9P232 1028 aa10.55□□□□□ -0.72
MSH6-201ENST00000234420 CIDEAO60543 219 aa10.54□□□□□ -0.72
MSH6-201ENST00000234420 HOXD8P13378 290 aaPredicted RBP10.54□□□□□ -0.72
MSH6-201ENST00000234420 STK19P49842 368 aaPredicted RBP10.54□□□□□ -0.72
MSH6-201ENST00000234420 HHEXQ03014 270 aa10.54□□□□□ -0.72
MSH6-201ENST00000234420 PHYHD1Q5SRE7 291 aa10.54□□□□□ -0.72
MSH6-201ENST00000234420 VASNQ6EMK4 673 aa10.54□□□□□ -0.72
MSH6-201ENST00000234420 KIAA0930Q6ICG6 404 aaPredicted RBP10.54□□□□□ -0.72
MSH6-201ENST00000234420 ADAM5Q6NVV9 412 aa10.54□□□□□ -0.72
MSH6-201ENST00000234420 LINC00471Q8N535 108 aa10.54□□□□□ -0.72
MSH6-201ENST00000234420 ZNF317Q96PQ6 595 aaPredicted RBP10.54□□□□□ -0.72
MSH6-201ENST00000234420 CCM2Q9BSQ5 444 aa10.54□□□□□ -0.72
MSH6-201ENST00000234420 ZNF286AQ9HBT8 521 aa10.54□□□□□ -0.72
MSH6-201ENST00000234420 TAS2R8Q9NYW2 309 aa10.54□□□□□ -0.72
MSH6-201ENST00000234420 PFKLP17858 780 aa10.54□□□□□ -0.72
MSH6-201ENST00000234420 DDCP20711 480 aa10.54□□□□□ -0.72
MSH6-201ENST00000234420 AK4P27144 223 aaPredicted RBP10.54□□□□□ -0.72
MSH6-201ENST00000234420 ASPAP45381 313 aa10.54□□□□□ -0.72
MSH6-201ENST00000234420 FAM199XQ6PEV8 388 aaPredicted RBP10.54□□□□□ -0.72
MSH6-201ENST00000234420 BPHLQ86WA6 291 aaPredicted RBP10.54□□□□□ -0.72
MSH6-201ENST00000234420 MAP4K3Q8IVH8 894 aa10.54□□□□□ -0.72
MSH6-201ENST00000234420 OR4N5Q8IXE1 308 aa10.54□□□□□ -0.72
MSH6-201ENST00000234420 OR56A1Q8NGH5 318 aa10.54□□□□□ -0.72
MSH6-201ENST00000234420 GNPDA2Q8TDQ7 276 aa10.54□□□□□ -0.72
MSH6-201ENST00000234420 URM1Q9BTM9 101 aaKnown RBP10.54□□□□□ -0.72
MSH6-201ENST00000234420 TSPAN10Q9H1Z9 355 aaPredicted RBP10.54□□□□□ -0.72
MSH6-201ENST00000234420 NLGN3Q9NZ94 848 aa10.54□□□□□ -0.72
MSH6-201ENST00000234420 VDAC3Q9Y277 283 aa10.54□□□□□ -0.72
MSH6-201ENST00000234420 OTOFQ9HC10 1997 aa10.54□□□□□ -0.72
MSH6-201ENST00000234420 DUXAA6NLW8 204 aa10.54□□□□□ -0.72
MSH6-201ENST00000234420 H3BMQ9 156 aa10.54□□□□□ -0.72
MSH6-201ENST00000234420 CST3P01034 146 aaPredicted RBP10.54□□□□□ -0.72
MSH6-201ENST00000234420 GAAP10253 952 aa10.54□□□□□ -0.72
MSH6-201ENST00000234420 ATP1B2P14415 290 aaPredicted RBP10.54□□□□□ -0.72
MSH6-201ENST00000234420 HTR7P34969 479 aa10.54□□□□□ -0.72
MSH6-201ENST00000234420 NUDT1P36639 197 aa10.54□□□□□ -0.72
MSH6-201ENST00000234420 CDKN2BP42772 138 aa10.54□□□□□ -0.72
MSH6-201ENST00000234420 PTGIRP43119 386 aa10.54□□□□□ -0.72
MSH6-201ENST00000234420 ZNF695Q8IW36 515 aa10.54□□□□□ -0.72
MSH6-201ENST00000234420 PLPP5Q8NEB5 264 aa10.54□□□□□ -0.72
MSH6-201ENST00000234420 SLC30A7Q8NEW0 376 aa10.54□□□□□ -0.72
MSH6-201ENST00000234420 OR1E3Q8WZA6 343 aa10.54□□□□□ -0.72
MSH6-201ENST00000234420 FAM122AQ96E09 287 aa10.54□□□□□ -0.72
MSH6-201ENST00000234420 ELF4Q99607 663 aaPredicted RBP10.54□□□□□ -0.72
MSH6-201ENST00000234420 ASTN1O14525 1302 aa10.54□□□□□ -0.72
MSH6-201ENST00000234420 ARHGEF17Q96PE2 2063 aaPredicted RBP10.54□□□□□ -0.72
MSH6-201ENST00000234420 LGALS8O00214 317 aa10.54□□□□□ -0.72
MSH6-201ENST00000234420 KCNQ1P51787 676 aa10.54□□□□□ -0.72
MSH6-201ENST00000234420 ERV3-1Q14264 604 aa10.54□□□□□ -0.72
MSH6-201ENST00000234420 ADIPOR1Q96A54 375 aa10.54□□□□□ -0.72
MSH6-201ENST00000234420 ARHGAP39Q9C0H5 1083 aa10.54□□□□□ -0.72
MSH6-201ENST00000234420 GPR88Q9GZN0 384 aa10.54□□□□□ -0.72
MSH6-201ENST00000234420 PDZD7Q9H5P4 517 aa10.54□□□□□ -0.72
MSH6-201ENST00000234420 GPR83Q9NYM4 423 aa10.54□□□□□ -0.72
MSH6-201ENST00000234420 PEAK1Q9H792 1746 aa10.54□□□□□ -0.72
MSH6-201ENST00000234420 UPK3BL1B0FP48 263 aa10.54□□□□□ -0.72
MSH6-201ENST00000234420 UPK3BL2E5RIL1 263 aa10.54□□□□□ -0.72
MSH6-201ENST00000234420 SCAF4O95104 1147 aaKnown RBP10.54□□□□□ -0.72
MSH6-201ENST00000234420 PITPNBP48739 271 aa10.54□□□□□ -0.72
MSH6-201ENST00000234420 RPS13P62277 151 aaKnown RBP10.54□□□□□ -0.72
MSH6-201ENST00000234420 RPS27AP62979 156 aaKnown RBP10.54□□□□□ -0.72
MSH6-201ENST00000234420 UBA52P62987 128 aaKnown RBP10.54□□□□□ -0.72
MSH6-201ENST00000234420 MEX3BQ6ZN04 569 aaKnown RBP10.54□□□□□ -0.72
MSH6-201ENST00000234420 TECPR1Q7Z6L1 1165 aa10.54□□□□□ -0.72
MSH6-201ENST00000234420 TOMM40LQ969M1 308 aa10.54□□□□□ -0.72
MSH6-201ENST00000234420 IL37Q9NZH6 218 aa10.54□□□□□ -0.72
MSH6-201ENST00000234420 TRAV18A0A075B6X5 111 aa10.54□□□□□ -0.72
MSH6-201ENST00000234420 C17orf113A0A1B0GUU1 675 aa10.54□□□□□ -0.72
MSH6-201ENST00000234420 TMEM235A6NFC5 223 aa10.54□□□□□ -0.72
MSH6-201ENST00000234420 ATXN7O15265 892 aaPredicted RBP10.54□□□□□ -0.72
MSH6-201ENST00000234420 SEMA4FO95754 770 aa10.54□□□□□ -0.72
MSH6-201ENST00000234420 PNMTP11086 282 aa10.54□□□□□ -0.72
MSH6-201ENST00000234420 ZNF33AQ06730 810 aa10.54□□□□□ -0.72
MSH6-201ENST00000234420 TSTD2Q5T7W7 516 aa10.54□□□□□ -0.72
MSH6-201ENST00000234420 ZNF687Q8N1G0 1237 aa10.54□□□□□ -0.72
MSH6-201ENST00000234420 FAM86B1Q8N7N1 296 aa10.54□□□□□ -0.72
MSH6-201ENST00000234420 ZFP90Q8TF47 636 aa10.54□□□□□ -0.72
MSH6-201ENST00000234420 FOXN4Q96NZ1 517 aa10.54□□□□□ -0.72
MSH6-201ENST00000234420 SPOCK3Q9BQ16 436 aa10.54□□□□□ -0.72
MSH6-201ENST00000234420 LUZP4Q9P127 313 aa10.54□□□□□ -0.72
MSH6-201ENST00000234420 KLHL42Q9P2K6 505 aa10.54□□□□□ -0.72
MSH6-201ENST00000234420 VPS29Q9UBQ0 182 aa10.54□□□□□ -0.72
MSH6-201ENST00000234420 GAB2Q9UQC2 676 aa10.54□□□□□ -0.72
MSH6-201ENST00000234420 BOLA1Q9Y3E2 137 aa10.54□□□□□ -0.72
MSH6-201ENST00000234420 YIPF1Q9Y548 306 aa10.54□□□□□ -0.72
MSH6-201ENST00000234420 ABCC3O15438 1527 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 ADGRB3O60242 1522 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 NDST3O95803 873 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 HOXB9P17482 250 aaPredicted RBP10.53□□□□□ -0.72
MSH6-201ENST00000234420 OXTRP30559 389 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 GPR19Q15760 415 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 MEDAGQ5VYS4 303 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 FAM205BPQ63HN1 556 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 RPS27LQ71UM5 84 aaKnown RBP10.53□□□□□ -0.72
MSH6-201ENST00000234420 GID4Q8IVV7 300 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 OR2T27Q8NH04 317 aa10.53□□□□□ -0.72
MSH6-201ENST00000234420 IL1F10Q8WWZ1 152 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms