RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 CPA2P48052 419 aa13.59□□□□□ -0.23
UPK3A-201ENST00000216211 GAS1P54826 345 aa13.59□□□□□ -0.23
UPK3A-201ENST00000216211 CLDN18P56856 261 aa13.59□□□□□ -0.23
UPK3A-201ENST00000216211 C2orf80Q0P641 193 aa13.59□□□□□ -0.23
UPK3A-201ENST00000216211 ZNF155Q12901 538 aaPredicted RBP13.59□□□□□ -0.23
UPK3A-201ENST00000216211 SH2D4BQ5SQS7 431 aa13.59□□□□□ -0.23
UPK3A-201ENST00000216211 AAGABQ6PD74 315 aa13.59□□□□□ -0.23
UPK3A-201ENST00000216211 PAMR1Q6UXH9 720 aa13.59□□□□□ -0.23
UPK3A-201ENST00000216211 GCNT2Q8N0V5 402 aa13.59□□□□□ -0.23
UPK3A-201ENST00000216211 CCNYL1Q8N7R7 359 aa13.59□□□□□ -0.23
UPK3A-201ENST00000216211 RNF138Q8WVD3 245 aa13.59□□□□□ -0.23
UPK3A-201ENST00000216211 WNT2BQ93097 391 aa13.59□□□□□ -0.23
UPK3A-201ENST00000216211 ZFP3Q96NJ6 502 aa13.59□□□□□ -0.23
UPK3A-201ENST00000216211 UCN2Q96RP3 112 aa13.59□□□□□ -0.23
UPK3A-201ENST00000216211 MANSC1Q9H8J5 431 aa13.59□□□□□ -0.23
UPK3A-201ENST00000216211 FGFR1OP2Q9NVK5 253 aa13.59□□□□□ -0.23
UPK3A-201ENST00000216211 SIRT5Q9NXA8 310 aa13.59□□□□□ -0.23
UPK3A-201ENST00000216211 GALNT8Q9NY28 637 aa13.59□□□□□ -0.23
UPK3A-201ENST00000216211 CLCF1Q9UBD9 225 aa13.59□□□□□ -0.23
UPK3A-201ENST00000216211 EMCNQ9ULC0 261 aa13.59□□□□□ -0.23
UPK3A-201ENST00000216211 EDARQ9UNE0 448 aa13.59□□□□□ -0.23
UPK3A-201ENST00000216211 OR10H1Q9Y4A9 318 aa13.59□□□□□ -0.23
UPK3A-201ENST00000216211 MYO1GB0I1T2 1018 aa13.58□□□□□ -0.24
UPK3A-201ENST00000216211 EBAG9O00559 213 aa13.58□□□□□ -0.24
UPK3A-201ENST00000216211 SCO2O43819 266 aa13.58□□□□□ -0.24
UPK3A-201ENST00000216211 ZIC3O60481 467 aa13.58□□□□□ -0.24
UPK3A-201ENST00000216211 PLIN3O60664 434 aa13.58□□□□□ -0.24
UPK3A-201ENST00000216211 EDF1O60869 148 aaKnown RBP13.58□□□□□ -0.24
UPK3A-201ENST00000216211 JUNP05412 331 aaKnown RBP13.58□□□□□ -0.24
UPK3A-201ENST00000216211 BPGMP07738 259 aa13.58□□□□□ -0.24
UPK3A-201ENST00000216211 KLK2P20151 261 aa13.58□□□□□ -0.24
UPK3A-201ENST00000216211 DDCP20711 480 aa13.58□□□□□ -0.24
UPK3A-201ENST00000216211 MC3RP41968 323 aa13.58□□□□□ -0.24
UPK3A-201ENST00000216211 GSTM5P46439 218 aa13.58□□□□□ -0.24
UPK3A-201ENST00000216211 NCBP2P52298 156 aaKnown RBP eCLIP13.58□□□□□ -0.24
UPK3A-201ENST00000216211 PSG6Q00889 435 aa13.58□□□□□ -0.24
UPK3A-201ENST00000216211 ZNF763Q0D2J5 394 aa13.58□□□□□ -0.24
UPK3A-201ENST00000216211 POU4F3Q15319 338 aa13.58□□□□□ -0.24
UPK3A-201ENST00000216211 IMPG1Q17R60 797 aa13.58□□□□□ -0.24
UPK3A-201ENST00000216211 CCDC153Q494R4 210 aa13.58□□□□□ -0.24
UPK3A-201ENST00000216211 TMEM107Q6UX40 140 aa13.58□□□□□ -0.24
UPK3A-201ENST00000216211 GRAMD2AQ8IUY3 354 aa13.58□□□□□ -0.24
UPK3A-201ENST00000216211 OR4K17Q8NGC6 315 aa13.58□□□□□ -0.24
UPK3A-201ENST00000216211 RAB3IL1Q8TBN0 382 aa13.58□□□□□ -0.24
UPK3A-201ENST00000216211 DTNBP1Q96EV8 351 aa13.58□□□□□ -0.24
UPK3A-201ENST00000216211 ELAC2Q9BQ52 826 aaKnown RBP13.58□□□□□ -0.24
UPK3A-201ENST00000216211 YIPF4Q9BSR8 244 aa13.58□□□□□ -0.24
UPK3A-201ENST00000216211 PPP4R1LQ9P1A2 415 aa13.58□□□□□ -0.24
UPK3A-201ENST00000216211 MRPS18CQ9Y3D5 142 aaKnown RBP13.58□□□□□ -0.24
UPK3A-201ENST00000216211 POLR3HQ9Y535 204 aaPredicted RBP13.58□□□□□ -0.24
UPK3A-201ENST00000216211 ABCA4P78363 2273 aa13.58□□□□□ -0.24
UPK3A-201ENST00000216211 WDR91A4D1P6 747 aa13.57□□□□□ -0.24
UPK3A-201ENST00000216211 G3V2L1 256 aa13.57□□□□□ -0.24
UPK3A-201ENST00000216211 SNX3O60493 162 aa13.57□□□□□ -0.24
UPK3A-201ENST00000216211 COQ9O75208 318 aa13.57□□□□□ -0.24
UPK3A-201ENST00000216211 TGM6O95932 706 aa13.57□□□□□ -0.24
UPK3A-201ENST00000216211 RAF1P04049 648 aa13.57□□□□□ -0.24
UPK3A-201ENST00000216211 PROCP04070 461 aa13.57□□□□□ -0.24
UPK3A-201ENST00000216211 MYL2P10916 166 aa13.57□□□□□ -0.24
UPK3A-201ENST00000216211 CHMP24386 653 aa13.57□□□□□ -0.24
UPK3A-201ENST00000216211 EVI2BP34910 448 aa13.57□□□□□ -0.24
UPK3A-201ENST00000216211 DSCR4P56555 118 aaPredicted RBP13.57□□□□□ -0.24
UPK3A-201ENST00000216211 B3GALT5-AS1P59052 145 aa13.57□□□□□ -0.24
UPK3A-201ENST00000216211 PSPHP78330 225 aa13.57□□□□□ -0.24
UPK3A-201ENST00000216211 MRPS22P82650 360 aaKnown RBP13.57□□□□□ -0.24
UPK3A-201ENST00000216211 FAM71E1Q6IPT2 247 aa13.57□□□□□ -0.24
UPK3A-201ENST00000216211 NUDCD3Q8IVD9 361 aa13.57□□□□□ -0.24
UPK3A-201ENST00000216211 CCDC197Q8NCU1 140 aa13.57□□□□□ -0.24
UPK3A-201ENST00000216211 ALPK1Q96QP1 1244 aa13.57□□□□□ -0.24
UPK3A-201ENST00000216211 SHCBP1LQ9BZQ2 653 aa13.57□□□□□ -0.24
UPK3A-201ENST00000216211 DSN1Q9H410 356 aa13.57□□□□□ -0.24
UPK3A-201ENST00000216211 PLEKHF2Q9H8W4 249 aa13.57□□□□□ -0.24
UPK3A-201ENST00000216211 MIEF1Q9NQG6 463 aa13.57□□□□□ -0.24
UPK3A-201ENST00000216211 FLRT3Q9NZU0 649 aa13.57□□□□□ -0.24
UPK3A-201ENST00000216211 FLNAP21333 2647 aaKnown RBP13.56□□□□□ -0.24
UPK3A-201ENST00000216211 A0A087WV62 115 aa13.56□□□□□ -0.24
UPK3A-201ENST00000216211 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.56□□□□□ -0.24
UPK3A-201ENST00000216211 SH3D21A4FU49 640 aa13.56□□□□□ -0.24
UPK3A-201ENST00000216211 HCRTR2O43614 444 aa13.56□□□□□ -0.24
UPK3A-201ENST00000216211 TNFSF13O75888 250 aa13.56□□□□□ -0.24
UPK3A-201ENST00000216211 ATE1O95260 518 aa13.56□□□□□ -0.24
UPK3A-201ENST00000216211 BGNP21810 368 aa13.56□□□□□ -0.24
UPK3A-201ENST00000216211 DIO3P55073 304 aa13.56□□□□□ -0.24
UPK3A-201ENST00000216211 FOXD4Q12950 439 aaPredicted RBP13.56□□□□□ -0.24
UPK3A-201ENST00000216211 GAB1Q13480 694 aa13.56□□□□□ -0.24
UPK3A-201ENST00000216211 CGB2Q6NT52 195 aa13.56□□□□□ -0.24
UPK3A-201ENST00000216211 C6orf89Q6UWU4 347 aa13.56□□□□□ -0.24
UPK3A-201ENST00000216211 ZYG11AQ6WRX3 759 aa13.56□□□□□ -0.24
UPK3A-201ENST00000216211 FRMD7Q6ZUT3 714 aa13.56□□□□□ -0.24
UPK3A-201ENST00000216211 P4HA3Q7Z4N8 544 aa13.56□□□□□ -0.24
UPK3A-201ENST00000216211 CAMKMTQ7Z624 323 aa13.56□□□□□ -0.24
UPK3A-201ENST00000216211 UBQLNLQ8IYU4 475 aa13.56□□□□□ -0.24
UPK3A-201ENST00000216211 FADS6Q8N9I5 356 aa13.56□□□□□ -0.24
UPK3A-201ENST00000216211 OR2M3Q8NG83 312 aa13.56□□□□□ -0.24
UPK3A-201ENST00000216211 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.56□□□□□ -0.24
UPK3A-201ENST00000216211 MBD6Q96DN6 1003 aa13.56□□□□□ -0.24
UPK3A-201ENST00000216211 CCDC126Q96EE4 140 aa13.56□□□□□ -0.24
UPK3A-201ENST00000216211 RTN4RQ9BZR6 473 aa13.56□□□□□ -0.24
UPK3A-201ENST00000216211 PIGMQ9H3S5 423 aa13.56□□□□□ -0.24
UPK3A-201ENST00000216211 GLIPR2Q9H4G4 154 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms