RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Bmt2Q8BXK4 403 aa17.59■□□□□ 0.41
Trim71-201ENSMUST00000111816 Eri3Q8C460 337 aa17.59■□□□□ 0.41
Trim71-201ENSMUST00000111816 Nme7Q9QXL8 395 aa17.59■□□□□ 0.41
Trim71-201ENSMUST00000111816 Olfr671A0A1B0GSN5 317 aa17.58■□□□□ 0.41
Trim71-201ENSMUST00000111816 Mrap2D3Z1Q2 207 aa17.58■□□□□ 0.41
Trim71-201ENSMUST00000111816 NfkbieO54910 364 aa17.58■□□□□ 0.41
Trim71-201ENSMUST00000111816 Cyp1a1P00184 524 aa17.58■□□□□ 0.41
Trim71-201ENSMUST00000111816 Olfr270Q7TS19 314 aa17.58■□□□□ 0.41
Trim71-201ENSMUST00000111816 Hnrnpa3Q8BG05 379 aaKnown RBP17.58■□□□□ 0.41
Trim71-201ENSMUST00000111816 PgcQ9D7R7 392 aa17.58■□□□□ 0.41
Trim71-201ENSMUST00000111816 Sh2b2Q9JID9 621 aa17.58■□□□□ 0.41
Trim71-201ENSMUST00000111816 Minpp1Q9Z2L6 481 aa17.58■□□□□ 0.41
Trim71-201ENSMUST00000111816 Arhgef17Q80U35 2057 aa17.58■□□□□ 0.41
Trim71-201ENSMUST00000111816 Gm7073E9QAS1 335 aa17.58■□□□□ 0.41
Trim71-201ENSMUST00000111816 Dpysl2O08553 572 aaKnown RBP17.58■□□□□ 0.41
Trim71-201ENSMUST00000111816 Epha5Q60629 876 aa17.58■□□□□ 0.41
Trim71-201ENSMUST00000111816 Amer2Q8CCJ4 672 aa17.58■□□□□ 0.41
Trim71-201ENSMUST00000111816 Olfr883Q8VF64 309 aa17.58■□□□□ 0.41
Trim71-201ENSMUST00000111816 Txndc5Q91W90 417 aa17.58■□□□□ 0.41
Trim71-201ENSMUST00000111816 Tmem2Q5FWI3 1383 aa17.58■□□□□ 0.41
Trim71-201ENSMUST00000111816 Dmrta2A2A9A2 531 aa17.58■□□□□ 0.41
Trim71-201ENSMUST00000111816 Entpd2O55026 495 aa17.58■□□□□ 0.41
Trim71-201ENSMUST00000111816 Ube2g2P60605 165 aa17.58■□□□□ 0.41
Trim71-201ENSMUST00000111816 Aup1P70295 410 aa17.58■□□□□ 0.41
Trim71-201ENSMUST00000111816 Ldb1P70662 411 aa17.58■□□□□ 0.41
Trim71-201ENSMUST00000111816 Ccbe1Q3MI99 408 aa17.58■□□□□ 0.41
Trim71-201ENSMUST00000111816 Olfr765Q7TRI6 309 aa17.58■□□□□ 0.41
Trim71-201ENSMUST00000111816 Gpr37l1Q99JG2 481 aa17.58■□□□□ 0.41
Trim71-201ENSMUST00000111816 Pcbd2Q9CZL5 136 aa17.58■□□□□ 0.41
Trim71-201ENSMUST00000111816 Tsga13Q9DA17 273 aa17.58■□□□□ 0.41
Trim71-201ENSMUST00000111816 Olfr27Q9EQ90 311 aa17.58■□□□□ 0.41
Trim71-201ENSMUST00000111816 TmppeD3Z286 447 aa17.58■□□□□ 0.4
Trim71-201ENSMUST00000111816 Vmn2r105E9Q3A5 860 aa17.58■□□□□ 0.4
Trim71-201ENSMUST00000111816 Olfr550E9Q544 316 aa17.58■□□□□ 0.4
Trim71-201ENSMUST00000111816 Olfr427E9Q7E7 315 aa17.58■□□□□ 0.4
Trim71-201ENSMUST00000111816 Pbx2O35984 430 aa17.58■□□□□ 0.4
Trim71-201ENSMUST00000111816 Tnfrsf8Q60846 498 aa17.58■□□□□ 0.4
Trim71-201ENSMUST00000111816 Olfr1219Q7TR04 311 aa17.58■□□□□ 0.4
Trim71-201ENSMUST00000111816 Q8R3C1 574 aa17.58■□□□□ 0.4
Trim71-201ENSMUST00000111816 Twist2Q9D030 160 aa17.58■□□□□ 0.4
Trim71-201ENSMUST00000111816 Acox2Q9QXD1 681 aa17.58■□□□□ 0.4
Trim71-201ENSMUST00000111816 Dock6Q8VDR9 2080 aa17.58■□□□□ 0.4
Trim71-201ENSMUST00000111816 Olfr1025-ps1A0A140T8K3 312 aa17.58■□□□□ 0.4
Trim71-201ENSMUST00000111816 Glb1l3A2RSQ1 649 aa17.58■□□□□ 0.4
Trim71-201ENSMUST00000111816 InhaQ04997 366 aa17.58■□□□□ 0.4
Trim71-201ENSMUST00000111816 Doxl2Q6IMK7 723 aa17.58■□□□□ 0.4
Trim71-201ENSMUST00000111816 Olfr744Q7TRM0 323 aa17.58■□□□□ 0.4
Trim71-201ENSMUST00000111816 Ubap2lQ80X50 1107 aaKnown RBP17.58■□□□□ 0.4
Trim71-201ENSMUST00000111816 Ablim2Q8BL65 612 aa17.58■□□□□ 0.4
Trim71-201ENSMUST00000111816 Ssxb2Q8C5Z3 165 aa17.58■□□□□ 0.4
Trim71-201ENSMUST00000111816 Rnf130Q8VEM1 419 aa17.58■□□□□ 0.4
Trim71-201ENSMUST00000111816 Tex19.2Q9D5S1 317 aa17.58■□□□□ 0.4
Trim71-201ENSMUST00000111816 Olfr190K7N5T5 307 aa17.58■□□□□ 0.4
Trim71-201ENSMUST00000111816 Sema6bO54951 886 aa17.58■□□□□ 0.4
Trim71-201ENSMUST00000111816 Nkx3-2P97503 333 aa17.58■□□□□ 0.4
Trim71-201ENSMUST00000111816 Patz1Q5NBY9 687 aaKnown RBP17.58■□□□□ 0.4
Trim71-201ENSMUST00000111816 Tgm4Q8BZH1 670 aa17.58■□□□□ 0.4
Trim71-201ENSMUST00000111816 Cdt1Q8R4E9 557 aa17.58■□□□□ 0.4
Trim71-201ENSMUST00000111816 Lcn9Q9D267 178 aa17.58■□□□□ 0.4
Trim71-201ENSMUST00000111816 Acox1Q9R0H0 661 aaKnown RBP17.58■□□□□ 0.4
Trim71-201ENSMUST00000111816 Cst9Q9Z0H6 137 aa17.58■□□□□ 0.4
Trim71-201ENSMUST00000111816 Adamts3E9Q287 1204 aa17.58■□□□□ 0.4
Trim71-201ENSMUST00000111816 Kcng2F7A6P6 480 aa17.58■□□□□ 0.4
Trim71-201ENSMUST00000111816 Gm8265K7N6Y8 158 aa17.58■□□□□ 0.4
Trim71-201ENSMUST00000111816 ToporsQ80Z37 1033 aa17.58■□□□□ 0.4
Trim71-201ENSMUST00000111816 Olfr371Q8VGB8 312 aa17.58■□□□□ 0.4
Trim71-201ENSMUST00000111816 SharpinQ91WA6 380 aa17.58■□□□□ 0.4
Trim71-201ENSMUST00000111816 Scgb1b27Q91WB5 92 aa17.58■□□□□ 0.4
Trim71-201ENSMUST00000111816 Ogfod2Q9CQ04 349 aa17.58■□□□□ 0.4
Trim71-201ENSMUST00000111816 Cyp2u1Q9CX98 530 aa17.58■□□□□ 0.4
Trim71-201ENSMUST00000111816 Bcl7aQ9CXE2 210 aa17.58■□□□□ 0.4
Trim71-201ENSMUST00000111816 Irf2P23906 349 aa17.57■□□□□ 0.4
Trim71-201ENSMUST00000111816 Hoxd13P70217 339 aa17.57■□□□□ 0.4
Trim71-201ENSMUST00000111816 TrmoQ562D6 431 aa17.57■□□□□ 0.4
Trim71-201ENSMUST00000111816 Rfc3Q8R323 356 aaKnown RBP17.57■□□□□ 0.4
Trim71-201ENSMUST00000111816 Depdc5P61460 1591 aa17.57■□□□□ 0.4
Trim71-201ENSMUST00000111816 Olfr420E9Q4G0 321 aa17.57■□□□□ 0.4
Trim71-201ENSMUST00000111816 Stc1O55183 247 aa17.57■□□□□ 0.4
Trim71-201ENSMUST00000111816 Itgb5O70309 798 aa17.57■□□□□ 0.4
Trim71-201ENSMUST00000111816 Vmn2r81Q80Z09 865 aa17.57■□□□□ 0.4
Trim71-201ENSMUST00000111816 Exosc6Q8BTW3 273 aa17.57■□□□□ 0.4
Trim71-201ENSMUST00000111816 Ube2l6Q9QZU9 153 aa17.57■□□□□ 0.4
Trim71-201ENSMUST00000111816 Vmn2r-ps130A0A140T8U3 855 aa17.57■□□□□ 0.4
Trim71-201ENSMUST00000111816 Vmn2r84D3YWE3 849 aa17.57■□□□□ 0.4
Trim71-201ENSMUST00000111816 Dcdc2bF7BCK0 340 aa17.57■□□□□ 0.4
Trim71-201ENSMUST00000111816 Nrp1P97333 923 aa17.57■□□□□ 0.4
Trim71-201ENSMUST00000111816 Msi1Q61474 362 aaKnown RBP17.57■□□□□ 0.4
Trim71-201ENSMUST00000111816 Dusp16Q6PCP3 660 aa17.57■□□□□ 0.4
Trim71-201ENSMUST00000111816 Scp2d1Q9DAH1 156 aa17.57■□□□□ 0.4
Trim71-201ENSMUST00000111816 Gm26992S4R1A3 76 aa17.57■□□□□ 0.4
Trim71-201ENSMUST00000111816 Shank2Q80Z38 1476 aa17.57■□□□□ 0.4
Trim71-201ENSMUST00000111816 Ralgps1A2AR50 585 aa17.57■□□□□ 0.4
Trim71-201ENSMUST00000111816 CtseP70269 397 aa17.57■□□□□ 0.4
Trim71-201ENSMUST00000111816 Fdxacb1Q3UY23 622 aa17.57■□□□□ 0.4
Trim71-201ENSMUST00000111816 Fam212bQ80VY2 300 aa17.57■□□□□ 0.4
Trim71-201ENSMUST00000111816 Batf2Q8R1H8 277 aa17.57■□□□□ 0.4
Trim71-201ENSMUST00000111816 QprtQ91X91 299 aa17.57■□□□□ 0.4
Trim71-201ENSMUST00000111816 Gm773Q3TML4 206 aa17.57■□□□□ 0.4
Trim71-201ENSMUST00000111816 Dnajb11Q99KV1 358 aa17.57■□□□□ 0.4
Trim71-201ENSMUST00000111816 TesclQ9DAJ7 231 aa17.57■□□□□ 0.4
Retrieved 100 of 22,080 RNA–protein pairs in 26.8 ms