RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 Atg13Q91YI1 516 aa7.83□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Mfsd10Q9D2V8 456 aaKnown RBP7.83□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Trim3Q9R1R2 744 aa7.83□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Eci2Q9WUR2 391 aa7.83□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Gm35911A0A1D5RLS7 214 aa7.83□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Gm436B1AVU6 407 aa7.83□□□□□ -1.16
Cdc40-201ENSMUST00000044166 SnrpgP62309 76 aaKnown RBP7.83□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Wbp2P97765 261 aa7.83□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Tmprss11cQ1JRP2 431 aa7.83□□□□□ -1.16
Cdc40-201ENSMUST00000044166 XylbQ3TNA1 551 aa7.83□□□□□ -1.16
Cdc40-201ENSMUST00000044166 LipnQ3U4B4 400 aa7.83□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Pak6Q3ULB5 682 aa7.83□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Mep1bQ61847 704 aa7.83□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Cdk6Q64261 326 aa7.83□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Olig3Q6PFG8 273 aa7.83□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Cramp1Q6PG95 1285 aa7.83□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Tas2r117Q7M715 330 aa7.83□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Med26Q7TN02 588 aa7.83□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Prr11Q8BHE0 368 aa7.83□□□□□ -1.16
Cdc40-201ENSMUST00000044166 BC024139Q8BVJ3 772 aa7.83□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Fam46bQ8C152 427 aa7.83□□□□□ -1.16
Cdc40-201ENSMUST00000044166 C1raQ8CG16 707 aa7.83□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Unc5aQ8K1S4 898 aa7.83□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Map3k21Q8VDG6 1002 aa7.83□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Olfr818Q8VG46 318 aa7.83□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Dnajb11Q99KV1 358 aa7.83□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Mlf2Q99KX1 247 aa7.83□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Cby3Q9CVN6 235 aa7.83□□□□□ -1.16
Cdc40-201ENSMUST00000044166 9230112D13RikQ9D260 137 aa7.83□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Tanc1Q0VGY8 1856 aa7.83□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Xlr5bA2BI50 236 aa7.83□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Cped1B2RX70 1026 aa7.83□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Vmn2r56E9Q4U5 779 aa7.83□□□□□ -1.16
Cdc40-201ENSMUST00000044166 1700014D04RikJ3QMS2 983 aa7.83□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Gm8229K7N749 213 aa7.83□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Vmn1r16K7N775 303 aa7.83□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Sp1O89090 784 aa7.83□□□□□ -1.16
Cdc40-201ENSMUST00000044166 SnrpeP62305 92 aaKnown RBP7.83□□□□□ -1.16
Cdc40-201ENSMUST00000044166 1700066B19RikQ3TS39 127 aa7.83□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Usp30Q3UN04 517 aa7.83□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Igfbp7Q61581 281 aa7.83□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Gramd2bQ6PEM6 445 aa7.83□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Calm5Q6W3E0 140 aa7.83□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Metap1Q8BP48 386 aaKnown RBP7.83□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Wdfy2Q8BUB4 400 aa7.83□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Cdkl1Q8CEQ0 352 aa7.83□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Cdc123Q8CII2 336 aa7.83□□□□□ -1.16
Cdc40-201ENSMUST00000044166 PiguQ8K358 434 aa7.83□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Foxn4Q8K3Q3 521 aa7.83□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Vmn1r192Q8K4C9 300 aa7.83□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Med17Q8VCD5 649 aaKnown RBP7.83□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Olfr166Q8VGX2 312 aa7.83□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Wasf3Q8VHI6 501 aa7.83□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Tram1Q91V04 374 aa7.83□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Ap3s1Q9DCR2 193 aa7.83□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Arfgap1Q9EPJ9 414 aa7.83□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Vmn1r29Q9EQ41 303 aa7.83□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Btbd35f23A0A0R4J2B9 498 aa7.82□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Igkv12-46A0A140T8P6 115 aa7.82□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Dcaf4A0A1Y7VNZ0 532 aa7.82□□□□□ -1.16
Cdc40-201ENSMUST00000044166 FcmrA1KXC4 422 aa7.82□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Cyp2b23E9Q593 491 aa7.82□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Glyatl3E9Q5L8 290 aa7.82□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Zfp995E9Q6M3 437 aa7.82□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Gm9493F6SVV1 192 aaKnown RBP7.82□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Aldh3b3J3QMK6 479 aa7.82□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Gm3099J3QPA5 205 aa7.82□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Hax1O35387 280 aa7.82□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Slc6a2O55192 617 aa7.82□□□□□ -1.16
Cdc40-201ENSMUST00000044166 FhitO89106 150 aa7.82□□□□□ -1.16
Cdc40-201ENSMUST00000044166 CryaaP24622 196 aa7.82□□□□□ -1.16
Cdc40-201ENSMUST00000044166 AhrP30561 848 aa7.82□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Rps7P62082 194 aaKnown RBP7.82□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Olfr591Q7TRR7 314 aa7.82□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Adamtsl4Q80T21 1036 aa7.82□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Rims3Q80U57 307 aa7.82□□□□□ -1.16
Cdc40-201ENSMUST00000044166 McubQ810S1 345 aa7.82□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Q8BHB7 409 aa7.82□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Gprin3Q8BWS5 763 aa7.82□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Frmd6Q8C0V9 622 aa7.82□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Pqlc3Q8C6U2 202 aa7.82□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Spns1Q8R0G7 528 aa7.82□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Uhrf1Q8VDF2 782 aaKnown RBP7.82□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Olfr48Q8VGN4 301 aa7.82□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Olfr676Q8VGZ9 317 aa7.82□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Lims1Q99JW4 325 aa7.82□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Ms4a10Q99N03 267 aa7.82□□□□□ -1.16
Cdc40-201ENSMUST00000044166 1700029F12RikQ9CRB4 147 aa7.82□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Slc38a3Q9DCP2 505 aa7.82□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Prl5a1Q9JII2 230 aa7.82□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Stub1Q9WUD1 304 aa7.82□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Dio2Q9Z1Y9 266 aa7.82□□□□□ -1.16
Cdc40-201ENSMUST00000044166 CorinQ9Z319 1113 aa7.82□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Trav5-4A0A075B652 114 aa7.82□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Olfr65A0A1B0GSF4 315 aa7.82□□□□□ -1.16
Cdc40-201ENSMUST00000044166 4932443I19RikA0A286YE38 169 aa7.82□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Mettl23A2AA28 253 aa7.82□□□□□ -1.16
Cdc40-201ENSMUST00000044166 LexmA2AVQ5 414 aa7.82□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Gm4969D3YZT1 566 aa7.82□□□□□ -1.16
Cdc40-201ENSMUST00000044166 Gm1330D3Z460 184 aa7.82□□□□□ -1.16
Retrieved 100 of 22,080 RNA–protein pairs in 26.3 ms