RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Nmral1Q8K2T1 309 aa15.88■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Vmn1r75Q8R289 305 aa15.88■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Oosp1Q925U0 202 aa15.88■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Ndufaf7Q9CWG8 436 aa15.88■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Mfsd10Q9D2V8 456 aaKnown RBP15.88■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Spaca1Q9DA48 305 aa15.88■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Adam21Q9JI76 729 aa15.88■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Cldn7Q9Z261 211 aa15.88■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Olfr592E9PYB3 312 aa15.87■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Yap1P46938 488 aa15.87■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Inpp5jP59644 1003 aa15.87■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Gpr137Q80ZU9 396 aa15.87■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Tcf25Q8R3L2 676 aaKnown RBP15.87■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Steap1Q9CWR7 339 aa15.87■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Ankrd7Q9D504 279 aa15.87■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Zbtb25G3UW50 439 aa15.87■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Hsd17b12O70503 312 aa15.87■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Zdhhc20Q5Y5T1 380 aa15.87■□□□□ 0.13
Ctcf-201ENSMUST00000005841 N6amt1Q6SKR2 214 aa15.87■□□□□ 0.13
Ctcf-201ENSMUST00000005841 LcorQ6ZPI3 433 aa15.87■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Lgi4Q8K1S1 537 aa15.87■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Olfr108Q8VFA1 320 aa15.87■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Olfr535Q8VGL3 312 aa15.87■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Ap1s2Q9DB50 160 aa15.87■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Nrip3Q9JJR9 240 aa15.87■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Thsd1Q9JM61 851 aa15.87■□□□□ 0.13
Ctcf-201ENSMUST00000005841 1700028J19RikA0A0U1RP08 172 aa15.87■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Hoxb6P09023 224 aa15.87■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Gpr3P35413 330 aa15.87■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Cct3P80318 545 aaKnown RBP15.87■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Zmiz1Q6P1E1 1072 aa15.87■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Carnmt1Q80UY1 400 aa15.87■□□□□ 0.13
Ctcf-201ENSMUST00000005841 C130079G13RikQ8BUY2 280 aa15.87■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Cst11Q9D269 139 aa15.87■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Btbd35f23A0A0R4J2B9 498 aa15.86■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Vmn1r176G3UW31 304 aa15.86■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Grxcr2Q3TYR5 254 aa15.86■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Crtc2Q3U182 692 aa15.86■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Crhr2Q60748 411 aa15.86■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Dvl2Q60838 736 aa15.86■□□□□ 0.13
Ctcf-201ENSMUST00000005841 AY358078Q6UY53 465 aa15.86■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Gprc5aQ8BHL4 356 aa15.86■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Olfr1232Q8VEX7 311 aa15.86■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Fam69aQ9D6I7 428 aa15.86■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Tmem27Q9ESG4 222 aa15.86■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Lhx9Q9WUH2 397 aa15.86■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Zfp68Q9Z116 606 aa15.86■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Gm13420A0A140LJJ2 248 aa15.86■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Gm13285B1AYI3 182 aa15.86■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Gm13275B1AYI8 182 aa15.86■□□□□ 0.13
Ctcf-201ENSMUST00000005841 P01644 108 aa15.86■□□□□ 0.13
Ctcf-201ENSMUST00000005841 P01645 108 aa15.86■□□□□ 0.13
Ctcf-201ENSMUST00000005841 P01646 108 aa15.86■□□□□ 0.13
Ctcf-201ENSMUST00000005841 P01647 108 aa15.86■□□□□ 0.13
Ctcf-201ENSMUST00000005841 LplP11152 474 aa15.86■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Ptger4P32240 513 aa15.86■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Hoxd13P70217 339 aa15.86■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Slc9a3r1P70441 355 aa15.86■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Map3k8Q07174 467 aa15.86■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Ctf1Q60753 203 aa15.86■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Lrrc75aQ7TSF4 339 aa15.86■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Olfr70Q80ZX9 316 aa15.86■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Slc39a9Q8BFU1 308 aa15.86■□□□□ 0.13
Ctcf-201ENSMUST00000005841 IfnzQ8BQT1 182 aa15.86■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Ankrd46Q8BTZ5 228 aa15.86■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Lcmt2Q8BYR1 686 aa15.86■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Gm13278Q8CD73 182 aa15.86■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Msantd3Q9CR78 275 aa15.86■□□□□ 0.13
Ctcf-201ENSMUST00000005841 FtmtQ9D5H4 237 aa15.86■□□□□ 0.13
Ctcf-201ENSMUST00000005841 DiabloQ9JIQ3 237 aa15.86■□□□□ 0.13
Ctcf-201ENSMUST00000005841 AireQ9Z0E3 552 aa15.86■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Gm34653A0A1L1SR01 368 aa15.86■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Gm6356L7N2A7 188 aa15.86■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Fmo1P50285 532 aa15.86■□□□□ 0.13
Ctcf-201ENSMUST00000005841 4930480E11RikQ0VG34 394 aa15.86■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Surf4Q64310 269 aa15.86■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Gba2Q69ZF3 918 aa15.86■□□□□ 0.13
Ctcf-201ENSMUST00000005841 IfnkQ7TSL0 199 aa15.86■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Micu2Q8CD10 432 aa15.86■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Pex12Q8VC48 359 aa15.86■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Olfr170Q8VGL6 313 aa15.86■□□□□ 0.13
Ctcf-201ENSMUST00000005841 D6Wsu163eQ91YN0 552 aa15.86■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Rwdd2bQ99M03 290 aa15.86■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Q9D112 206 aa15.86■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Gm35911A0A1D5RLS7 214 aa15.85■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Zfp870J3QMA4 560 aa15.85■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Spsb2O88838 264 aa15.85■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Drd2P61168 444 aa15.85■□□□□ 0.13
Ctcf-201ENSMUST00000005841 ArsgQ3TYD4 525 aa15.85■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Hectd3Q3U487 861 aa15.85■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Shisa3Q3UPR0 238 aa15.85■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Gm136Q3V037 328 aa15.85■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Pnliprp1Q5BKQ4 473 aa15.85■□□□□ 0.13
Ctcf-201ENSMUST00000005841 ToxQ66JW3 526 aa15.85■□□□□ 0.13
Ctcf-201ENSMUST00000005841 IpmkQ7TT16 396 aa15.85■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Mrgprb4Q91ZC0 321 aa15.85■□□□□ 0.13
Ctcf-201ENSMUST00000005841 TympQ99N42 471 aa15.85■□□□□ 0.13
Ctcf-201ENSMUST00000005841 NfkbizQ9EST8 728 aa15.85■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Vmn1r13G5E8I3 300 aa15.85■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Ifi203O35368 408 aa15.85■□□□□ 0.13
Retrieved 100 of 22,080 RNA–protein pairs in 25.5 ms