RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Ephx1Q9D379 455 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 TsaccQ9DA44 124 aa12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Hapln1Q9QUP5 356 aaKnown RBP12.08□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Ankrd16A2AS55 361 aa12.07□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Wscd2D4PHA7 571 aa12.07□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Gm8374L7N2A9 172 aa12.07□□□□□ -0.48
Clcn3-201ENSMUST00000004430 B3galt2O54905 422 aa12.07□□□□□ -0.48
Clcn3-201ENSMUST00000004430 NfkbieO54910 364 aa12.07□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Sstr4P49660 385 aa12.07□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Dnaaf3Q3UYV8 586 aa12.07□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Ugt2a3Q8BWQ1 534 aa12.07□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Fbxl3Q8C4V4 428 aa12.07□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Zbtb26Q8C8S0 451 aa12.07□□□□□ -0.48
Clcn3-201ENSMUST00000004430 EfhbQ8CDU5 853 aa12.07□□□□□ -0.48
Clcn3-201ENSMUST00000004430 VitQ8VHI5 650 aa12.07□□□□□ -0.48
Clcn3-201ENSMUST00000004430 EdaraddQ8VHX2 208 aa12.07□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Fbxl12Q9EPX5 326 aa12.07□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Cpne6Q9Z140 557 aa12.07□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Ms4a4aA0A087WRT7 236 aa12.07□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Igkv5-45A0A0B4J1J1 115 aa12.07□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Vmn2r110E9PWD5 858 aa12.07□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Vmn2r98E9PZ56 857 aa12.07□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Olfr1425K7N659 312 aa12.07□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Rpl7P14148 270 aaKnown RBP12.07□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Acvr1P37172 509 aa12.07□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Cep76Q0VEJ0 659 aa12.07□□□□□ -0.48
Clcn3-201ENSMUST00000004430 UbqlnlQ14DL0 610 aa12.07□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Ranbp3lQ6PDH4 491 aa12.07□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Olfr699Q7TRN3 316 aa12.07□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Sez6Q7TSK2 991 aa12.07□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Pcdh19Q80TF3 1145 aa12.07□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Slitrk4Q810B8 837 aa12.07□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Fam25cQ8CF02 89 aa12.07□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Samd14Q8K070 417 aa12.07□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Slc22a6Q8VC69 545 aa12.07□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Olfr1426Q8VG74 311 aa12.07□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Olfr166Q8VGX2 312 aa12.07□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Hrh4Q91ZY2 391 aa12.07□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Timm22Q9CQ85 194 aa12.07□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Lpar2Q9JL06 348 aa12.07□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Tbl2Q9R099 442 aaKnown RBP12.07□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Asic5Q9R0Y1 495 aa12.07□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Rasal1Q9Z268 799 aa12.07□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Cfap77A0A087WRI3 283 aa12.07□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Gm8050L7N2E3 205 aa12.07□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Bcl7cO08664 217 aa12.07□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Anxa2P07356 339 aaKnown RBP12.07□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Acvr2aP27038 513 aa12.07□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Acod1P54987 488 aa12.07□□□□□ -0.48
Clcn3-201ENSMUST00000004430 JupQ02257 745 aaKnown RBP12.07□□□□□ -0.48
Clcn3-201ENSMUST00000004430 NnatQ61979 81 aa12.07□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Rftn1Q6A0D4 554 aa12.07□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Pla2g15Q8VEB4 412 aa12.07□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Gpr146Q99LE2 333 aa12.07□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Tm9sf3Q9ET30 587 aa12.07□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Calm4Q9JM83 148 aa12.07□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Olfr1188A2AV10 312 aa12.06□□□□□ -0.48
Clcn3-201ENSMUST00000004430 SelenonD3Z2R5 557 aa12.06□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Olfr730E9Q8M3 318 aa12.06□□□□□ -0.48
Clcn3-201ENSMUST00000004430 5730507C01RikJ3QPX0 416 aa12.06□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Rasd1O35626 280 aa12.06□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Pcdh12O55134 1180 aa12.06□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Etv2P41163 335 aa12.06□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Igfbp1P47876 272 aa12.06□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Tbx4P70325 552 aa12.06□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Tmem64Q3U145 381 aa12.06□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Crhr2Q60748 411 aa12.06□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Pum2Q80U58 1066 aaKnown RBP12.06□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Ostm1Q8BGT0 338 aa12.06□□□□□ -0.48
Clcn3-201ENSMUST00000004430 FkrpQ8CG64 494 aa12.06□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Adam4Q8CGQ2 763 aa12.06□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Vmn1r32Q8R2D9 302 aa12.06□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Aspscr1Q8VBT9 550 aa12.06□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Olfr103Q920Y8 313 aa12.06□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Pbx4Q99NE9 378 aa12.06□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Gm21497A0A087WRK3 222 aa12.06□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Trmt1lA2RSY6 728 aaKnown RBP12.06□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Nxpe3B9EKK6 559 aa12.06□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Hist1h2abC0HKE1 130 aa12.06□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Hist1h2acC0HKE2 130 aa12.06□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Hist1h2adC0HKE3 130 aa12.06□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Hist1h2aeC0HKE4 130 aa12.06□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Hist1h2agC0HKE5 130 aa12.06□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Hist1h2aiC0HKE6 130 aa12.06□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Hist1h2anC0HKE7 130 aa12.06□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Hist1h2aoC0HKE8 130 aa12.06□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Hist1h2apC0HKE9 130 aa12.06□□□□□ -0.48
Clcn3-201ENSMUST00000004430 8030474K03RikE9Q4Y8 554 aa12.06□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Nme6O88425 189 aa12.06□□□□□ -0.48
Clcn3-201ENSMUST00000004430 AdaP03958 352 aa12.06□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Folr1P35846 255 aa12.06□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Rplp2P99027 115 aaKnown RBP12.06□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Foxk2Q3UCQ1 651 aa12.06□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Rnft2Q3UF64 445 aa12.06□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Hist3h2aQ8BFU2 130 aaKnown RBP12.06□□□□□ -0.48
Clcn3-201ENSMUST00000004430 C5ar2Q8BW93 344 aa12.06□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Hist1h2afQ8CGP5 130 aa12.06□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Hist1h2ahQ8CGP6 128 aa12.06□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Hist1h2akQ8CGP7 130 aa12.06□□□□□ -0.48
Clcn3-201ENSMUST00000004430 Q8K039 155 aa12.06□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 28.1 ms