RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 CD47Q08722 323 aa15.3■□□□□ 0.04
PHGDH-216ENST00000641375 TOP3AQ13472 1001 aaPredicted RBP15.3■□□□□ 0.04
PHGDH-216ENST00000641375 PIN1Q13526 163 aaPredicted RBP15.3■□□□□ 0.04
PHGDH-216ENST00000641375 DSG2Q14126 1118 aa15.3■□□□□ 0.04
PHGDH-216ENST00000641375 ZNF528Q3MIS6 628 aa15.3■□□□□ 0.04
PHGDH-216ENST00000641375 EIPR1Q53HC9 387 aa15.3■□□□□ 0.04
PHGDH-216ENST00000641375 TRIM61Q5EBN2 209 aa15.3■□□□□ 0.04
PHGDH-216ENST00000641375 PERM1Q5SV97 790 aa15.3■□□□□ 0.04
PHGDH-216ENST00000641375 C6orf141Q5SZD1 244 aa15.3■□□□□ 0.04
PHGDH-216ENST00000641375 PARP8Q8N3A8 854 aa15.3■□□□□ 0.04
PHGDH-216ENST00000641375 LINC00471Q8N535 108 aa15.3■□□□□ 0.04
PHGDH-216ENST00000641375 EID2Q8N6I1 236 aa15.3■□□□□ 0.04
PHGDH-216ENST00000641375 OR4D9Q8NGE8 314 aa15.3■□□□□ 0.04
PHGDH-216ENST00000641375 FBLIM1Q8WUP2 373 aa15.3■□□□□ 0.04
PHGDH-216ENST00000641375 PIK3R3Q92569 461 aa15.3■□□□□ 0.04
PHGDH-216ENST00000641375 HRASLS5Q96KN8 279 aa15.3■□□□□ 0.04
PHGDH-216ENST00000641375 NIPSNAP1Q9BPW8 284 aa15.3■□□□□ 0.04
PHGDH-216ENST00000641375 LMF2Q9BU23 707 aaKnown RBP15.3■□□□□ 0.04
PHGDH-216ENST00000641375 DHCR7Q9UBM7 475 aaKnown RBP15.3■□□□□ 0.04
PHGDH-216ENST00000641375 ZNF443Q9Y2A4 671 aaPredicted RBP15.3■□□□□ 0.04
PHGDH-216ENST00000641375 TRBV4-1A0A0J9YWV2 114 aa15.29■□□□□ 0.04
PHGDH-216ENST00000641375 AGAP5A6NIR3 686 aa15.29■□□□□ 0.04
PHGDH-216ENST00000641375 ARHGAP33O14559 1287 aa15.29■□□□□ 0.04
PHGDH-216ENST00000641375 CBLP22681 906 aa15.29■□□□□ 0.04
PHGDH-216ENST00000641375 OR1D4P47884 311 aa15.29■□□□□ 0.04
PHGDH-216ENST00000641375 HLCSP50747 726 aa15.29■□□□□ 0.04
PHGDH-216ENST00000641375 RPP38P78345 283 aaKnown RBP15.29■□□□□ 0.04
PHGDH-216ENST00000641375 GPR68Q15743 365 aa15.29■□□□□ 0.04
PHGDH-216ENST00000641375 MEP1AQ16819 746 aa15.29■□□□□ 0.04
PHGDH-216ENST00000641375 ZNF770Q6IQ21 691 aaPredicted RBP15.29■□□□□ 0.04
PHGDH-216ENST00000641375 SATL1Q86VE3 508 aa15.29■□□□□ 0.04
PHGDH-216ENST00000641375 AQP11Q8NBQ7 271 aa15.29■□□□□ 0.04
PHGDH-216ENST00000641375 ADAMTS16Q8TE57 1224 aa15.29■□□□□ 0.04
PHGDH-216ENST00000641375 ZNF304Q9HCX3 659 aa15.29■□□□□ 0.04
PHGDH-216ENST00000641375 LANCL2Q9NS86 450 aa15.29■□□□□ 0.04
PHGDH-216ENST00000641375 MGAT4BQ9UQ53 548 aa15.29■□□□□ 0.04
PHGDH-216ENST00000641375 HEMK1Q9Y5R4 338 aaPredicted RBP15.29■□□□□ 0.04
PHGDH-216ENST00000641375 A0A1B0GX78 115 aa15.29■□□□□ 0.04
PHGDH-216ENST00000641375 PATE3B3GLJ2 98 aa15.29■□□□□ 0.04
PHGDH-216ENST00000641375 E9PQ18 207 aa15.29■□□□□ 0.04
PHGDH-216ENST00000641375 KIAA0513O60268 411 aa15.29■□□□□ 0.04
PHGDH-216ENST00000641375 ADAP00813 363 aa15.29■□□□□ 0.04
PHGDH-216ENST00000641375 IFNA16P05015 189 aa15.29■□□□□ 0.04
PHGDH-216ENST00000641375 RPLP0P05388 317 aaKnown RBP15.29■□□□□ 0.04
PHGDH-216ENST00000641375 DBIP07108 87 aaKnown RBP15.29■□□□□ 0.04
PHGDH-216ENST00000641375 HNRNPCP07910 306 aaKnown RBP eCLIP15.29■□□□□ 0.04
PHGDH-216ENST00000641375 CRHBPP24387 322 aa15.29■□□□□ 0.04
PHGDH-216ENST00000641375 CD97P48960 835 aa15.29■□□□□ 0.04
PHGDH-216ENST00000641375 EMDP50402 254 aa15.29■□□□□ 0.04
PHGDH-216ENST00000641375 CDH15P55291 814 aa15.29■□□□□ 0.04
PHGDH-216ENST00000641375 NUP107P57740 925 aa15.29■□□□□ 0.04
PHGDH-216ENST00000641375 ACY1Q03154 408 aa15.29■□□□□ 0.04
PHGDH-216ENST00000641375 ZNF267Q14586 743 aaPredicted RBP15.29■□□□□ 0.04
PHGDH-216ENST00000641375 CCNJQ5T5M9 372 aa15.29■□□□□ 0.04
PHGDH-216ENST00000641375 ZNF574Q6ZN55 896 aaPredicted RBP15.29■□□□□ 0.04
PHGDH-216ENST00000641375 PTCHD1Q96NR3 888 aa15.29■□□□□ 0.04
PHGDH-216ENST00000641375 LRRN3Q9H3W5 708 aa15.29■□□□□ 0.04
PHGDH-216ENST00000641375 FOLH1BQ9HBA9 442 aa15.29■□□□□ 0.04
PHGDH-216ENST00000641375 ATXN7L1Q9ULK2 861 aaPredicted RBP15.29■□□□□ 0.04
PHGDH-216ENST00000641375 SRPK3Q9UPE1 567 aa15.29■□□□□ 0.04
PHGDH-216ENST00000641375 BDP1A6H8Y1 2624 aa15.28■□□□□ 0.04
PHGDH-216ENST00000641375 A0A1W2PQM1 296 aa15.28■□□□□ 0.04
PHGDH-216ENST00000641375 BRINP1O60477 761 aa15.28■□□□□ 0.04
PHGDH-216ENST00000641375 GUSBP08236 651 aa15.28■□□□□ 0.04
PHGDH-216ENST00000641375 ZNF24P17028 368 aa15.28■□□□□ 0.04
PHGDH-216ENST00000641375 FUT4P22083 530 aa15.28■□□□□ 0.04
PHGDH-216ENST00000641375 FBLP22087 321 aaKnown RBP15.28■□□□□ 0.04
PHGDH-216ENST00000641375 RPS4Y1P22090 263 aaKnown RBP15.28■□□□□ 0.04
PHGDH-216ENST00000641375 EPHA2P29317 976 aa15.28■□□□□ 0.04
PHGDH-216ENST00000641375 PSMD7P51665 324 aa15.28■□□□□ 0.04
PHGDH-216ENST00000641375 CCL7P80098 99 aa15.28■□□□□ 0.04
PHGDH-216ENST00000641375 PSG6Q00889 435 aa15.28■□□□□ 0.04
PHGDH-216ENST00000641375 FUT7Q11130 342 aa15.28■□□□□ 0.04
PHGDH-216ENST00000641375 CTU2Q2VPK5 515 aaKnown RBP15.28■□□□□ 0.04
PHGDH-216ENST00000641375 NADK2Q4G0N4 442 aa15.28■□□□□ 0.04
PHGDH-216ENST00000641375 QSOX2Q6ZRP7 698 aa15.28■□□□□ 0.04
PHGDH-216ENST00000641375 SLC7A13Q8TCU3 470 aa15.28■□□□□ 0.04
PHGDH-216ENST00000641375 CNDP2Q96KP4 475 aaKnown RBP15.28■□□□□ 0.04
PHGDH-216ENST00000641375 ARMC7Q9H6L4 198 aa15.28■□□□□ 0.04
PHGDH-216ENST00000641375 NECTIN3Q9NQS3 549 aa15.28■□□□□ 0.04
PHGDH-216ENST00000641375 CHST2Q9Y4C5 530 aa15.28■□□□□ 0.04
PHGDH-216ENST00000641375 NUP210LQ5VU65 1888 aa15.28■□□□□ 0.04
PHGDH-216ENST00000641375 AP3D1O14617 1153 aa15.28■□□□□ 0.04
PHGDH-216ENST00000641375 OR10H3O60404 316 aa15.28■□□□□ 0.04
PHGDH-216ENST00000641375 GASTP01350 101 aa15.28■□□□□ 0.04
PHGDH-216ENST00000641375 CCNYL3P0C7X3 344 aa15.28■□□□□ 0.04
PHGDH-216ENST00000641375 EEF1B2P24534 225 aaKnown RBP15.28■□□□□ 0.04
PHGDH-216ENST00000641375 SSTR4P31391 388 aa15.28■□□□□ 0.04
PHGDH-216ENST00000641375 RGS8P57771 180 aaPredicted RBP15.28■□□□□ 0.04
PHGDH-216ENST00000641375 TAS2R41P59536 307 aa15.28■□□□□ 0.04
PHGDH-216ENST00000641375 GABARAPL2P60520 117 aa15.28■□□□□ 0.04
PHGDH-216ENST00000641375 ESRRGP62508 458 aa15.28■□□□□ 0.04
PHGDH-216ENST00000641375 CDK5R2Q13319 367 aa15.28■□□□□ 0.04
PHGDH-216ENST00000641375 NPTX1Q15818 432 aa15.28■□□□□ 0.04
PHGDH-216ENST00000641375 B3GNT6Q6ZMB0 384 aa15.28■□□□□ 0.04
PHGDH-216ENST00000641375 TMPRSS9Q7Z410 1059 aa15.28■□□□□ 0.04
PHGDH-216ENST00000641375 ZBTB44Q8NCP5 570 aa15.28■□□□□ 0.04
PHGDH-216ENST00000641375 ZNF566Q969W8 418 aa15.28■□□□□ 0.04
PHGDH-216ENST00000641375 VSTM2LQ96N03 204 aa15.28■□□□□ 0.04
PHGDH-216ENST00000641375 FUZQ9BT04 418 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms