RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 FTSJ1Q9UET6 329 aa9.05□□□□□ -0.96
PHGDH-215ENST00000641371 C19orf25Q9UFG5 118 aaPredicted RBP9.05□□□□□ -0.96
PHGDH-215ENST00000641371 TESQ9UGI8 421 aaKnown RBP9.05□□□□□ -0.96
PHGDH-215ENST00000641371 CLCA3PQ9Y6N3 262 aa9.05□□□□□ -0.96
PHGDH-215ENST00000641371 SMIM31A0A1B0GVY4 71 aa9.04□□□□□ -0.96
PHGDH-215ENST00000641371 HTR3EA5X5Y0 456 aa9.04□□□□□ -0.96
PHGDH-215ENST00000641371 TRIM64A6NGJ6 449 aa9.04□□□□□ -0.96
PHGDH-215ENST00000641371 C17orf105B2RV13 164 aa9.04□□□□□ -0.96
PHGDH-215ENST00000641371 B4E171 279 aa9.04□□□□□ -0.96
PHGDH-215ENST00000641371 CPNE3O75131 537 aaKnown RBP9.04□□□□□ -0.96
PHGDH-215ENST00000641371 SCRG1O75711 98 aa9.04□□□□□ -0.96
PHGDH-215ENST00000641371 DIRAS1O95057 198 aa9.04□□□□□ -0.96
PHGDH-215ENST00000641371 KCNK2O95069 426 aa9.04□□□□□ -0.96
PHGDH-215ENST00000641371 CTSBP07858 339 aa9.04□□□□□ -0.96
PHGDH-215ENST00000641371 CT62P0C5K7 136 aa9.04□□□□□ -0.96
PHGDH-215ENST00000641371 CCDC159P0C7I6 412 aa9.04□□□□□ -0.96
PHGDH-215ENST00000641371 CDK4P11802 303 aa9.04□□□□□ -0.96
PHGDH-215ENST00000641371 CCKBRP32239 447 aa9.04□□□□□ -0.96
PHGDH-215ENST00000641371 TSPAN7P41732 249 aa9.04□□□□□ -0.96
PHGDH-215ENST00000641371 PPICP45877 212 aa9.04□□□□□ -0.96
PHGDH-215ENST00000641371 RPL5P46777 297 aaKnown RBP9.04□□□□□ -0.96
PHGDH-215ENST00000641371 EMDP50402 254 aa9.04□□□□□ -0.96
PHGDH-215ENST00000641371 PDX1P52945 283 aa9.04□□□□□ -0.96
PHGDH-215ENST00000641371 NR1H2P55055 460 aa9.04□□□□□ -0.96
PHGDH-215ENST00000641371 SH3BGRP55822 239 aaPredicted RBP9.04□□□□□ -0.96
PHGDH-215ENST00000641371 RAB15P59190 212 aa9.04□□□□□ -0.96
PHGDH-215ENST00000641371 TAS2R41P59536 307 aa9.04□□□□□ -0.96
PHGDH-215ENST00000641371 SNRPNP63162 240 aaKnown RBP9.04□□□□□ -0.96
PHGDH-215ENST00000641371 DCDP81605 110 aaKnown RBP9.04□□□□□ -0.96
PHGDH-215ENST00000641371 MYBPC1Q00872 1141 aa9.04□□□□□ -0.96
PHGDH-215ENST00000641371 RHAGQ02094 409 aa9.04□□□□□ -0.96
PHGDH-215ENST00000641371 ALDH6A1Q02252 535 aaKnown RBP9.04□□□□□ -0.96
PHGDH-215ENST00000641371 ZFP36L1Q07352 338 aaKnown RBP9.04□□□□□ -0.96
PHGDH-215ENST00000641371 NPRL3Q12980 569 aa9.04□□□□□ -0.96
PHGDH-215ENST00000641371 ZNF267Q14586 743 aaPredicted RBP9.04□□□□□ -0.96
PHGDH-215ENST00000641371 DECR1Q16698 335 aa9.04□□□□□ -0.96
PHGDH-215ENST00000641371 EXOC3L2Q2M3D2 409 aa9.04□□□□□ -0.96
PHGDH-215ENST00000641371 MINDY4Q4G0A6 757 aa9.04□□□□□ -0.96
PHGDH-215ENST00000641371 FLYWCH1Q4VC44 716 aa9.04□□□□□ -0.96
PHGDH-215ENST00000641371 FGD3Q5JSP0 725 aa9.04□□□□□ -0.96
PHGDH-215ENST00000641371 CD300LDQ6UXZ3 194 aa9.04□□□□□ -0.96
PHGDH-215ENST00000641371 DEF8Q6ZN54 512 aa9.04□□□□□ -0.96
PHGDH-215ENST00000641371 ZNF574Q6ZN55 896 aaPredicted RBP9.04□□□□□ -0.96
PHGDH-215ENST00000641371 RRM2BQ7LG56 351 aa9.04□□□□□ -0.96
PHGDH-215ENST00000641371 ZNF550Q7Z398 422 aa9.04□□□□□ -0.96
PHGDH-215ENST00000641371 TSEN54Q7Z6J9 526 aaKnown RBP9.04□□□□□ -0.96
PHGDH-215ENST00000641371 TMEM179BQ7Z7N9 219 aa9.04□□□□□ -0.96
PHGDH-215ENST00000641371 ZNF786Q8N393 782 aa9.04□□□□□ -0.96
PHGDH-215ENST00000641371 ZNF527Q8NB42 609 aa9.04□□□□□ -0.96
PHGDH-215ENST00000641371 TSPAN14Q8NG11 270 aa9.04□□□□□ -0.96
PHGDH-215ENST00000641371 ZNF566Q969W8 418 aa9.04□□□□□ -0.96
PHGDH-215ENST00000641371 HRASLS5Q96KN8 279 aa9.04□□□□□ -0.96
PHGDH-215ENST00000641371 OR6C1Q96RD1 312 aa9.04□□□□□ -0.96
PHGDH-215ENST00000641371 CCNL2Q96S94 520 aaPredicted RBP9.04□□□□□ -0.96
PHGDH-215ENST00000641371 MBOAT4Q96T53 435 aa9.04□□□□□ -0.96
PHGDH-215ENST00000641371 CDC6Q99741 560 aa9.04□□□□□ -0.96
PHGDH-215ENST00000641371 PRRX2Q99811 253 aa9.04□□□□□ -0.96
PHGDH-215ENST00000641371 ZPBPQ9BS86 351 aa9.04□□□□□ -0.96
PHGDH-215ENST00000641371 CNPPD1Q9BV87 410 aa9.04□□□□□ -0.96
PHGDH-215ENST00000641371 PRRG3Q9BZD7 231 aa9.04□□□□□ -0.96
PHGDH-215ENST00000641371 SLC26A1Q9H2B4 701 aa9.04□□□□□ -0.96
PHGDH-215ENST00000641371 SYNDIG1Q9H7V2 258 aa9.04□□□□□ -0.96
PHGDH-215ENST00000641371 CCNB1IP1Q9NPC3 277 aa9.04□□□□□ -0.96
PHGDH-215ENST00000641371 FBXO8Q9NRD0 319 aa9.04□□□□□ -0.96
PHGDH-215ENST00000641371 ATXN7L1Q9ULK2 861 aaPredicted RBP9.04□□□□□ -0.96
PHGDH-215ENST00000641371 NDRG4Q9ULP0 352 aaKnown RBP9.04□□□□□ -0.96
PHGDH-215ENST00000641371 SLC35A3Q9Y2D2 325 aa9.04□□□□□ -0.96
PHGDH-215ENST00000641371 CLDN16Q9Y5I7 305 aa9.04□□□□□ -0.96
PHGDH-215ENST00000641371 GMPPBQ9Y5P6 360 aa9.04□□□□□ -0.96
PHGDH-215ENST00000641371 AK5Q9Y6K8 562 aa9.04□□□□□ -0.96
PHGDH-215ENST00000641371 KMT2EQ8IZD2 1858 aa9.04□□□□□ -0.96
PHGDH-215ENST00000641371 TTC28Q96AY4 2481 aa9.03□□□□□ -0.96
PHGDH-215ENST00000641371 FRG2CA6NGY1 282 aa9.03□□□□□ -0.96
PHGDH-215ENST00000641371 A6NHS1 94 aa9.03□□□□□ -0.96
PHGDH-215ENST00000641371 LRP3O75074 770 aa9.03□□□□□ -0.96
PHGDH-215ENST00000641371 SMNDC1O75940 238 aaKnown RBP eCLIP9.03□□□□□ -0.96
PHGDH-215ENST00000641371 RECKO95980 971 aa9.03□□□□□ -0.96
PHGDH-215ENST00000641371 MAOAP21397 527 aa9.03□□□□□ -0.96
PHGDH-215ENST00000641371 DRD5P21918 477 aa9.03□□□□□ -0.96
PHGDH-215ENST00000641371 CBLP22681 906 aa9.03□□□□□ -0.96
PHGDH-215ENST00000641371 ELAVL4P26378 380 aaKnown RBP9.03□□□□□ -0.96
PHGDH-215ENST00000641371 SOX18P35713 384 aa9.03□□□□□ -0.96
PHGDH-215ENST00000641371 PIGAP37287 484 aa9.03□□□□□ -0.96
PHGDH-215ENST00000641371 OR1D4P47884 311 aa9.03□□□□□ -0.96
PHGDH-215ENST00000641371 HLCSP50747 726 aa9.03□□□□□ -0.96
PHGDH-215ENST00000641371 ATP12AP54707 1039 aa9.03□□□□□ -0.96
PHGDH-215ENST00000641371 EEF1A1P68104 462 aaKnown RBP9.03□□□□□ -0.96
PHGDH-215ENST00000641371 PSG6Q00889 435 aa9.03□□□□□ -0.96
PHGDH-215ENST00000641371 APOFQ13790 326 aa9.03□□□□□ -0.96
PHGDH-215ENST00000641371 EXOSC7Q15024 291 aaKnown RBP9.03□□□□□ -0.96
PHGDH-215ENST00000641371 GPR68Q15743 365 aa9.03□□□□□ -0.96
PHGDH-215ENST00000641371 ZNF141Q15928 474 aa9.03□□□□□ -0.96
PHGDH-215ENST00000641371 ZIK1Q3SY52 487 aaPredicted RBP9.03□□□□□ -0.96
PHGDH-215ENST00000641371 NKAIN1Q4KMZ8 207 aa9.03□□□□□ -0.96
PHGDH-215ENST00000641371 PHF19Q5T6S3 580 aa9.03□□□□□ -0.96
PHGDH-215ENST00000641371 MFSD4BQ5TF39 518 aa9.03□□□□□ -0.96
PHGDH-215ENST00000641371 HLA-DQA1Q5Y7H0 255 aa9.03□□□□□ -0.96
PHGDH-215ENST00000641371 SLC29A4Q7RTT9 530 aa9.03□□□□□ -0.96
PHGDH-215ENST00000641371 OVCH1Q7RTY7 1134 aa9.03□□□□□ -0.96
PHGDH-215ENST00000641371 TMEM151BQ8IW70 566 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms