RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 CAPN10Q9HC96 672 aa16.08■□□□□ 0.16
PHGDH-208ENST00000641023 GPR55Q9Y2T6 319 aaPredicted RBP16.08■□□□□ 0.16
PHGDH-208ENST00000641023 UNC13CQ8NB66 2214 aa16.08■□□□□ 0.16
PHGDH-208ENST00000641023 H3BSA7 217 aa16.07■□□□□ 0.16
PHGDH-208ENST00000641023 PRAMEF2O60811 474 aa16.07■□□□□ 0.16
PHGDH-208ENST00000641023 GALNSP34059 522 aa16.07■□□□□ 0.16
PHGDH-208ENST00000641023 IDH2P48735 452 aaKnown RBP16.07■□□□□ 0.16
PHGDH-208ENST00000641023 EMDP50402 254 aa16.07■□□□□ 0.16
PHGDH-208ENST00000641023 CRISP1P54107 249 aa16.07■□□□□ 0.16
PHGDH-208ENST00000641023 PSG6Q00889 435 aa16.07■□□□□ 0.16
PHGDH-208ENST00000641023 TARDBPQ13148 414 aaKnown RBP eCLIP16.07■□□□□ 0.16
PHGDH-208ENST00000641023 SQSTM1Q13501 440 aa16.07■□□□□ 0.16
PHGDH-208ENST00000641023 ZNF267Q14586 743 aaPredicted RBP16.07■□□□□ 0.16
PHGDH-208ENST00000641023 PTGES3Q15185 160 aaKnown RBP16.07■□□□□ 0.16
PHGDH-208ENST00000641023 PEAR1Q5VY43 1037 aaPredicted RBP16.07■□□□□ 0.16
PHGDH-208ENST00000641023 PODNL1Q6PEZ8 512 aa16.07■□□□□ 0.16
PHGDH-208ENST00000641023 ZNF836Q6ZNA1 936 aa16.07■□□□□ 0.16
PHGDH-208ENST00000641023 DGCR6LQ9BY27 220 aa16.07■□□□□ 0.16
PHGDH-208ENST00000641023 ARMC7Q9H6L4 198 aa16.07■□□□□ 0.16
PHGDH-208ENST00000641023 FOLH1BQ9HBA9 442 aa16.07■□□□□ 0.16
PHGDH-208ENST00000641023 CTPS2Q9NRF8 586 aa16.07■□□□□ 0.16
PHGDH-208ENST00000641023 FGF21Q9NSA1 209 aa16.07■□□□□ 0.16
PHGDH-208ENST00000641023 DHCR7Q9UBM7 475 aaKnown RBP16.07■□□□□ 0.16
PHGDH-208ENST00000641023 HEMK1Q9Y5R4 338 aaPredicted RBP16.07■□□□□ 0.16
PHGDH-208ENST00000641023 SNX5Q9Y5X3 404 aa16.07■□□□□ 0.16
PHGDH-208ENST00000641023 CEPT1Q9Y6K0 416 aa16.07■□□□□ 0.16
PHGDH-208ENST00000641023 OR2W5A6NFC9 320 aa16.07■□□□□ 0.16
PHGDH-208ENST00000641023 FRS3O43559 492 aa16.07■□□□□ 0.16
PHGDH-208ENST00000641023 SIGLEC6O43699 453 aa16.07■□□□□ 0.16
PHGDH-208ENST00000641023 XPNPEP2O43895 674 aa16.07■□□□□ 0.16
PHGDH-208ENST00000641023 KIAA0513O60268 411 aa16.07■□□□□ 0.16
PHGDH-208ENST00000641023 BRINP1O60477 761 aa16.07■□□□□ 0.16
PHGDH-208ENST00000641023 CYP7B1O75881 506 aa16.07■□□□□ 0.16
PHGDH-208ENST00000641023 OSMP13725 252 aa16.07■□□□□ 0.16
PHGDH-208ENST00000641023 TNNI3P19429 210 aa16.07■□□□□ 0.16
PHGDH-208ENST00000641023 FMO3P31513 532 aa16.07■□□□□ 0.16
PHGDH-208ENST00000641023 HOXD12P35452 270 aa16.07■□□□□ 0.16
PHGDH-208ENST00000641023 OR1D4P47884 311 aa16.07■□□□□ 0.16
PHGDH-208ENST00000641023 GSSP48637 474 aa16.07■□□□□ 0.16
PHGDH-208ENST00000641023 YOD1Q5VVQ6 348 aaPredicted RBP16.07■□□□□ 0.16
PHGDH-208ENST00000641023 PGBD2Q6P3X8 592 aa16.07■□□□□ 0.16
PHGDH-208ENST00000641023 FIGNL1Q6PIW4 674 aa16.07■□□□□ 0.16
PHGDH-208ENST00000641023 MED25Q71SY5 747 aa16.07■□□□□ 0.16
PHGDH-208ENST00000641023 RABEPKQ7Z6M1 372 aa16.07■□□□□ 0.16
PHGDH-208ENST00000641023 SPARTQ8N0X7 666 aa16.07■□□□□ 0.16
PHGDH-208ENST00000641023 FAM181AQ8N9Y4 354 aa16.07■□□□□ 0.16
PHGDH-208ENST00000641023 C7orf57Q8NEG2 295 aa16.07■□□□□ 0.16
PHGDH-208ENST00000641023 PTCHD1Q96NR3 888 aa16.07■□□□□ 0.16
PHGDH-208ENST00000641023 NODALQ96S42 347 aa16.07■□□□□ 0.16
PHGDH-208ENST00000641023 TUBA1CQ9BQE3 449 aa16.07■□□□□ 0.16
PHGDH-208ENST00000641023 CNPPD1Q9BV87 410 aa16.07■□□□□ 0.16
PHGDH-208ENST00000641023 ANKRD19PQ9H560 264 aa16.07■□□□□ 0.16
PHGDH-208ENST00000641023 FSCN3Q9NQT6 498 aa16.07■□□□□ 0.16
PHGDH-208ENST00000641023 MAN2C1Q9NTJ4 1040 aa16.07■□□□□ 0.16
PHGDH-208ENST00000641023 MMACHCQ9Y4U1 282 aa16.07■□□□□ 0.16
PHGDH-208ENST00000641023 PI4KAP42356 2102 aa16.07■□□□□ 0.16
PHGDH-208ENST00000641023 ASXL3Q9C0F0 2248 aa16.06■□□□□ 0.16
PHGDH-208ENST00000641023 KCNK2O95069 426 aa16.06■□□□□ 0.16
PHGDH-208ENST00000641023 CPNE6O95741 557 aa16.06■□□□□ 0.16
PHGDH-208ENST00000641023 RPS4Y1P22090 263 aaKnown RBP16.06■□□□□ 0.16
PHGDH-208ENST00000641023 CHMP24386 653 aa16.06■□□□□ 0.16
PHGDH-208ENST00000641023 SSTR4P31391 388 aa16.06■□□□□ 0.16
PHGDH-208ENST00000641023 CDC42P60953 191 aa16.06■□□□□ 0.16
PHGDH-208ENST00000641023 EEF1A1P68104 462 aaKnown RBP16.06■□□□□ 0.16
PHGDH-208ENST00000641023 COX10Q12887 443 aa16.06■□□□□ 0.16
PHGDH-208ENST00000641023 ILKQ13418 452 aa16.06■□□□□ 0.16
PHGDH-208ENST00000641023 TRAM2Q15035 370 aa16.06■□□□□ 0.16
PHGDH-208ENST00000641023 NEDD8Q15843 81 aa16.06■□□□□ 0.16
PHGDH-208ENST00000641023 AP1ARQ63HQ0 302 aa16.06■□□□□ 0.16
PHGDH-208ENST00000641023 GUSBP11Q6P575 273 aa16.06■□□□□ 0.16
PHGDH-208ENST00000641023 OR4K5Q8NGD3 323 aa16.06■□□□□ 0.16
PHGDH-208ENST00000641023 CEP76Q8TAP6 659 aa16.06■□□□□ 0.16
PHGDH-208ENST00000641023 UBE2FQ969M7 185 aa16.06■□□□□ 0.16
PHGDH-208ENST00000641023 VSTM2LQ96N03 204 aa16.06■□□□□ 0.16
PHGDH-208ENST00000641023 IMPAD1Q9NX62 359 aa16.06■□□□□ 0.16
PHGDH-208ENST00000641023 AASSQ9UDR5 926 aa16.06■□□□□ 0.16
PHGDH-208ENST00000641023 RNF6Q9Y252 685 aa16.06■□□□□ 0.16
PHGDH-208ENST00000641023 GXYLT2A0PJZ3 443 aa16.06■□□□□ 0.16
PHGDH-208ENST00000641023 CPSF4LA6NMK7 179 aaKnown RBP16.06■□□□□ 0.16
PHGDH-208ENST00000641023 NID1P14543 1247 aa16.06■□□□□ 0.16
PHGDH-208ENST00000641023 GSTT1P30711 240 aa16.06■□□□□ 0.16
PHGDH-208ENST00000641023 IFNGR2P38484 337 aa16.06■□□□□ 0.16
PHGDH-208ENST00000641023 GCGRP47871 477 aa16.06■□□□□ 0.16
PHGDH-208ENST00000641023 PGDP52209 483 aa16.06■□□□□ 0.16
PHGDH-208ENST00000641023 FUT7Q11130 342 aa16.06■□□□□ 0.16
PHGDH-208ENST00000641023 PMS2P3Q13401 168 aa16.06■□□□□ 0.16
PHGDH-208ENST00000641023 DSG2Q14126 1118 aa16.06■□□□□ 0.16
PHGDH-208ENST00000641023 ENTPD8Q5MY95 495 aa16.06■□□□□ 0.16
PHGDH-208ENST00000641023 RRM2BQ7LG56 351 aa16.06■□□□□ 0.16
PHGDH-208ENST00000641023 ZNF540Q8NDQ6 660 aa16.06■□□□□ 0.16
PHGDH-208ENST00000641023 ZNF501Q96CX3 271 aaPredicted RBP16.06■□□□□ 0.16
PHGDH-208ENST00000641023 CNDP2Q96KP4 475 aaKnown RBP16.06■□□□□ 0.16
PHGDH-208ENST00000641023 MCHR1Q99705 422 aa16.06■□□□□ 0.16
PHGDH-208ENST00000641023 POLR2J3Q9H1A7 115 aaKnown RBP16.06■□□□□ 0.16
PHGDH-208ENST00000641023 ZNF304Q9HCX3 659 aa16.06■□□□□ 0.16
PHGDH-208ENST00000641023 CCNB1IP1Q9NPC3 277 aa16.06■□□□□ 0.16
PHGDH-208ENST00000641023 NECTIN3Q9NQS3 549 aa16.06■□□□□ 0.16
PHGDH-208ENST00000641023 LANCL2Q9NS86 450 aa16.06■□□□□ 0.16
PHGDH-208ENST00000641023 FBXO34Q9NWN3 711 aa16.06■□□□□ 0.16
PHGDH-208ENST00000641023 RSL24D1Q9UHA3 163 aaKnown RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms