RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 REEP3Q6NUK4 255 aa12.93□□□□□ -0.34
SCARB2-227ENST00000640957 MZT2AQ6P582 158 aa12.93□□□□□ -0.34
SCARB2-227ENST00000640957 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.93□□□□□ -0.34
SCARB2-227ENST00000640957 TTLQ8NG68 377 aa12.93□□□□□ -0.34
SCARB2-227ENST00000640957 OR52B4Q8NGK2 314 aa12.93□□□□□ -0.34
SCARB2-227ENST00000640957 OR6T1Q8NGN1 323 aa12.93□□□□□ -0.34
SCARB2-227ENST00000640957 TRMT10AQ8TBZ6 339 aaKnown RBP12.93□□□□□ -0.34
SCARB2-227ENST00000640957 THAP4Q8WY91 577 aa12.93□□□□□ -0.34
SCARB2-227ENST00000640957 IL17FQ96PD4 163 aa12.93□□□□□ -0.34
SCARB2-227ENST00000640957 SLC12A9Q9BXP2 914 aa12.93□□□□□ -0.34
SCARB2-227ENST00000640957 REEP4Q9H6H4 257 aa12.93□□□□□ -0.34
SCARB2-227ENST00000640957 RETREG1Q9H6L5 497 aa12.93□□□□□ -0.34
SCARB2-227ENST00000640957 FNIP2Q9P278 1114 aa12.93□□□□□ -0.34
SCARB2-227ENST00000640957 SLC9B1P1A6NJY1 282 aa12.93□□□□□ -0.34
SCARB2-227ENST00000640957 H0YC42 278 aa12.93□□□□□ -0.34
SCARB2-227ENST00000640957 H7C0S8 307 aa12.93□□□□□ -0.34
SCARB2-227ENST00000640957 TFP02787 698 aa12.93□□□□□ -0.34
SCARB2-227ENST00000640957 INHAP05111 366 aa12.93□□□□□ -0.34
SCARB2-227ENST00000640957 CXCL2P19875 107 aa12.93□□□□□ -0.34
SCARB2-227ENST00000640957 AHCYP23526 432 aa12.93□□□□□ -0.34
SCARB2-227ENST00000640957 SLC6A12P48065 614 aa12.93□□□□□ -0.34
SCARB2-227ENST00000640957 SLBPQ14493 270 aaKnown RBP eCLIP12.93□□□□□ -0.34
SCARB2-227ENST00000640957 C18orf63Q68DL7 685 aa12.93□□□□□ -0.34
SCARB2-227ENST00000640957 OR5M10Q6IEU7 315 aa12.93□□□□□ -0.34
SCARB2-227ENST00000640957 MACROD1Q9BQ69 325 aa12.93□□□□□ -0.34
SCARB2-227ENST00000640957 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.93□□□□□ -0.34
SCARB2-227ENST00000640957 TMEM168Q9H0V1 697 aa12.93□□□□□ -0.34
SCARB2-227ENST00000640957 FZD3Q9NPG1 666 aa12.93□□□□□ -0.34
SCARB2-227ENST00000640957 EQTNQ9NQ60 294 aa12.93□□□□□ -0.34
SCARB2-227ENST00000640957 TAS2R7Q9NYW3 318 aa12.93□□□□□ -0.34
SCARB2-227ENST00000640957 ZNF69Q9UC07 566 aa12.93□□□□□ -0.34
SCARB2-227ENST00000640957 GPR160Q9UJ42 338 aa12.93□□□□□ -0.34
SCARB2-227ENST00000640957 IRAK3Q9Y616 596 aa12.93□□□□□ -0.34
SCARB2-227ENST00000640957 FXYD6-FXYD2A0A087WZ82 144 aa12.92□□□□□ -0.34
SCARB2-227ENST00000640957 OR6C74A6NCV1 312 aa12.92□□□□□ -0.34
SCARB2-227ENST00000640957 L7N2F9 121 aa12.92□□□□□ -0.34
SCARB2-227ENST00000640957 PDCD5O14737 125 aa12.92□□□□□ -0.34
SCARB2-227ENST00000640957 ADRB1P08588 477 aa12.92□□□□□ -0.34
SCARB2-227ENST00000640957 HOXB6P17509 224 aaKnown RBP12.92□□□□□ -0.34
SCARB2-227ENST00000640957 GABRR2P28476 465 aa12.92□□□□□ -0.34
SCARB2-227ENST00000640957 PITPNBP48739 271 aa12.92□□□□□ -0.34
SCARB2-227ENST00000640957 HCCSP53701 268 aa12.92□□□□□ -0.34
SCARB2-227ENST00000640957 CLDN12P56749 244 aa12.92□□□□□ -0.34
SCARB2-227ENST00000640957 RIN1Q13671 783 aa12.92□□□□□ -0.34
SCARB2-227ENST00000640957 SHEQ5VZ18 495 aa12.92□□□□□ -0.34
SCARB2-227ENST00000640957 C12orf73Q69YU5 71 aa12.92□□□□□ -0.34
SCARB2-227ENST00000640957 RETSATQ6NUM9 610 aa12.92□□□□□ -0.34
SCARB2-227ENST00000640957 CRTC1Q6UUV9 634 aa12.92□□□□□ -0.34
SCARB2-227ENST00000640957 LINC00518Q8N0U6 118 aa12.92□□□□□ -0.34
SCARB2-227ENST00000640957 ZG16BQ96DA0 208 aa12.92□□□□□ -0.34
SCARB2-227ENST00000640957 ZC3HAV1LQ96H79 300 aaKnown RBP12.92□□□□□ -0.34
SCARB2-227ENST00000640957 ZSWIM3Q96MP5 696 aa12.92□□□□□ -0.34
SCARB2-227ENST00000640957 USB1Q9BQ65 265 aaKnown RBP12.92□□□□□ -0.34
SCARB2-227ENST00000640957 FXYD6Q9H0Q3 95 aa12.92□□□□□ -0.34
SCARB2-227ENST00000640957 TESQ9UGI8 421 aaKnown RBP12.92□□□□□ -0.34
SCARB2-227ENST00000640957 ALPK3Q96L96 1907 aa12.92□□□□□ -0.34
SCARB2-227ENST00000640957 ANXA2P2A6NMY6 339 aa12.92□□□□□ -0.34
SCARB2-227ENST00000640957 PPM1DO15297 605 aa12.92□□□□□ -0.34
SCARB2-227ENST00000640957 CHST10O43529 356 aa12.92□□□□□ -0.34
SCARB2-227ENST00000640957 C3P1Q6ZMU1 363 aa12.92□□□□□ -0.34
SCARB2-227ENST00000640957 DNAJB7Q7Z6W7 309 aaPredicted RBP12.92□□□□□ -0.34
SCARB2-227ENST00000640957 UBTD2Q8WUN7 234 aa12.92□□□□□ -0.34
SCARB2-227ENST00000640957 CNOT9Q92600 299 aaKnown RBP12.92□□□□□ -0.34
SCARB2-227ENST00000640957 SCMH1Q96GD3 660 aa12.92□□□□□ -0.34
SCARB2-227ENST00000640957 HHIPQ96QV1 700 aa12.92□□□□□ -0.34
SCARB2-227ENST00000640957 ZSCAN32Q9NX65 697 aa12.92□□□□□ -0.34
SCARB2-227ENST00000640957 MGAT4CQ9UBM8 478 aa12.92□□□□□ -0.34
SCARB2-227ENST00000640957 ZNF593O00488 134 aaPredicted RBP12.91□□□□□ -0.34
SCARB2-227ENST00000640957 KHNYNO15037 678 aaKnown RBP12.91□□□□□ -0.34
SCARB2-227ENST00000640957 IFNA14P01570 189 aa12.91□□□□□ -0.34
SCARB2-227ENST00000640957 GYPBP06028 91 aa12.91□□□□□ -0.34
SCARB2-227ENST00000640957 OR56A5P0C7T3 313 aa12.91□□□□□ -0.34
SCARB2-227ENST00000640957 IRS1P35568 1242 aa12.91□□□□□ -0.34
SCARB2-227ENST00000640957 ERVK-25P63136 954 aa12.91□□□□□ -0.34
SCARB2-227ENST00000640957 SNTB2Q13425 540 aaKnown RBP12.91□□□□□ -0.34
SCARB2-227ENST00000640957 MACC1Q6ZN28 852 aa12.91□□□□□ -0.34
SCARB2-227ENST00000640957 PRICKLE2Q7Z3G6 844 aa12.91□□□□□ -0.34
SCARB2-227ENST00000640957 DDX53Q86TM3 631 aaKnown RBP12.91□□□□□ -0.34
SCARB2-227ENST00000640957 CMTM8Q8IZV2 173 aa12.91□□□□□ -0.34
SCARB2-227ENST00000640957 OR10H4Q8NGA5 316 aa12.91□□□□□ -0.34
SCARB2-227ENST00000640957 C16orf78Q8WTQ4 265 aa12.91□□□□□ -0.34
SCARB2-227ENST00000640957 KCTD12Q96CX2 325 aaKnown RBP12.91□□□□□ -0.34
SCARB2-227ENST00000640957 SOSTQ9BQB4 213 aa12.91□□□□□ -0.34
SCARB2-227ENST00000640957 ARHGAP9Q9BRR9 750 aa12.91□□□□□ -0.34
SCARB2-227ENST00000640957 OR51V1Q9H2C8 321 aa12.91□□□□□ -0.34
SCARB2-227ENST00000640957 ZCCHC4Q9H5U6 513 aa12.91□□□□□ -0.34
SCARB2-227ENST00000640957 MARCH5Q9NX47 278 aa12.91□□□□□ -0.34
SCARB2-227ENST00000640957 MGAT4BQ9UQ53 548 aa12.91□□□□□ -0.34
SCARB2-227ENST00000640957 ANKRD61A6NGH8 418 aa12.91□□□□□ -0.34
SCARB2-227ENST00000640957 FZD7O75084 574 aa12.91□□□□□ -0.34
SCARB2-227ENST00000640957 TRIM3O75382 744 aaPredicted RBP12.91□□□□□ -0.34
SCARB2-227ENST00000640957 HLA-DPB1P04440 258 aa12.91□□□□□ -0.34
SCARB2-227ENST00000640957 SRPRAP08240 638 aaKnown RBP12.91□□□□□ -0.34
SCARB2-227ENST00000640957 NR2F1P10589 423 aa12.91□□□□□ -0.34
SCARB2-227ENST00000640957 ANXA7P20073 488 aaKnown RBP12.91□□□□□ -0.34
SCARB2-227ENST00000640957 HMGA2P52926 109 aa12.91□□□□□ -0.34
SCARB2-227ENST00000640957 E2F1Q01094 437 aa12.91□□□□□ -0.34
SCARB2-227ENST00000640957 ZNF763Q0D2J5 394 aa12.91□□□□□ -0.34
SCARB2-227ENST00000640957 ZNF750Q32MQ0 723 aa12.91□□□□□ -0.34
SCARB2-227ENST00000640957 ARHGAP15Q53QZ3 475 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms