RNA–Protein interactions for RNA: ENST00000638237.1

NECAP1-210, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene NECAP1, Length 2,517 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-210ENST00000638237 SEMA3GQ9NS98 782 aa8.14□□□□□ -1.11
NECAP1-210ENST00000638237 MCUBQ9NWR8 336 aa8.14□□□□□ -1.11
NECAP1-210ENST00000638237 THAP10Q9P2Z0 257 aaPredicted RBP8.14□□□□□ -1.11
NECAP1-210ENST00000638237 HSPB11Q9Y547 144 aa8.14□□□□□ -1.11
NECAP1-210ENST00000638237 STON1Q9Y6Q2 735 aa8.14□□□□□ -1.11
NECAP1-210ENST00000638237 CACNA1IQ9P0X4 2223 aa8.14□□□□□ -1.11
NECAP1-210ENST00000638237 COL6A3P12111 3177 aa8.14□□□□□ -1.11
NECAP1-210ENST00000638237 LOC105371267A0A1B0GV96 52 aa8.13□□□□□ -1.11
NECAP1-210ENST00000638237 A0A1W2PQ72 361 aa8.13□□□□□ -1.11
NECAP1-210ENST00000638237 A0A1W2PRQ8 180 aa8.13□□□□□ -1.11
NECAP1-210ENST00000638237 EPOPA6NHQ4 379 aa8.13□□□□□ -1.11
NECAP1-210ENST00000638237 SGK494L7N484 410 aa8.13□□□□□ -1.11
NECAP1-210ENST00000638237 AGRPO00253 132 aa8.13□□□□□ -1.11
NECAP1-210ENST00000638237 GAAP10253 952 aa8.13□□□□□ -1.11
NECAP1-210ENST00000638237 ACP2P11117 423 aa8.13□□□□□ -1.11
NECAP1-210ENST00000638237 DDCP20711 480 aa8.13□□□□□ -1.11
NECAP1-210ENST00000638237 KCNJ5P48544 419 aa8.13□□□□□ -1.11
NECAP1-210ENST00000638237 CAV3P56539 151 aa8.13□□□□□ -1.11
NECAP1-210ENST00000638237 SNRPD2P62316 118 aaKnown RBP8.13□□□□□ -1.11
NECAP1-210ENST00000638237 FABP5Q01469 135 aa8.13□□□□□ -1.11
NECAP1-210ENST00000638237 MADCAM1Q13477 382 aa8.13□□□□□ -1.11
NECAP1-210ENST00000638237 GINS1Q14691 196 aa8.13□□□□□ -1.11
NECAP1-210ENST00000638237 P2RY14Q15391 338 aa8.13□□□□□ -1.11
NECAP1-210ENST00000638237 SF3A2Q15428 464 aaKnown RBP8.13□□□□□ -1.11
NECAP1-210ENST00000638237 NDUFA9Q16795 377 aa8.13□□□□□ -1.11
NECAP1-210ENST00000638237 ZNF750Q32MQ0 723 aa8.13□□□□□ -1.11
NECAP1-210ENST00000638237 ESCO2Q56NI9 601 aa8.13□□□□□ -1.11
NECAP1-210ENST00000638237 ZNF793Q6ZN11 406 aa8.13□□□□□ -1.11
NECAP1-210ENST00000638237 DGLUCYQ7Z3D6 616 aa8.13□□□□□ -1.11
NECAP1-210ENST00000638237 COMTD1Q86VU5 262 aa8.13□□□□□ -1.11
NECAP1-210ENST00000638237 KRT78Q8N1N4 520 aa8.13□□□□□ -1.11
NECAP1-210ENST00000638237 GATAD2BQ8WXI9 593 aa8.13□□□□□ -1.11
NECAP1-210ENST00000638237 NECTIN4Q96NY8 510 aa8.13□□□□□ -1.11
NECAP1-210ENST00000638237 QRFPRQ96P65 431 aa8.13□□□□□ -1.11
NECAP1-210ENST00000638237 FERD3LQ96RJ6 166 aa8.13□□□□□ -1.11
NECAP1-210ENST00000638237 INSM2Q96T92 566 aaPredicted RBP8.13□□□□□ -1.11
NECAP1-210ENST00000638237 HDAC8Q9BY41 377 aa8.13□□□□□ -1.11
NECAP1-210ENST00000638237 SERHL2Q9H4I8 314 aa8.13□□□□□ -1.11
NECAP1-210ENST00000638237 KLHL31Q9H511 634 aa8.13□□□□□ -1.11
NECAP1-210ENST00000638237 SATB2Q9UPW6 733 aa8.13□□□□□ -1.11
NECAP1-210ENST00000638237 YBX2Q9Y2T7 364 aaKnown RBP8.13□□□□□ -1.11
NECAP1-210ENST00000638237 TRDV1A0A1B0GX56 115 aa8.13□□□□□ -1.11
NECAP1-210ENST00000638237 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.13□□□□□ -1.11
NECAP1-210ENST00000638237 CASKO14936 926 aa8.13□□□□□ -1.11
NECAP1-210ENST00000638237 PRODHO43272 600 aa8.13□□□□□ -1.11
NECAP1-210ENST00000638237 HPGDSO60760 199 aa8.13□□□□□ -1.11
NECAP1-210ENST00000638237 ERGP11308 486 aa8.13□□□□□ -1.11
NECAP1-210ENST00000638237 LBX1P52954 281 aa8.13□□□□□ -1.11
NECAP1-210ENST00000638237 AP2S1P53680 142 aaPredicted RBP8.13□□□□□ -1.11
NECAP1-210ENST00000638237 LSM11P83369 360 aaKnown RBP eCLIP8.13□□□□□ -1.11
NECAP1-210ENST00000638237 CDK5Q00535 292 aa8.13□□□□□ -1.11
NECAP1-210ENST00000638237 IL18Q14116 193 aa8.13□□□□□ -1.11
NECAP1-210ENST00000638237 ACSM5Q6NUN0 579 aa8.13□□□□□ -1.11
NECAP1-210ENST00000638237 ADAMTSL4Q6UY14 1074 aa8.13□□□□□ -1.11
NECAP1-210ENST00000638237 UBE3DQ7Z6J8 389 aa8.13□□□□□ -1.11
NECAP1-210ENST00000638237 ABI3BPQ7Z7G0 1075 aa8.13□□□□□ -1.11
NECAP1-210ENST00000638237 OR4D11Q8NGI4 311 aa8.13□□□□□ -1.11
NECAP1-210ENST00000638237 MARVELD3Q96A59 401 aa8.13□□□□□ -1.11
NECAP1-210ENST00000638237 CREB3L1Q96BA8 519 aa8.13□□□□□ -1.11
NECAP1-210ENST00000638237 CLIP3Q96DZ5 547 aa8.13□□□□□ -1.11
NECAP1-210ENST00000638237 HYLS1Q96M11 299 aa8.13□□□□□ -1.11
NECAP1-210ENST00000638237 FCRL4Q96PJ5 515 aa8.13□□□□□ -1.11
NECAP1-210ENST00000638237 COQ7Q99807 217 aa8.13□□□□□ -1.11
NECAP1-210ENST00000638237 ATF6BQ99941 703 aa8.13□□□□□ -1.11
NECAP1-210ENST00000638237 AIF1LQ9BQI0 150 aa8.13□□□□□ -1.11
NECAP1-210ENST00000638237 ARHGAP9Q9BRR9 750 aa8.13□□□□□ -1.11
NECAP1-210ENST00000638237 YIPF4Q9BSR8 244 aa8.13□□□□□ -1.11
NECAP1-210ENST00000638237 HDHD5Q9BXW7 423 aa8.13□□□□□ -1.11
NECAP1-210ENST00000638237 MVB12BQ9H7P6 319 aa8.13□□□□□ -1.11
NECAP1-210ENST00000638237 CTPS2Q9NRF8 586 aa8.13□□□□□ -1.11
NECAP1-210ENST00000638237 SIRT3Q9NTG7 399 aaPredicted RBP8.13□□□□□ -1.11
NECAP1-210ENST00000638237 B3GNT2Q9NY97 397 aa8.13□□□□□ -1.11
NECAP1-210ENST00000638237 PHF11Q9UIL8 331 aa8.13□□□□□ -1.11
NECAP1-210ENST00000638237 RWDD3Q9Y3V2 267 aa8.13□□□□□ -1.11
NECAP1-210ENST00000638237 CDH10Q9Y6N8 788 aa8.13□□□□□ -1.11
NECAP1-210ENST00000638237 SNTNA6NMZ2 147 aa8.12□□□□□ -1.11
NECAP1-210ENST00000638237 SHOXO15266 292 aa8.12□□□□□ -1.11
NECAP1-210ENST00000638237 PDPK1O15530 556 aa8.12□□□□□ -1.11
NECAP1-210ENST00000638237 NDUFS4O43181 175 aa8.12□□□□□ -1.11
NECAP1-210ENST00000638237 LRRTM2O43300 516 aa8.12□□□□□ -1.11
NECAP1-210ENST00000638237 CFL1P23528 166 aaKnown RBP8.12□□□□□ -1.11
NECAP1-210ENST00000638237 MMP11P24347 488 aa8.12□□□□□ -1.11
NECAP1-210ENST00000638237 GDI1P31150 447 aa8.12□□□□□ -1.11
NECAP1-210ENST00000638237 CCR8P51685 355 aa8.12□□□□□ -1.11
NECAP1-210ENST00000638237 SNRPNP63162 240 aaKnown RBP8.12□□□□□ -1.11
NECAP1-210ENST00000638237 CSNK1G2P78368 415 aa8.12□□□□□ -1.11
NECAP1-210ENST00000638237 PIN1Q13526 163 aaPredicted RBP8.12□□□□□ -1.11
NECAP1-210ENST00000638237 ANGPT1Q15389 498 aa8.12□□□□□ -1.11
NECAP1-210ENST00000638237 TMEM31Q5JXX7 168 aa8.12□□□□□ -1.11
NECAP1-210ENST00000638237 CCNJQ5T5M9 372 aa8.12□□□□□ -1.11
NECAP1-210ENST00000638237 PODNL1Q6PEZ8 512 aa8.12□□□□□ -1.11
NECAP1-210ENST00000638237 PARM1Q6UWI2 310 aa8.12□□□□□ -1.11
NECAP1-210ENST00000638237 TRILQ7L0X0 811 aa8.12□□□□□ -1.11
NECAP1-210ENST00000638237 ZER1Q7Z7L7 766 aa8.12□□□□□ -1.11
NECAP1-210ENST00000638237 FBXL6Q8N531 539 aa8.12□□□□□ -1.11
NECAP1-210ENST00000638237 LINC00471Q8N535 108 aa8.12□□□□□ -1.11
NECAP1-210ENST00000638237 PHOSPHO2Q8TCD6 241 aa8.12□□□□□ -1.11
NECAP1-210ENST00000638237 GANCQ8TET4 914 aa8.12□□□□□ -1.11
NECAP1-210ENST00000638237 SETD7Q8WTS6 366 aaKnown RBP8.12□□□□□ -1.11
NECAP1-210ENST00000638237 AKAP1Q92667 903 aaKnown RBP eCLIP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms