RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 BCAP29Q9UHQ4 241 aa7.17□□□□□ -1.26
PNKP-229ENST00000637897 NPFFR2Q9Y5X5 522 aa7.17□□□□□ -1.26
PNKP-229ENST00000637897 SPACA6W5XKT8 324 aa7.17□□□□□ -1.26
PNKP-229ENST00000637897 PRRC2AP48634 2157 aaKnown RBP7.17□□□□□ -1.26
PNKP-229ENST00000637897 DNHD1Q96M86 4753 aa7.16□□□□□ -1.26
PNKP-229ENST00000637897 DOCK7Q96N67 2140 aa7.16□□□□□ -1.26
PNKP-229ENST00000637897 MED13LQ71F56 2210 aa7.16□□□□□ -1.26
PNKP-229ENST00000637897 MTORP42345 2549 aa7.16□□□□□ -1.26
PNKP-229ENST00000637897 TRGV5A0A0B4J1U4 118 aa7.16□□□□□ -1.26
PNKP-229ENST00000637897 OR14I1A6ND48 311 aa7.16□□□□□ -1.26
PNKP-229ENST00000637897 OR6C76A6NM76 312 aa7.16□□□□□ -1.26
PNKP-229ENST00000637897 FAM90A27PA6NNH2 459 aa7.16□□□□□ -1.26
PNKP-229ENST00000637897 AIM2O14862 343 aa7.16□□□□□ -1.26
PNKP-229ENST00000637897 OR10H2O60403 315 aa7.16□□□□□ -1.26
PNKP-229ENST00000637897 UGT2B11O75310 529 aa7.16□□□□□ -1.26
PNKP-229ENST00000637897 FKBP6O75344 327 aa7.16□□□□□ -1.26
PNKP-229ENST00000637897 ENTPD5O75356 428 aa7.16□□□□□ -1.26
PNKP-229ENST00000637897 P04436 131 aa7.16□□□□□ -1.26
PNKP-229ENST00000637897 IL3P08700 152 aa7.16□□□□□ -1.26
PNKP-229ENST00000637897 LINC00032P0C843 101 aa7.16□□□□□ -1.26
PNKP-229ENST00000637897 CT45A8P0DMV1 189 aa7.16□□□□□ -1.26
PNKP-229ENST00000637897 CT45A9P0DMV2 189 aa7.16□□□□□ -1.26
PNKP-229ENST00000637897 COX7A2P14406 83 aa7.16□□□□□ -1.26
PNKP-229ENST00000637897 COX6B1P14854 86 aa7.16□□□□□ -1.26
PNKP-229ENST00000637897 PORP16435 677 aaPredicted RBP7.16□□□□□ -1.26
PNKP-229ENST00000637897 ACVR2AP27037 513 aa7.16□□□□□ -1.26
PNKP-229ENST00000637897 PTPN6P29350 595 aa7.16□□□□□ -1.26
PNKP-229ENST00000637897 HMOX2P30519 316 aa7.16□□□□□ -1.26
PNKP-229ENST00000637897 TLX1P31314 330 aaPredicted RBP7.16□□□□□ -1.26
PNKP-229ENST00000637897 TRPC1P48995 793 aa7.16□□□□□ -1.26
PNKP-229ENST00000637897 CDK9P50750 372 aaKnown RBP7.16□□□□□ -1.26
PNKP-229ENST00000637897 MAPK12P53778 367 aa7.16□□□□□ -1.26
PNKP-229ENST00000637897 GAS1P54826 345 aa7.16□□□□□ -1.26
PNKP-229ENST00000637897 ACTR3P61158 418 aa7.16□□□□□ -1.26
PNKP-229ENST00000637897 SLC10A1Q14973 349 aa7.16□□□□□ -1.26
PNKP-229ENST00000637897 KIAA0040Q15053 153 aa7.16□□□□□ -1.26
PNKP-229ENST00000637897 RPS6KA2Q15349 733 aa7.16□□□□□ -1.26
PNKP-229ENST00000637897 AGKQ53H12 422 aa7.16□□□□□ -1.26
PNKP-229ENST00000637897 EIPR1Q53HC9 387 aa7.16□□□□□ -1.26
PNKP-229ENST00000637897 CT45A2Q5DJT8 189 aa7.16□□□□□ -1.26
PNKP-229ENST00000637897 XKR7Q5GH72 579 aa7.16□□□□□ -1.26
PNKP-229ENST00000637897 C1orf146Q5VVC0 180 aa7.16□□□□□ -1.26
PNKP-229ENST00000637897 ZNF585AQ6P3V2 769 aa7.16□□□□□ -1.26
PNKP-229ENST00000637897 PGM2L1Q6PCE3 622 aa7.16□□□□□ -1.26
PNKP-229ENST00000637897 HACD2Q6Y1H2 254 aa7.16□□□□□ -1.26
PNKP-229ENST00000637897 MEX3BQ6ZN04 569 aaKnown RBP7.16□□□□□ -1.26
PNKP-229ENST00000637897 GDF7Q7Z4P5 450 aa7.16□□□□□ -1.26
PNKP-229ENST00000637897 GALNT12Q8IXK2 581 aa7.16□□□□□ -1.26
PNKP-229ENST00000637897 DMRTC2Q8IXT2 367 aaPredicted RBP7.16□□□□□ -1.26
PNKP-229ENST00000637897 MIER2Q8N344 545 aa7.16□□□□□ -1.26
PNKP-229ENST00000637897 WDSUB1Q8N9V3 476 aa7.16□□□□□ -1.26
PNKP-229ENST00000637897 OR4N2Q8NGD1 307 aa7.16□□□□□ -1.26
PNKP-229ENST00000637897 OR52R1Q8NGF1 315 aa7.16□□□□□ -1.26
PNKP-229ENST00000637897 NEIL3Q8TAT5 605 aa7.16□□□□□ -1.26
PNKP-229ENST00000637897 SLC22A8Q8TCC7 542 aa7.16□□□□□ -1.26
PNKP-229ENST00000637897 JADE3Q92613 823 aa7.16□□□□□ -1.26
PNKP-229ENST00000637897 NRGNQ92686 78 aa7.16□□□□□ -1.26
PNKP-229ENST00000637897 ATP6V1E2Q96A05 226 aa7.16□□□□□ -1.26
PNKP-229ENST00000637897 RCN3Q96D15 328 aa7.16□□□□□ -1.26
PNKP-229ENST00000637897 C14orf79Q96F83 325 aa7.16□□□□□ -1.26
PNKP-229ENST00000637897 MARK4Q96L34 752 aa7.16□□□□□ -1.26
PNKP-229ENST00000637897 C3orf30Q96M34 536 aa7.16□□□□□ -1.26
PNKP-229ENST00000637897 ANKRD27Q96NW4 1050 aa7.16□□□□□ -1.26
PNKP-229ENST00000637897 TIMP4Q99727 224 aa7.16□□□□□ -1.26
PNKP-229ENST00000637897 TUBB1Q9H4B7 451 aa7.16□□□□□ -1.26
PNKP-229ENST00000637897 ELOVL6Q9H5J4 265 aa7.16□□□□□ -1.26
PNKP-229ENST00000637897 BRF2Q9HAW0 419 aa7.16□□□□□ -1.26
PNKP-229ENST00000637897 GALNT9Q9HCQ5 603 aa7.16□□□□□ -1.26
PNKP-229ENST00000637897 NOP53Q9NZM5 478 aaKnown RBP7.16□□□□□ -1.26
PNKP-229ENST00000637897 EHD3Q9NZN3 535 aa7.16□□□□□ -1.26
PNKP-229ENST00000637897 STOML1Q9UBI4 398 aa7.16□□□□□ -1.26
PNKP-229ENST00000637897 SLC7A8Q9UHI5 535 aa7.16□□□□□ -1.26
PNKP-229ENST00000637897 SLC6A5Q9Y345 797 aa7.16□□□□□ -1.26
PNKP-229ENST00000637897 PTGDR2Q9Y5Y4 395 aa7.16□□□□□ -1.26
PNKP-229ENST00000637897 VPS13CQ709C8 3753 aa7.16□□□□□ -1.26
PNKP-229ENST00000637897 ANKHD1Q8IWZ3 2542 aaKnown RBP7.16□□□□□ -1.26
PNKP-229ENST00000637897 MED12LQ86YW9 2145 aa7.15□□□□□ -1.26
PNKP-229ENST00000637897 C1orf226A1L170 272 aa7.15□□□□□ -1.26
PNKP-229ENST00000637897 SERTM1A2A2V5 107 aa7.15□□□□□ -1.26
PNKP-229ENST00000637897 TO15178 435 aa7.15□□□□□ -1.26
PNKP-229ENST00000637897 TSPAN2O60636 221 aa7.15□□□□□ -1.26
PNKP-229ENST00000637897 HCN1O60741 890 aa7.15□□□□□ -1.26
PNKP-229ENST00000637897 ERAL1O75616 437 aaKnown RBP7.15□□□□□ -1.26
PNKP-229ENST00000637897 PSMG1O95456 288 aa7.15□□□□□ -1.26
PNKP-229ENST00000637897 HPNP05981 417 aa7.15□□□□□ -1.26
PNKP-229ENST00000637897 HOXD4P09016 255 aaPredicted RBP7.15□□□□□ -1.26
PNKP-229ENST00000637897 NT5EP21589 574 aa7.15□□□□□ -1.26
PNKP-229ENST00000637897 TACR1P25103 407 aa7.15□□□□□ -1.26
PNKP-229ENST00000637897 CHRNB4P30926 498 aa7.15□□□□□ -1.26
PNKP-229ENST00000637897 CEACAM8P31997 349 aaPredicted RBP7.15□□□□□ -1.26
PNKP-229ENST00000637897 ARL1P40616 181 aaPredicted RBP7.15□□□□□ -1.26
PNKP-229ENST00000637897 MAN2A2P49641 1150 aa7.15□□□□□ -1.26
PNKP-229ENST00000637897 ZNF136P52737 540 aa7.15□□□□□ -1.26
PNKP-229ENST00000637897 SMU1Q2TAY7 513 aa7.15□□□□□ -1.26
PNKP-229ENST00000637897 MMEL1Q495T6 779 aa7.15□□□□□ -1.26
PNKP-229ENST00000637897 ATP6AP1LQ52LC2 224 aa7.15□□□□□ -1.26
PNKP-229ENST00000637897 C10orf62Q5T681 223 aaPredicted RBP7.15□□□□□ -1.26
PNKP-229ENST00000637897 C1orf185Q5T7R7 199 aa7.15□□□□□ -1.26
PNKP-229ENST00000637897 TMEM81Q6P7N7 255 aa7.15□□□□□ -1.26
PNKP-229ENST00000637897 GALNT18Q6P9A2 607 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms