RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 PAIP2Q9BPZ3 127 aaKnown RBP12.58□□□□□ -0.4
PNKP-228ENST00000637325 SPOCK3Q9BQ16 436 aa12.58□□□□□ -0.4
PNKP-228ENST00000637325 LMF2Q9BU23 707 aaKnown RBP12.58□□□□□ -0.4
PNKP-228ENST00000637325 C1orf50Q9BV19 199 aa12.58□□□□□ -0.4
PNKP-228ENST00000637325 UGT2B28Q9BY64 529 aa12.58□□□□□ -0.4
PNKP-228ENST00000637325 SDHAF3Q9NRP4 125 aa12.58□□□□□ -0.4
PNKP-228ENST00000637325 ACSS1Q9NUB1 689 aaPredicted RBP12.58□□□□□ -0.4
PNKP-228ENST00000637325 PPP4R1LQ9P1A2 415 aa12.58□□□□□ -0.4
PNKP-228ENST00000637325 Q9UFV3 132 aa12.58□□□□□ -0.4
PNKP-228ENST00000637325 EIF3LQ9Y262 564 aaKnown RBP12.58□□□□□ -0.4
PNKP-228ENST00000637325 APCP25054 2843 aa12.57□□□□□ -0.4
PNKP-228ENST00000637325 ADGRG4Q8IZF6 3080 aa12.57□□□□□ -0.4
PNKP-228ENST00000637325 HSPB2A8KAH6 182 aa12.57□□□□□ -0.4
PNKP-228ENST00000637325 EMC8O43402 210 aa12.57□□□□□ -0.4
PNKP-228ENST00000637325 LYPLA1O75608 230 aaPredicted RBP12.57□□□□□ -0.4
PNKP-228ENST00000637325 ZWINTO95229 277 aa12.57□□□□□ -0.4
PNKP-228ENST00000637325 KCNH1O95259 989 aa12.57□□□□□ -0.4
PNKP-228ENST00000637325 PSMG1O95456 288 aa12.57□□□□□ -0.4
PNKP-228ENST00000637325 EPPINO95925 133 aa12.57□□□□□ -0.4
PNKP-228ENST00000637325 ACTL6AO96019 429 aa12.57□□□□□ -0.4
PNKP-228ENST00000637325 EFNA1P20827 205 aaPredicted RBP12.57□□□□□ -0.4
PNKP-228ENST00000637325 GRK2P25098 689 aa12.57□□□□□ -0.4
PNKP-228ENST00000637325 ADH7P40394 386 aa12.57□□□□□ -0.4
PNKP-228ENST00000637325 ABCE1P61221 599 aaKnown RBP12.57□□□□□ -0.4
PNKP-228ENST00000637325 PDE7AQ13946 482 aa12.57□□□□□ -0.4
PNKP-228ENST00000637325 HSPB2Q16082 182 aa12.57□□□□□ -0.4
PNKP-228ENST00000637325 VPS26BQ4G0F5 336 aa12.57□□□□□ -0.4
PNKP-228ENST00000637325 ACSF3Q4G176 576 aaPredicted RBP12.57□□□□□ -0.4
PNKP-228ENST00000637325 NHSL2Q5HYW2 709 aa12.57□□□□□ -0.4
PNKP-228ENST00000637325 C6orf136Q5SQH8 315 aa12.57□□□□□ -0.4
PNKP-228ENST00000637325 CPTPQ5TA50 214 aa12.57□□□□□ -0.4
PNKP-228ENST00000637325 IL23RQ5VWK5 629 aa12.57□□□□□ -0.4
PNKP-228ENST00000637325 ENPP6Q6UWR7 440 aa12.57□□□□□ -0.4
PNKP-228ENST00000637325 IFNEQ86WN2 208 aa12.57□□□□□ -0.4
PNKP-228ENST00000637325 OR6Y1Q8NGX8 325 aa12.57□□□□□ -0.4
PNKP-228ENST00000637325 GPR151Q8TDV0 419 aa12.57□□□□□ -0.4
PNKP-228ENST00000637325 SLC9A6Q92581 669 aa12.57□□□□□ -0.4
PNKP-228ENST00000637325 C3orf30Q96M34 536 aa12.57□□□□□ -0.4
PNKP-228ENST00000637325 PRPF18Q99633 342 aaKnown RBP12.57□□□□□ -0.4
PNKP-228ENST00000637325 OR2B2Q9GZK3 357 aa12.57□□□□□ -0.4
PNKP-228ENST00000637325 ATAD3AQ9NVI7 634 aa12.57□□□□□ -0.4
PNKP-228ENST00000637325 TAS2R10Q9NYW0 307 aa12.57□□□□□ -0.4
PNKP-228ENST00000637325 ATP6V1HQ9UI12 483 aa12.57□□□□□ -0.4
PNKP-228ENST00000637325 SCAMP2O15127 329 aaKnown RBP12.56□□□□□ -0.4
PNKP-228ENST00000637325 ITM2AO43736 263 aa12.56□□□□□ -0.4
PNKP-228ENST00000637325 ERLIN1O75477 346 aa12.56□□□□□ -0.4
PNKP-228ENST00000637325 TOXO94900 526 aa12.56□□□□□ -0.4
PNKP-228ENST00000637325 IL33O95760 270 aa12.56□□□□□ -0.4
PNKP-228ENST00000637325 IL2RAP01589 272 aa12.56□□□□□ -0.4
PNKP-228ENST00000637325 TCEA1P23193 301 aaKnown RBP12.56□□□□□ -0.4
PNKP-228ENST00000637325 SRD5A2P31213 254 aa12.56□□□□□ -0.4
PNKP-228ENST00000637325 SLC1A6P48664 564 aa12.56□□□□□ -0.4
PNKP-228ENST00000637325 PRR5P85299 388 aa12.56□□□□□ -0.4
PNKP-228ENST00000637325 SRYQ05066 204 aa12.56□□□□□ -0.4
PNKP-228ENST00000637325 STX5Q13190 355 aa12.56□□□□□ -0.4
PNKP-228ENST00000637325 MAD2L1Q13257 205 aaPredicted RBP12.56□□□□□ -0.4
PNKP-228ENST00000637325 RCAN2Q14206 197 aa12.56□□□□□ -0.4
PNKP-228ENST00000637325 PDCD2Q16342 344 aaPredicted RBP12.56□□□□□ -0.4
PNKP-228ENST00000637325 HHATQ5VTY9 493 aa12.56□□□□□ -0.4
PNKP-228ENST00000637325 LACC1Q8IV20 430 aa12.56□□□□□ -0.4
PNKP-228ENST00000637325 TRIM42Q8IWZ5 723 aa12.56□□□□□ -0.4
PNKP-228ENST00000637325 CDRT4Q8N9R6 151 aa12.56□□□□□ -0.4
PNKP-228ENST00000637325 OR7A2PQ8NGA2 310 aa12.56□□□□□ -0.4
PNKP-228ENST00000637325 RMND5BQ96G75 393 aaPredicted RBP12.56□□□□□ -0.4
PNKP-228ENST00000637325 WDYHV1Q96HA8 205 aa12.56□□□□□ -0.4
PNKP-228ENST00000637325 PPP1R36Q96LQ0 422 aa12.56□□□□□ -0.4
PNKP-228ENST00000637325 SFXN2Q96NB2 322 aa12.56□□□□□ -0.4
PNKP-228ENST00000637325 MS4A4EQ96PG1 132 aa12.56□□□□□ -0.4
PNKP-228ENST00000637325 TRIB1Q96RU8 372 aa12.56□□□□□ -0.4
PNKP-228ENST00000637325 PRDM14Q9GZV8 571 aa12.56□□□□□ -0.4
PNKP-228ENST00000637325 ENKD1Q9H0I2 346 aa12.56□□□□□ -0.4
PNKP-228ENST00000637325 FBXL2Q9UKC9 423 aa12.56□□□□□ -0.4
PNKP-228ENST00000637325 ABCG2Q9UNQ0 655 aa12.56□□□□□ -0.4
PNKP-228ENST00000637325 SNX8Q9Y5X2 465 aa12.56□□□□□ -0.4
PNKP-228ENST00000637325 ACTL7BQ9Y614 415 aa12.56□□□□□ -0.4
PNKP-228ENST00000637325 A0A1W2PRB8 838 aa12.55□□□□□ -0.4
PNKP-228ENST00000637325 GXYLT2A0PJZ3 443 aa12.55□□□□□ -0.4
PNKP-228ENST00000637325 H0Y3Z8 333 aa12.55□□□□□ -0.4
PNKP-228ENST00000637325 SNUPNO95149 360 aaKnown RBP12.55□□□□□ -0.4
PNKP-228ENST00000637325 UTS2O95399 124 aa12.55□□□□□ -0.4
PNKP-228ENST00000637325 ALOX5P09917 674 aa12.55□□□□□ -0.4
PNKP-228ENST00000637325 LAMP1P11279 417 aa12.55□□□□□ -0.4
PNKP-228ENST00000637325 BGNP21810 368 aa12.55□□□□□ -0.4
PNKP-228ENST00000637325 DPP4P27487 766 aa12.55□□□□□ -0.4
PNKP-228ENST00000637325 SSTR2P30874 369 aa12.55□□□□□ -0.4
PNKP-228ENST00000637325 FRKP42685 505 aaPredicted RBP12.55□□□□□ -0.4
PNKP-228ENST00000637325 PRIM2P49643 509 aa12.55□□□□□ -0.4
PNKP-228ENST00000637325 GAS1P54826 345 aa12.55□□□□□ -0.4
PNKP-228ENST00000637325 PTGR1Q14914 329 aa12.55□□□□□ -0.4
PNKP-228ENST00000637325 SLC25A35Q3KQZ1 300 aa12.55□□□□□ -0.4
PNKP-228ENST00000637325 LSM12Q3MHD2 195 aaKnown RBP12.55□□□□□ -0.4
PNKP-228ENST00000637325 DCST1Q5T197 706 aa12.55□□□□□ -0.4
PNKP-228ENST00000637325 AAGABQ6PD74 315 aa12.55□□□□□ -0.4
PNKP-228ENST00000637325 LIX1LQ8IVB5 337 aa12.55□□□□□ -0.4
PNKP-228ENST00000637325 NATD1Q8N6N6 113 aa12.55□□□□□ -0.4
PNKP-228ENST00000637325 ZNF781Q8N8C0 355 aa12.55□□□□□ -0.4
PNKP-228ENST00000637325 ANKRD42Q8N9B4 389 aa12.55□□□□□ -0.4
PNKP-228ENST00000637325 FBXO30Q8TB52 745 aa12.55□□□□□ -0.4
PNKP-228ENST00000637325 PIK3R3Q92569 461 aa12.55□□□□□ -0.4
PNKP-228ENST00000637325 JADE3Q92613 823 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms