RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 ZBTB26Q9HCK0 441 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 ADAM29Q9UKF5 820 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 THSD7BQ9C0I4 1608 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 ARHGEF9O43307 516 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 FMO6PO60774 539 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 ITGA10O75578 1167 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 CREG1O75629 220 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 RASAL1O95294 804 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 H6PDO95479 791 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 MT-ND5P03915 603 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 GKN3PP0CG01 181 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 BMP4P12644 408 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 MAGEA3P43357 314 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 TRIM25Q14258 630 aaKnown RBP8.49□□□□□ -1.05
HDAC9-229ENST00000622668 ARSJQ5FYB0 599 aaPredicted RBP8.49□□□□□ -1.05
HDAC9-229ENST00000622668 PDZK1Q5T2W1 519 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 VHLLQ6RSH7 139 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 HIPK1Q86Z02 1210 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 OR52N2Q8NGI0 321 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 SLC2A12Q8TD20 617 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 UCN3Q969E3 161 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 ARL5BQ96KC2 179 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 NPLQ9BXD5 320 aaPredicted RBP8.49□□□□□ -1.05
HDAC9-229ENST00000622668 OLAHQ9NV23 265 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 TCFL5Q9UL49 500 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 ERGIC3Q9Y282 383 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 PCDHB14Q9Y5E9 798 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 PCNX2A6NKB5 2137 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 FGF17O60258 216 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 CTSVO60911 334 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 LINC00271P0C7V0 271 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 SFTPCP11686 197 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 CAPZA1P52907 286 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 KCNC4Q03721 635 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 ECH1Q13011 328 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 CBFBQ13951 182 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 VMACQ2NL98 169 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 RFX4Q33E94 735 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 LANCL3Q6ZV70 420 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 CLEC14AQ86T13 490 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 FITM2Q8N6M3 262 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 OR10G2Q8NGC3 310 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 TSEN15Q8WW01 171 aaKnown RBP8.49□□□□□ -1.05
HDAC9-229ENST00000622668 TBX5Q99593 518 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 CALHM2Q9HA72 323 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 CCNB1IP1Q9NPC3 277 aa8.49□□□□□ -1.05
HDAC9-229ENST00000622668 TAPBPO15533 448 aa8.48□□□□□ -1.05
HDAC9-229ENST00000622668 NOBOXO60393 691 aa8.48□□□□□ -1.05
HDAC9-229ENST00000622668 MRPL33O75394 65 aaKnown RBP8.48□□□□□ -1.05
HDAC9-229ENST00000622668 LIPCP11150 499 aa8.48□□□□□ -1.05
HDAC9-229ENST00000622668 DCTP40126 519 aa8.48□□□□□ -1.05
HDAC9-229ENST00000622668 SLC18A1P54219 525 aa8.48□□□□□ -1.05
HDAC9-229ENST00000622668 POLE2P56282 527 aa8.48□□□□□ -1.05
HDAC9-229ENST00000622668 DMPKQ09013 629 aa8.48□□□□□ -1.05
HDAC9-229ENST00000622668 SSPNQ14714 243 aa8.48□□□□□ -1.05
HDAC9-229ENST00000622668 NANOGP8Q6NSW7 305 aa8.48□□□□□ -1.05
HDAC9-229ENST00000622668 BORAQ6PGQ7 559 aa8.48□□□□□ -1.05
HDAC9-229ENST00000622668 WDR74Q6RFH5 385 aaPredicted RBP8.48□□□□□ -1.05
HDAC9-229ENST00000622668 UNQ6126/PRO20091Q6UXV3 157 aa8.48□□□□□ -1.05
HDAC9-229ENST00000622668 NDUFAF7Q7L592 441 aa8.48□□□□□ -1.05
HDAC9-229ENST00000622668 MAMDC2Q7Z304 686 aaPredicted RBP8.48□□□□□ -1.05
HDAC9-229ENST00000622668 HDDC2Q7Z4H3 204 aa8.48□□□□□ -1.05
HDAC9-229ENST00000622668 FGD2Q7Z6J4 655 aa8.48□□□□□ -1.05
HDAC9-229ENST00000622668 UEVLDQ8IX04 471 aa8.48□□□□□ -1.05
HDAC9-229ENST00000622668 CISD2Q8N5K1 135 aaKnown RBP8.48□□□□□ -1.05
HDAC9-229ENST00000622668 EXD3Q8N9H8 876 aa8.48□□□□□ -1.05
HDAC9-229ENST00000622668 CHTF18Q8WVB6 975 aa8.48□□□□□ -1.05
HDAC9-229ENST00000622668 C16orf58Q96GQ5 468 aa8.48□□□□□ -1.05
HDAC9-229ENST00000622668 LHPPQ9H008 270 aa8.48□□□□□ -1.05
HDAC9-229ENST00000622668 NANOGQ9H9S0 305 aa8.48□□□□□ -1.05
HDAC9-229ENST00000622668 CDH20Q9HBT6 801 aa8.48□□□□□ -1.05
HDAC9-229ENST00000622668 SLC6A20Q9NP91 592 aa8.48□□□□□ -1.05
HDAC9-229ENST00000622668 MED11Q9P086 117 aa8.48□□□□□ -1.05
HDAC9-229ENST00000622668 NKX2-8O15522 239 aa8.48□□□□□ -1.05
HDAC9-229ENST00000622668 MAGEA8P43361 318 aa8.48□□□□□ -1.05
HDAC9-229ENST00000622668 SLC6A8P48029 635 aa8.48□□□□□ -1.05
HDAC9-229ENST00000622668 LSSP48449 732 aa8.48□□□□□ -1.05
HDAC9-229ENST00000622668 CDK9P50750 372 aaKnown RBP8.48□□□□□ -1.05
HDAC9-229ENST00000622668 HOXC5Q00444 222 aa8.48□□□□□ -1.05
HDAC9-229ENST00000622668 RBBP4Q09028 425 aa8.48□□□□□ -1.05
HDAC9-229ENST00000622668 C17orf67Q0P5P2 114 aa8.48□□□□□ -1.05
HDAC9-229ENST00000622668 MLC1Q15049 377 aa8.48□□□□□ -1.05
HDAC9-229ENST00000622668 BNIPLQ7Z465 357 aa8.48□□□□□ -1.05
HDAC9-229ENST00000622668 SLC34A3Q8N130 599 aa8.48□□□□□ -1.05
HDAC9-229ENST00000622668 BRIX1Q8TDN6 353 aaKnown RBP8.48□□□□□ -1.05
HDAC9-229ENST00000622668 THAP4Q8WY91 577 aa8.48□□□□□ -1.05
HDAC9-229ENST00000622668 CIB1Q99828 191 aa8.48□□□□□ -1.05
HDAC9-229ENST00000622668 TSSK6Q9BXA6 273 aa8.48□□□□□ -1.05
HDAC9-229ENST00000622668 OR51B6Q9H340 312 aa8.48□□□□□ -1.05
HDAC9-229ENST00000622668 ANKRA2Q9H9E1 313 aa8.48□□□□□ -1.05
HDAC9-229ENST00000622668 DYNLRB1Q9NP97 96 aa8.48□□□□□ -1.05
HDAC9-229ENST00000622668 PRAMEF25A6NGN4 478 aa8.48□□□□□ -1.05
HDAC9-229ENST00000622668 TOX3O15405 576 aaPredicted RBP8.48□□□□□ -1.05
HDAC9-229ENST00000622668 GSC2O15499 205 aa8.48□□□□□ -1.05
HDAC9-229ENST00000622668 SOX14O95416 240 aa8.48□□□□□ -1.05
HDAC9-229ENST00000622668 PAPLNO95428 1278 aa8.48□□□□□ -1.05
HDAC9-229ENST00000622668 GP1BAP07359 652 aa8.48□□□□□ -1.05
HDAC9-229ENST00000622668 HOXB6P17509 224 aaKnown RBP8.48□□□□□ -1.05
HDAC9-229ENST00000622668 CSRP1P21291 193 aaKnown RBP8.48□□□□□ -1.05
HDAC9-229ENST00000622668 SMSP52788 366 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms