RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 SF3B4Q15427 424 aaKnown RBP eCLIP15.58■□□□□ 0.086e-7■■■■□ 26.7
HMGN3-203ENST00000620514 CYP27C1Q4G0S4 372 aa15.58■□□□□ 0.08
HMGN3-203ENST00000620514 ARSKQ6UWY0 536 aa15.58■□□□□ 0.08
HMGN3-203ENST00000620514 CDH24Q86UP0 819 aa15.58■□□□□ 0.08
HMGN3-203ENST00000620514 IFNEQ86WN2 208 aa15.58■□□□□ 0.08
HMGN3-203ENST00000620514 DDIASQ8IXT1 998 aa15.58■□□□□ 0.08
HMGN3-203ENST00000620514 MBD3L2Q8NHZ7 208 aaPredicted RBP15.58■□□□□ 0.08
HMGN3-203ENST00000620514 ZPLD1Q8TCW7 415 aa15.58■□□□□ 0.08
HMGN3-203ENST00000620514 PPCDCQ96CD2 204 aa15.58■□□□□ 0.08
HMGN3-203ENST00000620514 SH3GL2Q99962 352 aa15.58■□□□□ 0.08
HMGN3-203ENST00000620514 LMF2Q9BU23 707 aaKnown RBP15.58■□□□□ 0.08
HMGN3-203ENST00000620514 ROPN1BQ9BZX4 212 aaPredicted RBP15.58■□□□□ 0.08
HMGN3-203ENST00000620514 REEP4Q9H6H4 257 aa15.58■□□□□ 0.08
HMGN3-203ENST00000620514 CALHM2Q9HA72 323 aa15.58■□□□□ 0.08
HMGN3-203ENST00000620514 ROPN1Q9HAT0 212 aaPredicted RBP15.58■□□□□ 0.08
HMGN3-203ENST00000620514 Q9N2J8 555 aa15.58■□□□□ 0.08
HMGN3-203ENST00000620514 EQTNQ9NQ60 294 aa15.58■□□□□ 0.08
HMGN3-203ENST00000620514 DKKL1Q9UK85 242 aa15.58■□□□□ 0.08
HMGN3-203ENST00000620514 RPH3AQ9Y2J0 694 aaPredicted RBP15.58■□□□□ 0.08
HMGN3-203ENST00000620514 GXYLT2A0PJZ3 443 aa15.57■□□□□ 0.08
HMGN3-203ENST00000620514 H0Y3Z8 333 aa15.57■□□□□ 0.08
HMGN3-203ENST00000620514 SYT5O00445 386 aa15.57■□□□□ 0.08
HMGN3-203ENST00000620514 ZIC3O60481 467 aa15.57■□□□□ 0.08
HMGN3-203ENST00000620514 TBX19O60806 448 aa15.57■□□□□ 0.08
HMGN3-203ENST00000620514 BCKDHAP12694 445 aa15.57■□□□□ 0.08
HMGN3-203ENST00000620514 EFNA1P20827 205 aaPredicted RBP15.57■□□□□ 0.08
HMGN3-203ENST00000620514 DPP4P27487 766 aa15.57■□□□□ 0.08
HMGN3-203ENST00000620514 GABRA3P34903 492 aa15.57■□□□□ 0.08
HMGN3-203ENST00000620514 GPC1P35052 558 aa15.57■□□□□ 0.08
HMGN3-203ENST00000620514 RFX3P48380 749 aa15.57■□□□□ 0.08
HMGN3-203ENST00000620514 LHX2P50458 406 aa15.57■□□□□ 0.08
HMGN3-203ENST00000620514 STX5Q13190 355 aa15.57■□□□□ 0.08
HMGN3-203ENST00000620514 RCAN2Q14206 197 aa15.57■□□□□ 0.08
HMGN3-203ENST00000620514 WDR93Q6P2C0 686 aa15.57■□□□□ 0.08
HMGN3-203ENST00000620514 EMBQ6PCB8 327 aa15.57■□□□□ 0.08
HMGN3-203ENST00000620514 OR4K17Q8NGC6 315 aa15.57■□□□□ 0.08
HMGN3-203ENST00000620514 CAVIN3Q969G5 261 aa15.57■□□□□ 0.08
HMGN3-203ENST00000620514 ZNF764Q96H86 408 aaPredicted RBP15.57■□□□□ 0.08
HMGN3-203ENST00000620514 SFXN2Q96NB2 322 aa15.57■□□□□ 0.08
HMGN3-203ENST00000620514 G6PC3Q9BUM1 346 aa15.57■□□□□ 0.08
HMGN3-203ENST00000620514 DSN1Q9H410 356 aa15.57■□□□□ 0.08
HMGN3-203ENST00000620514 SH3BP4Q9P0V3 963 aa15.57■□□□□ 0.08
HMGN3-203ENST00000620514 PPP4R1LQ9P1A2 415 aa15.57■□□□□ 0.08
HMGN3-203ENST00000620514 ZNF629Q9UEG4 869 aaPredicted RBP15.57■□□□□ 0.08
HMGN3-203ENST00000620514 CCDC168Q8NDH2 2452 aa15.57■□□□□ 0.08
HMGN3-203ENST00000620514 SLU7O95391 586 aaKnown RBP15.56■□□□□ 0.08
HMGN3-203ENST00000620514 IL33O95760 270 aa15.56■□□□□ 0.08
HMGN3-203ENST00000620514 IGKV1D-16P01601 117 aa15.56■□□□□ 0.08
HMGN3-203ENST00000620514 PRPS2P11908 318 aa15.56■□□□□ 0.08
HMGN3-203ENST00000620514 POU3F2P20265 443 aaPredicted RBP15.56■□□□□ 0.08
HMGN3-203ENST00000620514 CTSSP25774 331 aa15.56■□□□□ 0.08
HMGN3-203ENST00000620514 ASCL1P50553 236 aa15.56■□□□□ 0.08
HMGN3-203ENST00000620514 PRKAG1P54619 331 aa15.56■□□□□ 0.08
HMGN3-203ENST00000620514 B3GALT5-AS1P59052 145 aa15.56■□□□□ 0.08
HMGN3-203ENST00000620514 PDE7AQ13946 482 aa15.56■□□□□ 0.08
HMGN3-203ENST00000620514 ZNHIT3Q15649 155 aaPredicted RBP15.56■□□□□ 0.08
HMGN3-203ENST00000620514 DECR1Q16698 335 aa15.56■□□□□ 0.08
HMGN3-203ENST00000620514 CES4AQ5XG92 561 aa15.56■□□□□ 0.08
HMGN3-203ENST00000620514 ENPP6Q6UWR7 440 aa15.56■□□□□ 0.08
HMGN3-203ENST00000620514 MARCH3Q86UD3 253 aa15.56■□□□□ 0.08
HMGN3-203ENST00000620514 TMEM200AQ86VY9 491 aa15.56■□□□□ 0.08
HMGN3-203ENST00000620514 ZZZ3Q8IYH5 903 aa15.56■□□□□ 0.08
HMGN3-203ENST00000620514 FADS6Q8N9I5 356 aa15.56■□□□□ 0.08
HMGN3-203ENST00000620514 OR2M3Q8NG83 312 aa15.56■□□□□ 0.08
HMGN3-203ENST00000620514 PIK3R3Q92569 461 aa15.56■□□□□ 0.08
HMGN3-203ENST00000620514 EML4Q9HC35 981 aaKnown RBP15.56■□□□□ 0.08
HMGN3-203ENST00000620514 MED11Q9P086 117 aa15.56■□□□□ 0.08
HMGN3-203ENST00000620514 TMED5Q9Y3A6 229 aa15.56■□□□□ 0.08
HMGN3-203ENST00000620514 DOCK7Q96N67 2140 aa15.56■□□□□ 0.08
HMGN3-203ENST00000620514 AKAP9Q99996 3911 aa15.55■□□□□ 0.08
HMGN3-203ENST00000620514 CLCA1A8K7I4 914 aa15.55■□□□□ 0.08
HMGN3-203ENST00000620514 IFI6P09912 130 aa15.55■□□□□ 0.08
HMGN3-203ENST00000620514 FRKP42685 505 aaPredicted RBP15.55■□□□□ 0.08
HMGN3-203ENST00000620514 DGKQP52824 942 aa15.55■□□□□ 0.08
HMGN3-203ENST00000620514 MANFP55145 182 aaKnown RBP15.55■□□□□ 0.08
HMGN3-203ENST00000620514 DSCR4P56555 118 aaPredicted RBP15.55■□□□□ 0.08
HMGN3-203ENST00000620514 CLDN18P56856 261 aa15.55■□□□□ 0.08
HMGN3-203ENST00000620514 FOXF2Q12947 444 aa15.55■□□□□ 0.08
HMGN3-203ENST00000620514 FBXL19-AS1Q494R0 122 aa15.55■□□□□ 0.08
HMGN3-203ENST00000620514 AAGABQ6PD74 315 aa15.55■□□□□ 0.08
HMGN3-203ENST00000620514 ADGRE4PQ86SQ3 457 aa15.55■□□□□ 0.08
HMGN3-203ENST00000620514 EXOC3L1Q86VI1 746 aa15.55■□□□□ 0.08
HMGN3-203ENST00000620514 NUP43Q8NFH3 380 aa15.55■□□□□ 0.08
HMGN3-203ENST00000620514 ZFP28Q8NHY6 868 aa15.55■□□□□ 0.08
HMGN3-203ENST00000620514 FBXO30Q8TB52 745 aa15.55■□□□□ 0.08
HMGN3-203ENST00000620514 NRGNQ92686 78 aa15.55■□□□□ 0.08
HMGN3-203ENST00000620514 RNASE6Q93091 150 aaKnown RBP15.55■□□□□ 0.08
HMGN3-203ENST00000620514 RMND5BQ96G75 393 aaPredicted RBP15.55■□□□□ 0.08
HMGN3-203ENST00000620514 C3orf30Q96M34 536 aa15.55■□□□□ 0.08
HMGN3-203ENST00000620514 SLC24A3Q9HC58 644 aa15.55■□□□□ 0.08
HMGN3-203ENST00000620514 CRIM1Q9NZV1 1036 aa15.55■□□□□ 0.08
HMGN3-203ENST00000620514 ZDHHC2Q9UIJ5 367 aa15.55■□□□□ 0.08
HMGN3-203ENST00000620514 ABCG2Q9UNQ0 655 aa15.55■□□□□ 0.08
HMGN3-203ENST00000620514 MRPS18CQ9Y3D5 142 aaKnown RBP15.55■□□□□ 0.08
HMGN3-203ENST00000620514 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.54■□□□□ 0.08
HMGN3-203ENST00000620514 TYROBPO43914 113 aa15.54■□□□□ 0.08
HMGN3-203ENST00000620514 PEX11AO75192 247 aa15.54■□□□□ 0.08
HMGN3-203ENST00000620514 SKAP2O75563 359 aaPredicted RBP15.54■□□□□ 0.08
HMGN3-203ENST00000620514 ZWINTO95229 277 aa15.54■□□□□ 0.08
HMGN3-203ENST00000620514 UTS2O95399 124 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms