RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 SLC9B1P1A6NJY1 282 aa11.59□□□□□ -0.55
CIITA-212ENST00000618207 I3L1I5 382 aaPredicted RBP11.59□□□□□ -0.55
CIITA-212ENST00000618207 PEX12O00623 359 aa11.59□□□□□ -0.55
CIITA-212ENST00000618207 KPNA4O00629 521 aaPredicted RBP11.59□□□□□ -0.55
CIITA-212ENST00000618207 PRKNO60260 465 aaPredicted RBP11.59□□□□□ -0.55
CIITA-212ENST00000618207 PIP5K1CO60331 668 aa11.59□□□□□ -0.55
CIITA-212ENST00000618207 CYP7B1O75881 506 aa11.59□□□□□ -0.55
CIITA-212ENST00000618207 ENDOUP21128 410 aaKnown RBP11.59□□□□□ -0.55
CIITA-212ENST00000618207 SOX18P35713 384 aa11.59□□□□□ -0.55
CIITA-212ENST00000618207 SOX3P41225 446 aa11.59□□□□□ -0.55
CIITA-212ENST00000618207 SMIM11AP58511 58 aa11.59□□□□□ -0.55
CIITA-212ENST00000618207 MAT1AQ00266 395 aaKnown RBP11.59□□□□□ -0.55
CIITA-212ENST00000618207 MAPK14Q16539 360 aa11.59□□□□□ -0.55
CIITA-212ENST00000618207 UBE2UQ5VVX9 321 aa11.59□□□□□ -0.55
CIITA-212ENST00000618207 CDC73Q6P1J9 531 aa11.59□□□□□ -0.55
CIITA-212ENST00000618207 FRRS1Q6ZNA5 592 aa11.59□□□□□ -0.55
CIITA-212ENST00000618207 SH3YL1Q96HL8 342 aaPredicted RBP11.59□□□□□ -0.55
CIITA-212ENST00000618207 MS4A4EQ96PG1 132 aa11.59□□□□□ -0.55
CIITA-212ENST00000618207 PINK1Q9BXM7 581 aa11.59□□□□□ -0.55
CIITA-212ENST00000618207 C6orf62Q9GZU0 229 aaPredicted RBP11.59□□□□□ -0.55
CIITA-212ENST00000618207 ENOPH1Q9UHY7 261 aa11.59□□□□□ -0.55
CIITA-212ENST00000618207 ACAD8Q9UKU7 415 aa11.59□□□□□ -0.55
CIITA-212ENST00000618207 LRP4O75096 1905 aa11.59□□□□□ -0.55
CIITA-212ENST00000618207 DSPPQ9NZW4 1301 aa11.59□□□□□ -0.55
CIITA-212ENST00000618207 FRYLO94915 3013 aa11.59□□□□□ -0.55
CIITA-212ENST00000618207 A0A0J9YY10 115 aa11.59□□□□□ -0.55
CIITA-212ENST00000618207 WWP2O00308 870 aa11.59□□□□□ -0.55
CIITA-212ENST00000618207 AP3D1O14617 1153 aa11.59□□□□□ -0.55
CIITA-212ENST00000618207 TNFSF14O43557 240 aa11.59□□□□□ -0.55
CIITA-212ENST00000618207 TP53P04637 393 aaPredicted RBP11.59□□□□□ -0.55
CIITA-212ENST00000618207 SMIM10L1P0DMW3 83 aa11.59□□□□□ -0.55
CIITA-212ENST00000618207 ACP2P11117 423 aa11.59□□□□□ -0.55
CIITA-212ENST00000618207 PRG2P13727 222 aa11.59□□□□□ -0.55
CIITA-212ENST00000618207 FUT1P19526 365 aa11.59□□□□□ -0.55
CIITA-212ENST00000618207 DGUOKQ16854 277 aa11.59□□□□□ -0.55
CIITA-212ENST00000618207 ZNF362Q5T0B9 420 aaPredicted RBP11.59□□□□□ -0.55
CIITA-212ENST00000618207 DGAT2L6Q6ZPD8 337 aa11.59□□□□□ -0.55
CIITA-212ENST00000618207 IGFN1Q86VF2 1251 aa11.59□□□□□ -0.55
CIITA-212ENST00000618207 GALNT12Q8IXK2 581 aa11.59□□□□□ -0.55
CIITA-212ENST00000618207 MORN4Q8NDC4 146 aa11.59□□□□□ -0.55
CIITA-212ENST00000618207 TMEM255BQ8WV15 326 aa11.59□□□□□ -0.55
CIITA-212ENST00000618207 SMIM10Q96HG1 83 aa11.59□□□□□ -0.55
CIITA-212ENST00000618207 MGLLQ99685 303 aa11.59□□□□□ -0.55
CIITA-212ENST00000618207 LRRC61Q9BV99 259 aa11.59□□□□□ -0.55
CIITA-212ENST00000618207 TSSK6Q9BXA6 273 aa11.59□□□□□ -0.55
CIITA-212ENST00000618207 FOXQ1Q9C009 403 aa11.59□□□□□ -0.55
CIITA-212ENST00000618207 THADAQ6YHU6 1953 aa11.58□□□□□ -0.55
CIITA-212ENST00000618207 STK25O00506 426 aa11.58□□□□□ -0.56
CIITA-212ENST00000618207 OXSR1O95747 527 aaPredicted RBP11.58□□□□□ -0.56
CIITA-212ENST00000618207 MSL3P1P0C860 447 aa11.58□□□□□ -0.56
CIITA-212ENST00000618207 ZNF10P21506 573 aaPredicted RBP11.58□□□□□ -0.56
CIITA-212ENST00000618207 GIPRP48546 466 aa11.58□□□□□ -0.56
CIITA-212ENST00000618207 UBE2IP63279 158 aaKnown RBP11.58□□□□□ -0.56
CIITA-212ENST00000618207 SLC30A6Q6NXT4 461 aa11.58□□□□□ -0.56
CIITA-212ENST00000618207 KIF18BQ86Y91 864 aa11.58□□□□□ -0.56
CIITA-212ENST00000618207 FNDC8Q8TC99 324 aa11.58□□□□□ -0.56
CIITA-212ENST00000618207 LMX1AQ8TE12 382 aa11.58□□□□□ -0.56
CIITA-212ENST00000618207 MOAP1Q96BY2 351 aa11.58□□□□□ -0.56
CIITA-212ENST00000618207 LRR1Q96L50 414 aa11.58□□□□□ -0.56
CIITA-212ENST00000618207 Q96MT0 163 aa11.58□□□□□ -0.56
CIITA-212ENST00000618207 MAP3K3Q99759 626 aa11.58□□□□□ -0.56
CIITA-212ENST00000618207 NECTIN3Q9NQS3 549 aa11.58□□□□□ -0.56
CIITA-212ENST00000618207 KLHL28Q9NXS3 571 aa11.58□□□□□ -0.56
CIITA-212ENST00000618207 RP1P56715 2156 aa11.58□□□□□ -0.56
CIITA-212ENST00000618207 ALPK2Q86TB3 2170 aa11.58□□□□□ -0.56
CIITA-212ENST00000618207 CHRNB1P11230 501 aa11.58□□□□□ -0.56
CIITA-212ENST00000618207 ENPP1P22413 925 aa11.58□□□□□ -0.56
CIITA-212ENST00000618207 SLX4IPQ5VYV7 408 aa11.58□□□□□ -0.56
CIITA-212ENST00000618207 NRMQ8IXM6 262 aa11.58□□□□□ -0.56
CIITA-212ENST00000618207 COX18Q8N8Q8 333 aa11.58□□□□□ -0.56
CIITA-212ENST00000618207 DYNC2LI1Q8TCX1 351 aa11.58□□□□□ -0.56
CIITA-212ENST00000618207 PEX11GQ96HA9 241 aa11.58□□□□□ -0.56
CIITA-212ENST00000618207 TRNT1Q96Q11 434 aaKnown RBP11.58□□□□□ -0.56
CIITA-212ENST00000618207 SDF2Q99470 211 aa11.58□□□□□ -0.56
CIITA-212ENST00000618207 BTBD2Q9BX70 525 aa11.58□□□□□ -0.56
CIITA-212ENST00000618207 IFT52Q9Y366 437 aa11.58□□□□□ -0.56
CIITA-212ENST00000618207 SPACA6W5XKT8 324 aa11.58□□□□□ -0.56
CIITA-212ENST00000618207 CFAP54Q96N23 3096 aa11.58□□□□□ -0.56
CIITA-212ENST00000618207 A0A1W2PPC4 97 aa11.57□□□□□ -0.56
CIITA-212ENST00000618207 GXYLT2A0PJZ3 443 aa11.57□□□□□ -0.56
CIITA-212ENST00000618207 OR5K3A6NET4 321 aa11.57□□□□□ -0.56
CIITA-212ENST00000618207 DUXAA6NLW8 204 aa11.57□□□□□ -0.56
CIITA-212ENST00000618207 MBTPS2O43462 519 aa11.57□□□□□ -0.56
CIITA-212ENST00000618207 OR10H2O60403 315 aa11.57□□□□□ -0.56
CIITA-212ENST00000618207 GABRA3P34903 492 aa11.57□□□□□ -0.56
CIITA-212ENST00000618207 RGS6P49758 472 aa11.57□□□□□ -0.56
CIITA-212ENST00000618207 ZNF91Q05481 1191 aa11.57□□□□□ -0.56
CIITA-212ENST00000618207 SLC13A2Q13183 592 aa11.57□□□□□ -0.56
CIITA-212ENST00000618207 PLAG1Q6DJT9 500 aa11.57□□□□□ -0.56
CIITA-212ENST00000618207 TYW3Q6IPR3 259 aaKnown RBP11.57□□□□□ -0.56
CIITA-212ENST00000618207 B3GLCTQ6Y288 498 aa11.57□□□□□ -0.56
CIITA-212ENST00000618207 ZNF836Q6ZNA1 936 aa11.57□□□□□ -0.56
CIITA-212ENST00000618207 FUZQ9BT04 418 aa11.57□□□□□ -0.56
CIITA-212ENST00000618207 FKBP14Q9NWM8 211 aa11.57□□□□□ -0.56
CIITA-212ENST00000618207 SLC7A7Q9UM01 511 aa11.57□□□□□ -0.56
CIITA-212ENST00000618207 LIPT1Q9Y234 373 aa11.57□□□□□ -0.56
CIITA-212ENST00000618207 ZNF443Q9Y2A4 671 aaPredicted RBP11.57□□□□□ -0.56
CIITA-212ENST00000618207 MUC3AQ02505 3323 aa11.57□□□□□ -0.56
CIITA-212ENST00000618207 KIR2DS5A0A0G2JLQ3 304 aa11.57□□□□□ -0.56
CIITA-212ENST00000618207 A0A0G2JNG1 304 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms