RNA–Protein interactions for RNA: ENST00000617539.1

NEDD4L-237, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene NEDD4L, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-237ENST00000617539 IL18BPO95998 194 aa20.13■□□□□ 0.81
NEDD4L-237ENST00000617539 TMIGD3P0DMS9 266 aaPredicted RBP20.13■□□□□ 0.81
NEDD4L-237ENST00000617539 ZNF708P17019 499 aa20.13■□□□□ 0.81
NEDD4L-237ENST00000617539 OPRM1P35372 400 aa20.13■□□□□ 0.81
NEDD4L-237ENST00000617539 GCKP35557 465 aa20.13■□□□□ 0.81
NEDD4L-237ENST00000617539 CYP27C1Q4G0S4 372 aa20.13■□□□□ 0.81
NEDD4L-237ENST00000617539 ZNF385BQ569K4 471 aa20.13■□□□□ 0.81
NEDD4L-237ENST00000617539 GFM2Q969S9 779 aaKnown RBP20.13■□□□□ 0.81
NEDD4L-237ENST00000617539 CIDECQ96AQ7 238 aaPredicted RBP20.13■□□□□ 0.81
NEDD4L-237ENST00000617539 TRIM44Q96DX7 344 aaPredicted RBP20.13■□□□□ 0.81
NEDD4L-237ENST00000617539 SFXN2Q96NB2 322 aa20.13■□□□□ 0.81
NEDD4L-237ENST00000617539 LMF2Q9BU23 707 aaKnown RBP20.13■□□□□ 0.81
NEDD4L-237ENST00000617539 LRTM1Q9HBL6 345 aa20.13■□□□□ 0.81
NEDD4L-237ENST00000617539 RASSF1Q9NS23 344 aa20.13■□□□□ 0.81
NEDD4L-237ENST00000617539 C1orf109Q9NX04 203 aa20.13■□□□□ 0.81
NEDD4L-237ENST00000617539 MKS1Q9NXB0 559 aa20.13■□□□□ 0.81
NEDD4L-237ENST00000617539 DKKL1Q9UK85 242 aa20.13■□□□□ 0.81
NEDD4L-237ENST00000617539 RPH3AQ9Y2J0 694 aaPredicted RBP20.13■□□□□ 0.81
NEDD4L-237ENST00000617539 RCBTB2O95199 551 aa20.12■□□□□ 0.81
NEDD4L-237ENST00000617539 SDC1P18827 310 aa20.12■□□□□ 0.81
NEDD4L-237ENST00000617539 CHMP24386 653 aa20.12■□□□□ 0.81
NEDD4L-237ENST00000617539 DPP4P27487 766 aa20.12■□□□□ 0.81
NEDD4L-237ENST00000617539 PEX19P40855 299 aa20.12■□□□□ 0.81
NEDD4L-237ENST00000617539 DGKQP52824 942 aa20.12■□□□□ 0.81
NEDD4L-237ENST00000617539 MRPS22P82650 360 aaKnown RBP20.12■□□□□ 0.81
NEDD4L-237ENST00000617539 KANK2Q63ZY3 851 aa20.12■□□□□ 0.81
NEDD4L-237ENST00000617539 RNF165Q6ZSG1 346 aa20.12■□□□□ 0.81
NEDD4L-237ENST00000617539 OR2M3Q8NG83 312 aa20.12■□□□□ 0.81
NEDD4L-237ENST00000617539 FAM222BQ8WU58 562 aa20.12■□□□□ 0.81
NEDD4L-237ENST00000617539 WNT2BQ93097 391 aa20.12■□□□□ 0.81
NEDD4L-237ENST00000617539 ZNF764Q96H86 408 aaPredicted RBP20.12■□□□□ 0.81
NEDD4L-237ENST00000617539 POLDIP3Q9BY77 421 aaKnown RBP20.12■□□□□ 0.81
NEDD4L-237ENST00000617539 DSN1Q9H410 356 aa20.12■□□□□ 0.81
NEDD4L-237ENST00000617539 FOXD3Q9UJU5 478 aaPredicted RBP20.12■□□□□ 0.81
NEDD4L-237ENST00000617539 FIS1Q9Y3D6 152 aa20.12■□□□□ 0.81
NEDD4L-237ENST00000617539 DNAJC15Q9Y5T4 150 aa20.12■□□□□ 0.81
NEDD4L-237ENST00000617539 A6NNC1 897 aa20.11■□□□□ 0.81
NEDD4L-237ENST00000617539 TMEM233B4DJY2 109 aa20.11■□□□□ 0.81
NEDD4L-237ENST00000617539 SLC28A1O00337 649 aa20.11■□□□□ 0.81
NEDD4L-237ENST00000617539 IL33O95760 270 aa20.11■□□□□ 0.81
NEDD4L-237ENST00000617539 IGKV1D-16P01601 117 aa20.11■□□□□ 0.81
NEDD4L-237ENST00000617539 CHRNGP07510 517 aa20.11■□□□□ 0.81
NEDD4L-237ENST00000617539 IFI6P09912 130 aa20.11■□□□□ 0.81
NEDD4L-237ENST00000617539 IST1P53990 364 aa20.11■□□□□ 0.81
NEDD4L-237ENST00000617539 DSCR4P56555 118 aaPredicted RBP20.11■□□□□ 0.81
NEDD4L-237ENST00000617539 HSPB3Q12988 150 aa20.11■□□□□ 0.81
NEDD4L-237ENST00000617539 RFTN2Q52LD8 501 aaPredicted RBP20.11■□□□□ 0.81
NEDD4L-237ENST00000617539 AAGABQ6PD74 315 aa20.11■□□□□ 0.81
NEDD4L-237ENST00000617539 GCNT2Q8N0V5 402 aa20.11■□□□□ 0.81
NEDD4L-237ENST00000617539 BANPQ8N9N5 519 aa20.11■□□□□ 0.81
NEDD4L-237ENST00000617539 OR4K17Q8NGC6 315 aa20.11■□□□□ 0.81
NEDD4L-237ENST00000617539 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.11■□□□□ 0.819e-9■■□□□ 11.5
NEDD4L-237ENST00000617539 HOXB13Q92826 284 aaPredicted RBP20.11■□□□□ 0.81
NEDD4L-237ENST00000617539 LRRC46Q96FV0 321 aa20.11■□□□□ 0.81
NEDD4L-237ENST00000617539 APOPT1Q96IL0 206 aa20.11■□□□□ 0.81
NEDD4L-237ENST00000617539 CCT7Q99832 543 aa20.11■□□□□ 0.81
NEDD4L-237ENST00000617539 CLEC4MQ9H2X3 399 aaPredicted RBP20.11■□□□□ 0.81
NEDD4L-237ENST00000617539 PPP4R1LQ9P1A2 415 aa20.11■□□□□ 0.81
NEDD4L-237ENST00000617539 ABCG2Q9UNQ0 655 aa20.11■□□□□ 0.81
NEDD4L-237ENST00000617539 GXYLT2A0PJZ3 443 aa20.1■□□□□ 0.81
NEDD4L-237ENST00000617539 LSM1O15116 133 aaKnown RBP20.1■□□□□ 0.81
NEDD4L-237ENST00000617539 PDPK1O15530 556 aa20.1■□□□□ 0.81
NEDD4L-237ENST00000617539 RGS14O43566 566 aa20.1■□□□□ 0.81
NEDD4L-237ENST00000617539 HCRTR2O43614 444 aa20.1■□□□□ 0.81
NEDD4L-237ENST00000617539 TRIM13O60858 407 aa20.1■□□□□ 0.81
NEDD4L-237ENST00000617539 TGM6O95932 706 aa20.1■□□□□ 0.81
NEDD4L-237ENST00000617539 LINC00032P0C843 101 aa20.1■□□□□ 0.81
NEDD4L-237ENST00000617539 ALDH3A1P30838 453 aa20.1■□□□□ 0.81
NEDD4L-237ENST00000617539 MAP3K8P41279 467 aa20.1■□□□□ 0.81
NEDD4L-237ENST00000617539 ART1P52961 327 aa20.1■□□□□ 0.81
NEDD4L-237ENST00000617539 CLDN15P56746 228 aa20.1■□□□□ 0.81
NEDD4L-237ENST00000617539 STX5Q13190 355 aa20.1■□□□□ 0.81
NEDD4L-237ENST00000617539 PDE7AQ13946 482 aa20.1■□□□□ 0.81
NEDD4L-237ENST00000617539 DECR1Q16698 335 aa20.1■□□□□ 0.81
NEDD4L-237ENST00000617539 UGT3A2Q3SY77 523 aa20.1■□□□□ 0.81
NEDD4L-237ENST00000617539 TRABD2AQ86V40 505 aa20.1■□□□□ 0.81
NEDD4L-237ENST00000617539 CLHC1Q8NHS4 586 aa20.1■□□□□ 0.81
NEDD4L-237ENST00000617539 INTS12Q96CB8 462 aaKnown RBP20.1■□□□□ 0.81
NEDD4L-237ENST00000617539 ZFP3Q96NJ6 502 aa20.1■□□□□ 0.81
NEDD4L-237ENST00000617539 TSSK3Q96PN8 268 aa20.1■□□□□ 0.81
NEDD4L-237ENST00000617539 TM9SF2Q99805 663 aa20.1■□□□□ 0.81
NEDD4L-237ENST00000617539 TRMOQ9BU70 441 aa20.1■□□□□ 0.81
NEDD4L-237ENST00000617539 MECRQ9BV79 373 aa20.1■□□□□ 0.81
NEDD4L-237ENST00000617539 SFXN3Q9BWM7 321 aa20.1■□□□□ 0.81
NEDD4L-237ENST00000617539 Q9N2J8 555 aa20.1■□□□□ 0.81
NEDD4L-237ENST00000617539 FAM120CQ9NX05 1096 aaKnown RBP20.1■□□□□ 0.81
NEDD4L-237ENST00000617539 MED11Q9P086 117 aa20.1■□□□□ 0.81
NEDD4L-237ENST00000617539 SLC17A7Q9P2U7 560 aa20.1■□□□□ 0.81
NEDD4L-237ENST00000617539 BAIAP2L1Q9UHR4 511 aa20.1■□□□□ 0.81
NEDD4L-237ENST00000617539 MID2Q9UJV3 735 aa20.1■□□□□ 0.81
NEDD4L-237ENST00000617539 NF1P21359 2839 aa20.1■□□□□ 0.81
NEDD4L-237ENST00000617539 ZNF469Q96JG9 3925 aaPredicted RBP20.09■□□□□ 0.81
NEDD4L-237ENST00000617539 TLDC2A0PJX2 215 aa20.09■□□□□ 0.81
NEDD4L-237ENST00000617539 AKAP10O43572 662 aa20.09■□□□□ 0.81
NEDD4L-237ENST00000617539 TBX19O60806 448 aa20.09■□□□□ 0.81
NEDD4L-237ENST00000617539 FRKP42685 505 aaPredicted RBP20.09■□□□□ 0.81
NEDD4L-237ENST00000617539 RPL38P63173 70 aaKnown RBP20.09■□□□□ 0.81
NEDD4L-237ENST00000617539 SORDQ00796 357 aa20.09■□□□□ 0.81
NEDD4L-237ENST00000617539 DAZAP2Q15038 168 aaPredicted RBP20.09■□□□□ 0.81
NEDD4L-237ENST00000617539 APOOLQ6UXV4 268 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms