RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 ALKBH1Q13686 389 aaKnown RBP12.82□□□□□ -0.36
PPP4R3B-205ENST00000616288 DACT2Q5SW24 774 aa12.82□□□□□ -0.36
PPP4R3B-205ENST00000616288 REEP3Q6NUK4 255 aa12.82□□□□□ -0.36
PPP4R3B-205ENST00000616288 NLGN1Q8N2Q7 840 aa12.82□□□□□ -0.36
PPP4R3B-205ENST00000616288 OR52I1Q8NGK6 324 aa12.82□□□□□ -0.36
PPP4R3B-205ENST00000616288 IMP4Q96G21 291 aaKnown RBP12.82□□□□□ -0.36
PPP4R3B-205ENST00000616288 TSGA13Q96PP4 275 aa12.82□□□□□ -0.36
PPP4R3B-205ENST00000616288 PRO1933Q9H354 126 aa12.82□□□□□ -0.36
PPP4R3B-205ENST00000616288 SLC6A13Q9NSD5 602 aa12.82□□□□□ -0.36
PPP4R3B-205ENST00000616288 ASB1Q9Y576 335 aa12.82□□□□□ -0.36
PPP4R3B-205ENST00000616288 SRCAPQ6ZRS2 3230 aa12.82□□□□□ -0.36
PPP4R3B-205ENST00000616288 SIPA1L3O60292 1781 aaPredicted RBP12.82□□□□□ -0.36
PPP4R3B-205ENST00000616288 RGPD5Q99666 1765 aa12.82□□□□□ -0.36
PPP4R3B-205ENST00000616288 FAAHO00519 579 aa12.82□□□□□ -0.36
PPP4R3B-205ENST00000616288 CYTIPO60759 359 aa12.82□□□□□ -0.36
PPP4R3B-205ENST00000616288 TGFB1P01137 390 aa12.82□□□□□ -0.36
PPP4R3B-205ENST00000616288 INHAP05111 366 aa12.82□□□□□ -0.36
PPP4R3B-205ENST00000616288 EDNRAP25101 427 aa12.82□□□□□ -0.36
PPP4R3B-205ENST00000616288 NTSP30990 170 aa12.82□□□□□ -0.36
PPP4R3B-205ENST00000616288 RAD52P43351 418 aa12.82□□□□□ -0.36
PPP4R3B-205ENST00000616288 LILRA4P59901 499 aa12.82□□□□□ -0.36
PPP4R3B-205ENST00000616288 CACNG1Q06432 222 aa12.82□□□□□ -0.36
PPP4R3B-205ENST00000616288 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.82□□□□□ -0.364e-7■■□□□ 12.8
PPP4R3B-205ENST00000616288 CHST13Q8NET6 341 aa12.82□□□□□ -0.36
PPP4R3B-205ENST00000616288 BCL2L14Q9BZR8 327 aa12.82□□□□□ -0.36
PPP4R3B-205ENST00000616288 GABARAPL1Q9H0R8 117 aa12.82□□□□□ -0.36
PPP4R3B-205ENST00000616288 PURGQ9UJV8 347 aaKnown RBP12.82□□□□□ -0.36
PPP4R3B-205ENST00000616288 NRCAMQ92823 1304 aa12.82□□□□□ -0.36
PPP4R3B-205ENST00000616288 TRBV4-1A0A0J9YWV2 114 aa12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 PQBP1O60828 265 aaKnown RBP12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 POMCP01189 267 aa12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 ACVRL1P37023 503 aa12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 RPL3P39023 403 aaKnown RBP12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 GCGRP47871 477 aa12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 HCCSP53701 268 aa12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 HLXQ14774 488 aaPredicted RBP12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 PCBP2Q15366 365 aaKnown RBP eCLIP12.81□□□□□ -0.365e-8■□□□□ 10.8
PPP4R3B-205ENST00000616288 RHEBQ15382 184 aa12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 TCEAL6Q6IPX3 200 aa12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 FAAP20Q6NZ36 180 aa12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 FIGNL1Q6PIW4 674 aa12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 TSSK4Q6SA08 328 aa12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 MTSS1LQ765P7 747 aa12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 ZNF627Q7L945 461 aa12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 OR10H5Q8NGA6 315 aa12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 MFSD8Q8NHS3 518 aa12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 BBS10Q8TAM1 723 aa12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 PAPOLGQ9BWT3 736 aaKnown RBP12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 TMEM45AQ9NWC5 275 aa12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 GHRLQ9UBU3 117 aa12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 ZNF223Q9UK11 482 aaPredicted RBP12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 MRPS23Q9Y3D9 190 aaKnown RBP12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 CATP04040 527 aaKnown RBP12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 EPHX1P07099 455 aa12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 RPL4P36578 427 aaKnown RBP12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 SOX2P48431 317 aa12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 SELENOPP49908 381 aa12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 ZNF616Q08AN1 781 aa12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 PTPRRQ15256 657 aa12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 PCGF3Q3KNV8 242 aa12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 CCDC71Q8IV32 467 aaPredicted RBP12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 ZNF565Q8N9K5 539 aa12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 OR4E2Q8NGC2 313 aa12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 OR5M3Q8NGP4 307 aa12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 COL26A1Q96A83 441 aa12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 ACPTQ9BZG2 426 aa12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 IKZF2Q9UKS7 526 aa12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 PCDHGA2Q9Y5H1 932 aa12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 RHOQP17081 205 aa12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 RPL17P18621 184 aaKnown RBP12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 RGS19P49795 217 aa12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 S100A10P60903 97 aa12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 ODF4Q2M2E3 257 aa12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 RPS26P11Q5JNZ5 115 aaPredicted RBP12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 SLC29A4Q7RTT9 530 aa12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 C2orf73Q8N5S3 287 aaPredicted RBP12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 RAB3CQ96E17 227 aa12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 PGAP3Q96FM1 320 aaPredicted RBP12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 RSRP1Q9BUV0 290 aa12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 BRD9Q9H8M2 597 aa12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 PDLIM7Q9NR12 457 aa12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 DCAF16Q9NXF7 216 aa12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 GSKIPQ9P0R6 139 aa12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 ZNF225Q9UK10 706 aa12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 CSNK1G3Q9Y6M4 447 aa12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 MAST2Q6P0Q8 1798 aa12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 MEIKINA0A087WXM9 373 aa12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 A0A1B0GV90 55 aa12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 A0A1W2PQH9 124 aa12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 CDC40O60508 579 aaKnown RBP eCLIP12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 EIF3GO75821 320 aaKnown RBP eCLIP12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 RPP14O95059 124 aaKnown RBP12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 RAB6AP20340 208 aa12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 GSTM3P21266 225 aa12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 CD9P21926 228 aa12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 NKX6-1P78426 367 aaPredicted RBP12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 GLYR1Q49A26 553 aaPredicted RBP12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 ZNF311Q5JNZ3 666 aa12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 FAM69AQ5T7M9 428 aa12.81□□□□□ -0.36
PPP4R3B-205ENST00000616288 KIAA0319Q5VV43 1072 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms