RNA–Protein interactions for RNA: ENST00000608568.1

SSX9-202, Transcript of Protein SSX9, humanhuman

TSL 4 BASIC

Gene SSX9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9-202ENST00000608568 C3orf30Q96M34 536 aa4.79□□□□□ -1.64
SSX9-202ENST00000608568 ZNF599Q96NL3 588 aa4.79□□□□□ -1.64
SSX9-202ENST00000608568 CSPG4P5Q96PW8 444 aa4.79□□□□□ -1.64
SSX9-202ENST00000608568 SLC38A3Q99624 504 aa4.79□□□□□ -1.64
SSX9-202ENST00000608568 MAPKAP1Q9BPZ7 522 aa4.79□□□□□ -1.64
SSX9-202ENST00000608568 KCNS3Q9BQ31 491 aa4.79□□□□□ -1.64
SSX9-202ENST00000608568 TREX2Q9BQ50 279 aaPredicted RBP4.79□□□□□ -1.64
SSX9-202ENST00000608568 SNRNP25Q9BV90 132 aaKnown RBP4.79□□□□□ -1.64
SSX9-202ENST00000608568 DPCDQ9BVM2 203 aaPredicted RBP4.79□□□□□ -1.64
SSX9-202ENST00000608568 SPATA5L1Q9BVQ7 753 aa4.79□□□□□ -1.64
SSX9-202ENST00000608568 BEX2Q9BXY8 128 aa4.79□□□□□ -1.64
SSX9-202ENST00000608568 ZYG11BQ9C0D3 744 aa4.79□□□□□ -1.64
SSX9-202ENST00000608568 DPAGT1Q9H3H5 408 aa4.79□□□□□ -1.64
SSX9-202ENST00000608568 REEP1Q9H902 201 aa4.79□□□□□ -1.64
SSX9-202ENST00000608568 IL1RL2Q9HB29 575 aa4.79□□□□□ -1.64
SSX9-202ENST00000608568 SEBOXQ9HB31 216 aaPredicted RBP4.79□□□□□ -1.64
SSX9-202ENST00000608568 TCF7L1Q9HCS4 588 aa4.79□□□□□ -1.64
SSX9-202ENST00000608568 SPHK2Q9NRA0 654 aa4.79□□□□□ -1.64
SSX9-202ENST00000608568 EXD2Q9NVH0 621 aa4.79□□□□□ -1.64
SSX9-202ENST00000608568 ASIC5Q9NY37 505 aa4.79□□□□□ -1.64
SSX9-202ENST00000608568 COQ3Q9NZJ6 369 aa4.79□□□□□ -1.64
SSX9-202ENST00000608568 NDUFAF4Q9P032 175 aa4.79□□□□□ -1.64
SSX9-202ENST00000608568 SEC14L3Q9UDX4 400 aa4.79□□□□□ -1.64
SSX9-202ENST00000608568 BTNL2Q9UIR0 455 aa4.79□□□□□ -1.64
SSX9-202ENST00000608568 ING1Q9UK53 422 aaPredicted RBP4.79□□□□□ -1.64
SSX9-202ENST00000608568 RNF112Q9ULX5 631 aa4.79□□□□□ -1.64
SSX9-202ENST00000608568 SCML2Q9UQR0 700 aa4.79□□□□□ -1.64
SSX9-202ENST00000608568 POFUT2Q9Y2G5 429 aa4.79□□□□□ -1.64
SSX9-202ENST00000608568 GSTK1Q9Y2Q3 226 aa4.79□□□□□ -1.64
SSX9-202ENST00000608568 AAR2Q9Y312 384 aaKnown RBP4.79□□□□□ -1.64
SSX9-202ENST00000608568 FLNBO75369 2602 aaKnown RBP4.79□□□□□ -1.64
SSX9-202ENST00000608568 SNRNP200O75643 2136 aaKnown RBP4.78□□□□□ -1.64
SSX9-202ENST00000608568 ZNF462Q96JM2 2506 aa4.78□□□□□ -1.64
SSX9-202ENST00000608568 PRAMEF33A0A0G2JMD5 474 aa4.78□□□□□ -1.64
SSX9-202ENST00000608568 SPAARA0A1B0GVQ0 90 aa4.78□□□□□ -1.64
SSX9-202ENST00000608568 A0A1W2PQL4 384 aaPredicted RBP4.78□□□□□ -1.64
SSX9-202ENST00000608568 RAB19A4D1S5 217 aa4.78□□□□□ -1.64
SSX9-202ENST00000608568 ASPDHA6ND91 283 aa4.78□□□□□ -1.64
SSX9-202ENST00000608568 RHPN2P1A8MT19 583 aa4.78□□□□□ -1.64
SSX9-202ENST00000608568 DFFAO00273 331 aa4.78□□□□□ -1.64
SSX9-202ENST00000608568 UBE2CO00762 179 aa4.78□□□□□ -1.64
SSX9-202ENST00000608568 IMPA2O14732 288 aa4.78□□□□□ -1.64
SSX9-202ENST00000608568 PIP5K1BO14986 540 aa4.78□□□□□ -1.64
SSX9-202ENST00000608568 SUSD5O60279 629 aa4.78□□□□□ -1.64
SSX9-202ENST00000608568 PRAMEF10O60809 474 aa4.78□□□□□ -1.64
SSX9-202ENST00000608568 NIPSNAP2O75323 286 aa4.78□□□□□ -1.64
SSX9-202ENST00000608568 RP2O75695 350 aa4.78□□□□□ -1.64
SSX9-202ENST00000608568 KRT33AO76009 404 aa4.78□□□□□ -1.64
SSX9-202ENST00000608568 ANXA9O76027 345 aa4.78□□□□□ -1.64
SSX9-202ENST00000608568 WISP3O95389 354 aaPredicted RBP4.78□□□□□ -1.64
SSX9-202ENST00000608568 MPC2O95563 127 aa4.78□□□□□ -1.64
SSX9-202ENST00000608568 EPOP01588 193 aa4.78□□□□□ -1.64
SSX9-202ENST00000608568 SEMG1P04279 462 aa4.78□□□□□ -1.64
SSX9-202ENST00000608568 FABP3P05413 133 aa4.78□□□□□ -1.64
SSX9-202ENST00000608568 NMBP08949 121 aa4.78□□□□□ -1.64
SSX9-202ENST00000608568 SLC2A1P11166 492 aa4.78□□□□□ -1.64
SSX9-202ENST00000608568 CYP4B1P13584 511 aa4.78□□□□□ -1.64
SSX9-202ENST00000608568 HOXB2P14652 356 aa4.78□□□□□ -1.64
SSX9-202ENST00000608568 CPN1P15169 458 aa4.78□□□□□ -1.64
SSX9-202ENST00000608568 PFKLP17858 780 aa4.78□□□□□ -1.64
SSX9-202ENST00000608568 PVALBP20472 110 aaPredicted RBP4.78□□□□□ -1.64
SSX9-202ENST00000608568 PSMB4P28070 264 aa4.78□□□□□ -1.64
SSX9-202ENST00000608568 CORO1AP31146 461 aaKnown RBP4.78□□□□□ -1.64
SSX9-202ENST00000608568 FGF9P31371 208 aaPredicted RBP4.78□□□□□ -1.64
SSX9-202ENST00000608568 SLC6A4P31645 630 aa4.78□□□□□ -1.64
SSX9-202ENST00000608568 GKP32189 559 aa4.78□□□□□ -1.64
SSX9-202ENST00000608568 GRK5P34947 590 aa4.78□□□□□ -1.64
SSX9-202ENST00000608568 TGFBR1P36897 503 aa4.78□□□□□ -1.64
SSX9-202ENST00000608568 RPS19P39019 145 aaKnown RBP4.78□□□□□ -1.64
SSX9-202ENST00000608568 PMELP40967 661 aa4.78□□□□□ -1.64
SSX9-202ENST00000608568 CCR10P46092 362 aa4.78□□□□□ -1.64
SSX9-202ENST00000608568 GLRBP48167 497 aa4.78□□□□□ -1.64
SSX9-202ENST00000608568 PIK3CGP48736 1102 aa4.78□□□□□ -1.64
SSX9-202ENST00000608568 EVX1P49640 407 aa4.78□□□□□ -1.64
SSX9-202ENST00000608568 NOVA1P51513 510 aaKnown RBP4.78□□□□□ -1.64
SSX9-202ENST00000608568 CDC42P60953 191 aa4.78□□□□□ -1.64
SSX9-202ENST00000608568 RAP2BP61225 183 aa4.78□□□□□ -1.64
SSX9-202ENST00000608568 MRPS21P82921 87 aaKnown RBP4.78□□□□□ -1.64
SSX9-202ENST00000608568 PRR20EP86478 221 aa4.78□□□□□ -1.64
SSX9-202ENST00000608568 PRR20CP86479 221 aa4.78□□□□□ -1.64
SSX9-202ENST00000608568 PRR20DP86480 221 aa4.78□□□□□ -1.64
SSX9-202ENST00000608568 PRR20BP86481 221 aa4.78□□□□□ -1.64
SSX9-202ENST00000608568 PRR20AP86496 221 aa4.78□□□□□ -1.64
SSX9-202ENST00000608568 TNP2Q05952 138 aa4.78□□□□□ -1.64
SSX9-202ENST00000608568 ST3GAL4Q11206 333 aa4.78□□□□□ -1.64
SSX9-202ENST00000608568 EFEMP1Q12805 493 aa4.78□□□□□ -1.64
SSX9-202ENST00000608568 ERV3-1Q14264 604 aa4.78□□□□□ -1.64
SSX9-202ENST00000608568 PTGR1Q14914 329 aa4.78□□□□□ -1.64
SSX9-202ENST00000608568 TRAM2Q15035 370 aa4.78□□□□□ -1.64
SSX9-202ENST00000608568 FCN2Q15485 313 aa4.78□□□□□ -1.64
SSX9-202ENST00000608568 TAF1AQ15573 450 aaPredicted RBP4.78□□□□□ -1.64
SSX9-202ENST00000608568 SNAPC1Q16533 368 aa4.78□□□□□ -1.64
SSX9-202ENST00000608568 ST3GAL2Q16842 350 aa4.78□□□□□ -1.64
SSX9-202ENST00000608568 MPEG1Q2M385 716 aa4.78□□□□□ -1.64
SSX9-202ENST00000608568 GOLGA7BQ2TAP0 167 aa4.78□□□□□ -1.64
SSX9-202ENST00000608568 UAP1L1Q3KQV9 507 aa4.78□□□□□ -1.64
SSX9-202ENST00000608568 FLYWCH1Q4VC44 716 aa4.78□□□□□ -1.64
SSX9-202ENST00000608568 UNC50Q53HI1 259 aa4.78□□□□□ -1.64
SSX9-202ENST00000608568 C10orf120Q5SQS8 335 aa4.78□□□□□ -1.64
SSX9-202ENST00000608568 AVPI1Q5T686 147 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms