RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 RNASET2O00584 256 aaKnown RBP8.01□□□□□ -1.13
SSBP4-208ENST00000600628 PRRG2O14669 202 aa8.01□□□□□ -1.13
SSBP4-208ENST00000600628 EMC8O43402 210 aa8.01□□□□□ -1.13
SSBP4-208ENST00000600628 ZIC3O60481 467 aa8.01□□□□□ -1.13
SSBP4-208ENST00000600628 CDC40O60508 579 aaKnown RBP eCLIP8.01□□□□□ -1.13
SSBP4-208ENST00000600628 PDE9AO76083 593 aa8.01□□□□□ -1.13
SSBP4-208ENST00000600628 GUSBP08236 651 aa8.01□□□□□ -1.13
SSBP4-208ENST00000600628 ACP2P11117 423 aa8.01□□□□□ -1.13
SSBP4-208ENST00000600628 CYP4B1P13584 511 aa8.01□□□□□ -1.13
SSBP4-208ENST00000600628 LBPP18428 481 aa8.01□□□□□ -1.13
SSBP4-208ENST00000600628 IL12AP29459 219 aa8.01□□□□□ -1.13
SSBP4-208ENST00000600628 LCN1P31025 176 aa8.01□□□□□ -1.13
SSBP4-208ENST00000600628 HPCAL1P37235 193 aa8.01□□□□□ -1.13
SSBP4-208ENST00000600628 GFRA1P56159 465 aa8.01□□□□□ -1.13
SSBP4-208ENST00000600628 HBA1P69905 142 aa8.01□□□□□ -1.13
SSBP4-208ENST00000600628 RPP38P78345 283 aaKnown RBP8.01□□□□□ -1.13
SSBP4-208ENST00000600628 PLGLB1Q02325 96 aa8.01□□□□□ -1.13
SSBP4-208ENST00000600628 CRYZQ08257 329 aaKnown RBP8.01□□□□□ -1.13
SSBP4-208ENST00000600628 HSPB3Q12988 150 aa8.01□□□□□ -1.13
SSBP4-208ENST00000600628 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.01□□□□□ -1.13
SSBP4-208ENST00000600628 DPY19L1Q2PZI1 675 aa8.01□□□□□ -1.13
SSBP4-208ENST00000600628 TMEM44Q2T9K0 475 aa8.01□□□□□ -1.13
SSBP4-208ENST00000600628 GXYLT1Q4G148 440 aa8.01□□□□□ -1.13
SSBP4-208ENST00000600628 CPTPQ5TA50 214 aa8.01□□□□□ -1.13
SSBP4-208ENST00000600628 ATG16L1Q676U5 607 aa8.01□□□□□ -1.13
SSBP4-208ENST00000600628 VASNQ6EMK4 673 aa8.01□□□□□ -1.13
SSBP4-208ENST00000600628 XKRXQ6PP77 449 aa8.01□□□□□ -1.13
SSBP4-208ENST00000600628 PAOXQ6QHF9 649 aa8.01□□□□□ -1.13
SSBP4-208ENST00000600628 HDXQ7Z353 690 aa8.01□□□□□ -1.13
SSBP4-208ENST00000600628 CD163Q86VB7 1156 aa8.01□□□□□ -1.13
SSBP4-208ENST00000600628 PACS2Q86VP3 889 aa8.01□□□□□ -1.13
SSBP4-208ENST00000600628 TRIM42Q8IWZ5 723 aa8.01□□□□□ -1.13
SSBP4-208ENST00000600628 ZNF808Q8N4W9 903 aaPredicted RBP8.01□□□□□ -1.13
SSBP4-208ENST00000600628 OR5M3Q8NGP4 307 aa8.01□□□□□ -1.13
SSBP4-208ENST00000600628 CEP70Q8NHQ1 597 aa8.01□□□□□ -1.13
SSBP4-208ENST00000600628 ZFP28Q8NHY6 868 aa8.01□□□□□ -1.13
SSBP4-208ENST00000600628 PPP1R14CQ8TAE6 165 aa8.01□□□□□ -1.13
SSBP4-208ENST00000600628 PIWIL2Q8TC59 973 aaKnown RBP8.01□□□□□ -1.13
SSBP4-208ENST00000600628 MIPOL1Q8TD10 442 aa8.01□□□□□ -1.13
SSBP4-208ENST00000600628 STON2Q8WXE9 905 aa8.01□□□□□ -1.13
SSBP4-208ENST00000600628 TMCO6Q96DC7 493 aa8.01□□□□□ -1.13
SSBP4-208ENST00000600628 C7orf26Q96N11 449 aa8.01□□□□□ -1.13
SSBP4-208ENST00000600628 MS4A4EQ96PG1 132 aa8.01□□□□□ -1.13
SSBP4-208ENST00000600628 ADOQ96SZ5 270 aa8.01□□□□□ -1.13
SSBP4-208ENST00000600628 STACQ99469 402 aa8.01□□□□□ -1.13
SSBP4-208ENST00000600628 DUSP26Q9BV47 211 aa8.01□□□□□ -1.13
SSBP4-208ENST00000600628 OSBPL11Q9BXB4 747 aa8.01□□□□□ -1.13
SSBP4-208ENST00000600628 OR2B2Q9GZK3 357 aa8.01□□□□□ -1.13
SSBP4-208ENST00000600628 PRDM14Q9GZV8 571 aa8.01□□□□□ -1.13
SSBP4-208ENST00000600628 SERHL2Q9H4I8 314 aa8.01□□□□□ -1.13
SSBP4-208ENST00000600628 NEUROD4Q9HD90 331 aa8.01□□□□□ -1.13
SSBP4-208ENST00000600628 ATAD3AQ9NVI7 634 aa8.01□□□□□ -1.13
SSBP4-208ENST00000600628 AIG1Q9NVV5 245 aa8.01□□□□□ -1.13
SSBP4-208ENST00000600628 ZNF446Q9NWS9 450 aa8.01□□□□□ -1.13
SSBP4-208ENST00000600628 FAM120CQ9NX05 1096 aaKnown RBP8.01□□□□□ -1.13
SSBP4-208ENST00000600628 FLRT3Q9NZU0 649 aa8.01□□□□□ -1.13
SSBP4-208ENST00000600628 SH3BP4Q9P0V3 963 aa8.01□□□□□ -1.13
SSBP4-208ENST00000600628 EIF3LQ9Y262 564 aaKnown RBP8.01□□□□□ -1.13
SSBP4-208ENST00000600628 KLF2Q9Y5W3 355 aaPredicted RBP8.01□□□□□ -1.13
SSBP4-208ENST00000600628 WIF1Q9Y5W5 379 aa8.01□□□□□ -1.13
SSBP4-208ENST00000600628 OTOGQ6ZRI0 2925 aa8□□□□□ -1.13
SSBP4-208ENST00000600628 TRGV5A0A0B4J1U4 118 aa8□□□□□ -1.13
SSBP4-208ENST00000600628 PRSS51A0A1B0GVH4 220 aa8□□□□□ -1.13
SSBP4-208ENST00000600628 A0A1W2PRB8 838 aa8□□□□□ -1.13
SSBP4-208ENST00000600628 GXYLT2A0PJZ3 443 aa8□□□□□ -1.13
SSBP4-208ENST00000600628 HMGB1P1B2RPK0 211 aaPredicted RBP8□□□□□ -1.13
SSBP4-208ENST00000600628 ALG1L2C9J202 215 aa8□□□□□ -1.13
SSBP4-208ENST00000600628 BCKDKO14874 412 aa8□□□□□ -1.13
SSBP4-208ENST00000600628 REM1O75628 298 aa8□□□□□ -1.13
SSBP4-208ENST00000600628 CBR3O75828 277 aa8□□□□□ -1.13
SSBP4-208ENST00000600628 SOX30O94993 753 aa8□□□□□ -1.13
SSBP4-208ENST00000600628 KCNK2O95069 426 aa8□□□□□ -1.13
SSBP4-208ENST00000600628 HMGN2P05204 90 aaKnown RBP8□□□□□ -1.13
SSBP4-208ENST00000600628 HOXD4P09016 255 aaPredicted RBP8□□□□□ -1.13
SSBP4-208ENST00000600628 DDX5P17844 614 aaKnown RBP8□□□□□ -1.13
SSBP4-208ENST00000600628 TBXA2RP21731 343 aa8□□□□□ -1.13
SSBP4-208ENST00000600628 EVI2BP34910 448 aa8□□□□□ -1.13
SSBP4-208ENST00000600628 DCTP40126 519 aa8□□□□□ -1.13
SSBP4-208ENST00000600628 SMSP52788 366 aa8□□□□□ -1.13
SSBP4-208ENST00000600628 B3GALT5-AS1P59052 145 aa8□□□□□ -1.13
SSBP4-208ENST00000600628 MRPS22P82650 360 aaKnown RBP8□□□□□ -1.13
SSBP4-208ENST00000600628 PRR5P85299 388 aa8□□□□□ -1.13
SSBP4-208ENST00000600628 TFF3Q07654 80 aa8□□□□□ -1.13
SSBP4-208ENST00000600628 ZNF155Q12901 538 aaPredicted RBP8□□□□□ -1.13
SSBP4-208ENST00000600628 DUSP5Q16690 384 aa8□□□□□ -1.13
SSBP4-208ENST00000600628 DECR1Q16698 335 aa8□□□□□ -1.13
SSBP4-208ENST00000600628 TMEM198Q66K66 360 aa8□□□□□ -1.13
SSBP4-208ENST00000600628 SP5Q6BEB4 398 aaPredicted RBP8□□□□□ -1.13
SSBP4-208ENST00000600628 ZNF787Q6DD87 383 aa8□□□□□ -1.13
SSBP4-208ENST00000600628 CDC73Q6P1J9 531 aa8□□□□□ -1.13
SSBP4-208ENST00000600628 EPGNQ6UW88 154 aa8□□□□□ -1.13
SSBP4-208ENST00000600628 SPATA19Q7Z5L4 167 aa8□□□□□ -1.13
SSBP4-208ENST00000600628 WDR53Q7Z5U6 358 aaPredicted RBP8□□□□□ -1.13
SSBP4-208ENST00000600628 ZAR1Q86SH2 424 aa8□□□□□ -1.13
SSBP4-208ENST00000600628 PLCZ1Q86YW0 608 aa8□□□□□ -1.13
SSBP4-208ENST00000600628 RPRMLQ8N4K4 120 aa8□□□□□ -1.13
SSBP4-208ENST00000600628 FAM83FQ8NEG4 500 aaPredicted RBP8□□□□□ -1.13
SSBP4-208ENST00000600628 NUP43Q8NFH3 380 aa8□□□□□ -1.13
SSBP4-208ENST00000600628 EFHD2Q96C19 240 aaPredicted RBP8□□□□□ -1.13
SSBP4-208ENST00000600628 C16orf58Q96GQ5 468 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms