RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 FADS6Q8N9I5 356 aa14.34□□□□□ -0.11
VRK3-221ENST00000600284 BANPQ8N9N5 519 aa14.34□□□□□ -0.11
VRK3-221ENST00000600284 C9orf106Q8NAJ2 232 aa14.34□□□□□ -0.11
VRK3-221ENST00000600284 APOPT1Q96IL0 206 aa14.34□□□□□ -0.11
VRK3-221ENST00000600284 SFXN2Q96NB2 322 aa14.34□□□□□ -0.11
VRK3-221ENST00000600284 SFXN3Q9BWM7 321 aa14.34□□□□□ -0.11
VRK3-221ENST00000600284 ANKZF1Q9H8Y5 726 aa14.34□□□□□ -0.11
VRK3-221ENST00000600284 C3orf14Q9HBI5 128 aa14.34□□□□□ -0.11
VRK3-221ENST00000600284 DNAJB12Q9NXW2 375 aaKnown RBP14.34□□□□□ -0.11
VRK3-221ENST00000600284 CRIM1Q9NZV1 1036 aa14.34□□□□□ -0.11
VRK3-221ENST00000600284 PPP4R1LQ9P1A2 415 aa14.34□□□□□ -0.11
VRK3-221ENST00000600284 DKKL1Q9UK85 242 aa14.34□□□□□ -0.11
VRK3-221ENST00000600284 TLDC2A0PJX2 215 aa14.33□□□□□ -0.12
VRK3-221ENST00000600284 LINC01387J3KSC0 135 aa14.33□□□□□ -0.12
VRK3-221ENST00000600284 PDPK1O15530 556 aa14.33□□□□□ -0.12
VRK3-221ENST00000600284 NPHS1O60500 1241 aa14.33□□□□□ -0.12
VRK3-221ENST00000600284 IL33O95760 270 aa14.33□□□□□ -0.12
VRK3-221ENST00000600284 TMIGD3P0DMS9 266 aaPredicted RBP14.33□□□□□ -0.12
VRK3-221ENST00000600284 ZNF708P17019 499 aa14.33□□□□□ -0.12
VRK3-221ENST00000600284 TACR1P25103 407 aa14.33□□□□□ -0.12
VRK3-221ENST00000600284 DGKQP52824 942 aa14.33□□□□□ -0.12
VRK3-221ENST00000600284 SORDQ00796 357 aa14.33□□□□□ -0.12
VRK3-221ENST00000600284 SRYQ05066 204 aa14.33□□□□□ -0.12
VRK3-221ENST00000600284 GANABQ14697 944 aaKnown RBP14.33□□□□□ -0.12
VRK3-221ENST00000600284 DAZAP2Q15038 168 aaPredicted RBP14.33□□□□□ -0.12
VRK3-221ENST00000600284 FLYWCH1Q4VC44 716 aa14.33□□□□□ -0.12
VRK3-221ENST00000600284 SH2D4BQ5SQS7 431 aa14.33□□□□□ -0.12
VRK3-221ENST00000600284 KANK2Q63ZY3 851 aa14.33□□□□□ -0.12
VRK3-221ENST00000600284 OR5M10Q6IEU7 315 aa14.33□□□□□ -0.12
VRK3-221ENST00000600284 TRABD2AQ86V40 505 aa14.33□□□□□ -0.12
VRK3-221ENST00000600284 ZZZ3Q8IYH5 903 aa14.33□□□□□ -0.12
VRK3-221ENST00000600284 OR4K17Q8NGC6 315 aa14.33□□□□□ -0.12
VRK3-221ENST00000600284 CEP70Q8NHQ1 597 aa14.33□□□□□ -0.12
VRK3-221ENST00000600284 ZFP28Q8NHY6 868 aa14.33□□□□□ -0.12
VRK3-221ENST00000600284 HOXB13Q92826 284 aaPredicted RBP14.33□□□□□ -0.12
VRK3-221ENST00000600284 NINJ1Q92982 152 aa14.33□□□□□ -0.12
VRK3-221ENST00000600284 ZBED6CLQ96FA7 236 aaPredicted RBP14.33□□□□□ -0.12
VRK3-221ENST00000600284 ROPN1BQ9BZX4 212 aaPredicted RBP14.33□□□□□ -0.12
VRK3-221ENST00000600284 TUBB1Q9H4B7 451 aa14.33□□□□□ -0.12
VRK3-221ENST00000600284 REEP4Q9H6H4 257 aa14.33□□□□□ -0.12
VRK3-221ENST00000600284 ROPN1Q9HAT0 212 aaPredicted RBP14.33□□□□□ -0.12
VRK3-221ENST00000600284 EML4Q9HC35 981 aaKnown RBP14.33□□□□□ -0.12
VRK3-221ENST00000600284 HHATLQ9HCP6 504 aa14.33□□□□□ -0.12
VRK3-221ENST00000600284 RASSF1Q9NS23 344 aa14.33□□□□□ -0.12
VRK3-221ENST00000600284 FAM120CQ9NX05 1096 aaKnown RBP14.33□□□□□ -0.12
VRK3-221ENST00000600284 EDARQ9UNE0 448 aa14.33□□□□□ -0.12
VRK3-221ENST00000600284 DNAJC15Q9Y5T4 150 aa14.33□□□□□ -0.12
VRK3-221ENST00000600284 CLCA1A8K7I4 914 aa14.32□□□□□ -0.12
VRK3-221ENST00000600284 LSM1O15116 133 aaKnown RBP14.32□□□□□ -0.12
VRK3-221ENST00000600284 PRPS2P11908 318 aa14.32□□□□□ -0.12
VRK3-221ENST00000600284 PEPDP12955 493 aa14.32□□□□□ -0.12
VRK3-221ENST00000600284 CD1EP15812 388 aa14.32□□□□□ -0.12
VRK3-221ENST00000600284 DDX5P17844 614 aaKnown RBP14.32□□□□□ -0.12
VRK3-221ENST00000600284 DNAJA1P31689 397 aaKnown RBP14.32□□□□□ -0.12
VRK3-221ENST00000600284 FRKP42685 505 aaPredicted RBP14.32□□□□□ -0.12
VRK3-221ENST00000600284 ASMTP46597 345 aa14.32□□□□□ -0.12
VRK3-221ENST00000600284 STARP49675 285 aa14.32□□□□□ -0.12
VRK3-221ENST00000600284 CLDN18P56856 261 aa14.32□□□□□ -0.12
VRK3-221ENST00000600284 GLYR1Q49A26 553 aaPredicted RBP14.32□□□□□ -0.12
VRK3-221ENST00000600284 VPS26BQ4G0F5 336 aa14.32□□□□□ -0.12
VRK3-221ENST00000600284 OR2T11Q8NH01 316 aa14.32□□□□□ -0.12
VRK3-221ENST00000600284 GOT1L1Q8NHS2 421 aaPredicted RBP14.32□□□□□ -0.12
VRK3-221ENST00000600284 PPCDCQ96CD2 204 aa14.32□□□□□ -0.12
VRK3-221ENST00000600284 MTERF3Q96E29 417 aa14.32□□□□□ -0.12
VRK3-221ENST00000600284 G6PC3Q9BUM1 346 aa14.32□□□□□ -0.12
VRK3-221ENST00000600284 POLDIP3Q9BY77 421 aaKnown RBP14.32□□□□□ -0.12
VRK3-221ENST00000600284 PIGMQ9H3S5 423 aa14.32□□□□□ -0.12
VRK3-221ENST00000600284 DSN1Q9H410 356 aa14.32□□□□□ -0.12
VRK3-221ENST00000600284 PTGES2Q9H7Z7 377 aa14.32□□□□□ -0.12
VRK3-221ENST00000600284 ACSS1Q9NUB1 689 aaPredicted RBP14.32□□□□□ -0.12
VRK3-221ENST00000600284 NTMQ9P121 344 aa14.32□□□□□ -0.12
VRK3-221ENST00000600284 CLCF1Q9UBD9 225 aa14.32□□□□□ -0.12
VRK3-221ENST00000600284 LGALS13Q9UHV8 139 aa14.32□□□□□ -0.12
VRK3-221ENST00000600284 TRAF6Q9Y4K3 522 aa14.32□□□□□ -0.12
VRK3-221ENST00000600284 PTGDR2Q9Y5Y4 395 aa14.32□□□□□ -0.12
VRK3-221ENST00000600284 ANKRD17O75179 2603 aaKnown RBP14.31□□□□□ -0.12
VRK3-221ENST00000600284 TUBAL3A6NHL2 446 aa14.31□□□□□ -0.12
VRK3-221ENST00000600284 A6NNC1 897 aa14.31□□□□□ -0.12
VRK3-221ENST00000600284 B4DXG7 233 aa14.31□□□□□ -0.12
VRK3-221ENST00000600284 HCRTR2O43614 444 aa14.31□□□□□ -0.12
VRK3-221ENST00000600284 SCO2O43819 266 aa14.31□□□□□ -0.12
VRK3-221ENST00000600284 GOSR1O95249 250 aa14.31□□□□□ -0.12
VRK3-221ENST00000600284 KCNH1O95259 989 aa14.31□□□□□ -0.12
VRK3-221ENST00000600284 CRHP06850 196 aa14.31□□□□□ -0.12
VRK3-221ENST00000600284 LINC00032P0C843 101 aa14.31□□□□□ -0.12
VRK3-221ENST00000600284 SDC1P18827 310 aa14.31□□□□□ -0.12
VRK3-221ENST00000600284 ALDH3A1P30838 453 aa14.31□□□□□ -0.12
VRK3-221ENST00000600284 SERPINB5P36952 375 aa14.31□□□□□ -0.12
VRK3-221ENST00000600284 MAP3K8P41279 467 aa14.31□□□□□ -0.12
VRK3-221ENST00000600284 MANFP55145 182 aaKnown RBP14.31□□□□□ -0.12
VRK3-221ENST00000600284 EEFSECP57772 596 aaKnown RBP14.31□□□□□ -0.12
VRK3-221ENST00000600284 B3GALT5-AS1P59052 145 aa14.31□□□□□ -0.12
VRK3-221ENST00000600284 C17orf67Q0P5P2 114 aa14.31□□□□□ -0.12
VRK3-221ENST00000600284 HSPB3Q12988 150 aa14.31□□□□□ -0.12
VRK3-221ENST00000600284 SNTB1Q13884 538 aaKnown RBP14.31□□□□□ -0.12
VRK3-221ENST00000600284 PDE7AQ13946 482 aa14.31□□□□□ -0.12
VRK3-221ENST00000600284 UGT3A2Q3SY77 523 aa14.31□□□□□ -0.12
VRK3-221ENST00000600284 RFTN2Q52LD8 501 aaPredicted RBP14.31□□□□□ -0.12
VRK3-221ENST00000600284 LRIG3Q6UXM1 1119 aa14.31□□□□□ -0.12
VRK3-221ENST00000600284 ZNF551Q7Z340 670 aaPredicted RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms