RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 OR14I1A6ND48 311 aa10.02□□□□□ -0.81
SHKBP1-206ENST00000595523 ZNF195O14628 629 aa10.02□□□□□ -0.81
SHKBP1-206ENST00000595523 KLF11O14901 512 aa10.02□□□□□ -0.81
SHKBP1-206ENST00000595523 HDAC3O15379 428 aa10.02□□□□□ -0.81
SHKBP1-206ENST00000595523 EMC8O43402 210 aa10.02□□□□□ -0.81
SHKBP1-206ENST00000595523 FADS1O60427 444 aa10.02□□□□□ -0.81
SHKBP1-206ENST00000595523 SCN2BO60939 215 aa10.02□□□□□ -0.81
SHKBP1-206ENST00000595523 NKX2-2O95096 273 aa10.02□□□□□ -0.81
SHKBP1-206ENST00000595523 IL33O95760 270 aa10.02□□□□□ -0.81
SHKBP1-206ENST00000595523 C6orf47O95873 294 aa10.02□□□□□ -0.81
SHKBP1-206ENST00000595523 KITP10721 976 aa10.02□□□□□ -0.81
SHKBP1-206ENST00000595523 LBPP18428 481 aa10.02□□□□□ -0.81
SHKBP1-206ENST00000595523 ELAVL4P26378 380 aaKnown RBP10.02□□□□□ -0.81
SHKBP1-206ENST00000595523 EPHA3P29320 983 aa10.02□□□□□ -0.81
SHKBP1-206ENST00000595523 GABRA3P34903 492 aa10.02□□□□□ -0.81
SHKBP1-206ENST00000595523 EVI2BP34910 448 aa10.02□□□□□ -0.81
SHKBP1-206ENST00000595523 MASP1P48740 699 aa10.02□□□□□ -0.81
SHKBP1-206ENST00000595523 PRKAG1P54619 331 aa10.02□□□□□ -0.81
SHKBP1-206ENST00000595523 PHC1P78364 1004 aa10.02□□□□□ -0.81
SHKBP1-206ENST00000595523 MRPS22P82650 360 aaKnown RBP10.02□□□□□ -0.81
SHKBP1-206ENST00000595523 DUSP5Q16690 384 aa10.02□□□□□ -0.81
SHKBP1-206ENST00000595523 GXYLT1Q4G148 440 aa10.02□□□□□ -0.81
SHKBP1-206ENST00000595523 EIPR1Q53HC9 387 aa10.02□□□□□ -0.81
SHKBP1-206ENST00000595523 ATG16L1Q676U5 607 aa10.02□□□□□ -0.81
SHKBP1-206ENST00000595523 RTL6Q6ICC9 239 aa10.02□□□□□ -0.81
SHKBP1-206ENST00000595523 MTFR2Q6P444 385 aa10.02□□□□□ -0.81
SHKBP1-206ENST00000595523 RPTNQ6XPR3 784 aa10.02□□□□□ -0.81
SHKBP1-206ENST00000595523 HDXQ7Z353 690 aa10.02□□□□□ -0.81
SHKBP1-206ENST00000595523 ZAR1Q86SH2 424 aa10.02□□□□□ -0.81
SHKBP1-206ENST00000595523 MRGPRGQ86SM5 289 aa10.02□□□□□ -0.81
SHKBP1-206ENST00000595523 ZNF808Q8N4W9 903 aaPredicted RBP10.02□□□□□ -0.81
SHKBP1-206ENST00000595523 SLC16A11Q8NCK7 471 aa10.02□□□□□ -0.81
SHKBP1-206ENST00000595523 OR5M9Q8NGP3 310 aa10.02□□□□□ -0.81
SHKBP1-206ENST00000595523 OR1J4Q8NGS1 313 aa10.02□□□□□ -0.81
SHKBP1-206ENST00000595523 NEIL3Q8TAT5 605 aa10.02□□□□□ -0.81
SHKBP1-206ENST00000595523 PHF10Q8WUB8 498 aaKnown RBP10.02□□□□□ -0.81
SHKBP1-206ENST00000595523 OR5P2Q8WZ92 322 aa10.02□□□□□ -0.81
SHKBP1-206ENST00000595523 ZNF75CPQ92670 426 aaPredicted RBP10.02□□□□□ -0.81
SHKBP1-206ENST00000595523 TMCO6Q96DC7 493 aa10.02□□□□□ -0.81
SHKBP1-206ENST00000595523 OTUB1Q96FW1 271 aaPredicted RBP10.02□□□□□ -0.81
SHKBP1-206ENST00000595523 C16orf58Q96GQ5 468 aa10.02□□□□□ -0.81
SHKBP1-206ENST00000595523 MAELQ96JY0 434 aaKnown RBP10.02□□□□□ -0.81
SHKBP1-206ENST00000595523 TEX37Q96LM6 180 aa10.02□□□□□ -0.81
SHKBP1-206ENST00000595523 DUSP26Q9BV47 211 aa10.02□□□□□ -0.81
SHKBP1-206ENST00000595523 BHLHE41Q9C0J9 482 aaPredicted RBP10.02□□□□□ -0.81
SHKBP1-206ENST00000595523 TP63Q9H3D4 680 aaPredicted RBP10.02□□□□□ -0.81
SHKBP1-206ENST00000595523 LDAHQ9H6V9 325 aa10.02□□□□□ -0.81
SHKBP1-206ENST00000595523 WDR55Q9H6Y2 383 aaPredicted RBP10.02□□□□□ -0.81
SHKBP1-206ENST00000595523 VIPAS39Q9H9C1 493 aa10.02□□□□□ -0.81
SHKBP1-206ENST00000595523 Q9N2J8 555 aa10.02□□□□□ -0.81
SHKBP1-206ENST00000595523 SERHLQ9NQF3 203 aa10.02□□□□□ -0.81
SHKBP1-206ENST00000595523 ZCCHC3Q9NUD5 404 aaKnown RBP10.02□□□□□ -0.81
SHKBP1-206ENST00000595523 ATAD3AQ9NVI7 634 aa10.02□□□□□ -0.81
SHKBP1-206ENST00000595523 FBXL2Q9UKC9 423 aa10.02□□□□□ -0.81
SHKBP1-206ENST00000595523 FAM215AQ9Y5M1 114 aa10.02□□□□□ -0.81
SHKBP1-206ENST00000595523 ANKHD1Q8IWZ3 2542 aaKnown RBP10.01□□□□□ -0.81
SHKBP1-206ENST00000595523 CSMD1Q96PZ7 3565 aa10.01□□□□□ -0.81
SHKBP1-206ENST00000595523 GOLGA8QA0A0J9YX86 632 aa10.01□□□□□ -0.81
SHKBP1-206ENST00000595523 GOLGA8OA6NCC3 632 aa10.01□□□□□ -0.81
SHKBP1-206ENST00000595523 TTC36A6NLP5 189 aa10.01□□□□□ -0.81
SHKBP1-206ENST00000595523 GOLGA8NF8WBI6 632 aa10.01□□□□□ -0.81
SHKBP1-206ENST00000595523 BCKDKO14874 412 aa10.01□□□□□ -0.81
SHKBP1-206ENST00000595523 HMGN2P05204 90 aaKnown RBP10.01□□□□□ -0.81
SHKBP1-206ENST00000595523 ESRRAP11474 423 aaPredicted RBP10.01□□□□□ -0.81
SHKBP1-206ENST00000595523 KRT20P35900 424 aa10.01□□□□□ -0.81
SHKBP1-206ENST00000595523 HBA1P69905 142 aa10.01□□□□□ -0.81
SHKBP1-206ENST00000595523 CRYZQ08257 329 aaKnown RBP10.01□□□□□ -0.81
SHKBP1-206ENST00000595523 ZNHIT3Q15649 155 aaPredicted RBP10.01□□□□□ -0.81
SHKBP1-206ENST00000595523 DECR1Q16698 335 aa10.01□□□□□ -0.81
SHKBP1-206ENST00000595523 PGS1Q32NB8 556 aa10.01□□□□□ -0.81
SHKBP1-206ENST00000595523 DCST1Q5T197 706 aa10.01□□□□□ -0.81
SHKBP1-206ENST00000595523 OR5M10Q6IEU7 315 aa10.01□□□□□ -0.81
SHKBP1-206ENST00000595523 OR4F3Q6IEY1 312 aa10.01□□□□□ -0.81
SHKBP1-206ENST00000595523 SZRD1Q7Z422 152 aa10.01□□□□□ -0.81
SHKBP1-206ENST00000595523 GALNT10Q86SR1 603 aa10.01□□□□□ -0.81
SHKBP1-206ENST00000595523 TRIM42Q8IWZ5 723 aa10.01□□□□□ -0.81
SHKBP1-206ENST00000595523 CLECL1Q8IZS7 167 aa10.01□□□□□ -0.81
SHKBP1-206ENST00000595523 CDRT4Q8N9R6 151 aa10.01□□□□□ -0.81
SHKBP1-206ENST00000595523 FAM83FQ8NEG4 500 aaPredicted RBP10.01□□□□□ -0.81
SHKBP1-206ENST00000595523 OR8J2Q8NGG1 315 aa10.01□□□□□ -0.81
SHKBP1-206ENST00000595523 CEP70Q8NHQ1 597 aa10.01□□□□□ -0.81
SHKBP1-206ENST00000595523 FAM110BQ8TC76 370 aa10.01□□□□□ -0.81
SHKBP1-206ENST00000595523 GPR151Q8TDV0 419 aa10.01□□□□□ -0.81
SHKBP1-206ENST00000595523 SLC9A6Q92581 669 aa10.01□□□□□ -0.81
SHKBP1-206ENST00000595523 TESCQ96BS2 214 aa10.01□□□□□ -0.81
SHKBP1-206ENST00000595523 RMND5BQ96G75 393 aaPredicted RBP10.01□□□□□ -0.81
SHKBP1-206ENST00000595523 YIPF4Q9BSR8 244 aa10.01□□□□□ -0.81
SHKBP1-206ENST00000595523 C3orf14Q9HBI5 128 aa10.01□□□□□ -0.81
SHKBP1-206ENST00000595523 AIG1Q9NVV5 245 aa10.01□□□□□ -0.81
SHKBP1-206ENST00000595523 GPATCH2Q9NW75 528 aa10.01□□□□□ -0.81
SHKBP1-206ENST00000595523 ARGLU1Q9NWB6 273 aaPredicted RBP10.01□□□□□ -0.81
SHKBP1-206ENST00000595523 FBXO34Q9NWN3 711 aa10.01□□□□□ -0.81
SHKBP1-206ENST00000595523 SLC6A5Q9Y345 797 aa10.01□□□□□ -0.81
SHKBP1-206ENST00000595523 POLQO75417 2590 aa10.01□□□□□ -0.81
SHKBP1-206ENST00000595523 HRNRQ86YZ3 2850 aaPredicted RBP10□□□□□ -0.81
SHKBP1-206ENST00000595523 KDM4EB2RXH2 506 aaPredicted RBP10□□□□□ -0.81
SHKBP1-206ENST00000595523 C9JVG2 144 aa10□□□□□ -0.81
SHKBP1-206ENST00000595523 RNASET2O00584 256 aaKnown RBP10□□□□□ -0.81
SHKBP1-206ENST00000595523 SCO2O43819 266 aa10□□□□□ -0.81
SHKBP1-206ENST00000595523 TRAPPC6AO75865 159 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms