RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 ACSM2BQ68CK6 577 aa14.28□□□□□ -0.12
CIRBP-228ENST00000590347 TMUB2Q71RG4 321 aa14.28□□□□□ -0.12
CIRBP-228ENST00000590347 SERPINA9Q86WD7 417 aa14.28□□□□□ -0.12
CIRBP-228ENST00000590347 LDLRAD3Q86YD5 345 aa14.28□□□□□ -0.12
CIRBP-228ENST00000590347 MEIOBQ8N635 442 aa14.28□□□□□ -0.12
CIRBP-228ENST00000590347 BBS1Q8NFJ9 593 aa14.28□□□□□ -0.12
CIRBP-228ENST00000590347 PDXPQ96GD0 296 aa14.28□□□□□ -0.12
CIRBP-228ENST00000590347 FZD3Q9NPG1 666 aa14.28□□□□□ -0.12
CIRBP-228ENST00000590347 PRMT8Q9NR22 394 aaPredicted RBP14.28□□□□□ -0.12
CIRBP-228ENST00000590347 SYNDIG1LA6NDD5 238 aa14.28□□□□□ -0.12
CIRBP-228ENST00000590347 MANSC4A6NHS7 340 aaPredicted RBP14.28□□□□□ -0.12
CIRBP-228ENST00000590347 LRRC72A6NJI9 287 aa14.28□□□□□ -0.12
CIRBP-228ENST00000590347 EPHX1P07099 455 aa14.28□□□□□ -0.12
CIRBP-228ENST00000590347 SRPRAP08240 638 aaKnown RBP14.28□□□□□ -0.12
CIRBP-228ENST00000590347 PCGF2P35227 344 aa14.28□□□□□ -0.12
CIRBP-228ENST00000590347 RPIAP49247 311 aa14.28□□□□□ -0.12
CIRBP-228ENST00000590347 CHIT1Q13231 466 aa14.28□□□□□ -0.12
CIRBP-228ENST00000590347 DCST1Q5T197 706 aa14.28□□□□□ -0.12
CIRBP-228ENST00000590347 SLC27A4Q6P1M0 643 aa14.28□□□□□ -0.12
CIRBP-228ENST00000590347 ARL9Q6T311 187 aa14.28□□□□□ -0.12
CIRBP-228ENST00000590347 NPAS3Q8IXF0 933 aa14.28□□□□□ -0.12
CIRBP-228ENST00000590347 LNX2Q8N448 690 aa14.28□□□□□ -0.12
CIRBP-228ENST00000590347 TMEM185AQ8NFB2 350 aa14.28□□□□□ -0.12
CIRBP-228ENST00000590347 PIPOXQ9P0Z9 390 aa14.28□□□□□ -0.12
CIRBP-228ENST00000590347 BTNL2Q9UIR0 455 aa14.28□□□□□ -0.12
CIRBP-228ENST00000590347 PLSCR5A0PG75 271 aa14.27□□□□□ -0.12
CIRBP-228ENST00000590347 ARL5CA6NH57 179 aa14.27□□□□□ -0.12
CIRBP-228ENST00000590347 ARHGEF33A8MVX0 844 aa14.27□□□□□ -0.12
CIRBP-228ENST00000590347 SOX30O94993 753 aa14.27□□□□□ -0.12
CIRBP-228ENST00000590347 CRYBA1P05813 215 aa14.27□□□□□ -0.12
CIRBP-228ENST00000590347 ANXA4P09525 319 aaPredicted RBP14.27□□□□□ -0.12
CIRBP-228ENST00000590347 CAPZA1P52907 286 aa14.27□□□□□ -0.12
CIRBP-228ENST00000590347 MRPS6P82932 125 aaKnown RBP14.27□□□□□ -0.12
CIRBP-228ENST00000590347 C12orf45Q8N5I9 185 aaPredicted RBP14.27□□□□□ -0.12
CIRBP-228ENST00000590347 PHOSPHO1Q8TCT1 267 aa14.27□□□□□ -0.12
CIRBP-228ENST00000590347 SLC7A13Q8TCU3 470 aa14.27□□□□□ -0.12
CIRBP-228ENST00000590347 EID2BQ96D98 161 aa14.27□□□□□ -0.12
CIRBP-228ENST00000590347 ZNF285Q96NJ3 590 aa14.27□□□□□ -0.12
CIRBP-228ENST00000590347 C7orf50Q9BRJ6 194 aaKnown RBP14.27□□□□□ -0.12
CIRBP-228ENST00000590347 BIN3Q9NQY0 253 aa14.27□□□□□ -0.12
CIRBP-228ENST00000590347 SPTBP11277 2137 aa14.27□□□□□ -0.13
CIRBP-228ENST00000590347 LRIT2A6NDA9 550 aa14.27□□□□□ -0.13
CIRBP-228ENST00000590347 SULT1C2O00338 296 aa14.27□□□□□ -0.13
CIRBP-228ENST00000590347 YKT6O15498 198 aa14.27□□□□□ -0.13
CIRBP-228ENST00000590347 NARSO43776 548 aaKnown RBP14.27□□□□□ -0.13
CIRBP-228ENST00000590347 THP07101 528 aa14.27□□□□□ -0.13
CIRBP-228ENST00000590347 ADH7P40394 386 aa14.27□□□□□ -0.13
CIRBP-228ENST00000590347 WDR5P61964 334 aaKnown RBP14.27□□□□□ -0.13
CIRBP-228ENST00000590347 SLC3A1Q07837 685 aa14.27□□□□□ -0.13
CIRBP-228ENST00000590347 ZNF770Q6IQ21 691 aaPredicted RBP14.27□□□□□ -0.13
CIRBP-228ENST00000590347 C5orf46Q6UWT4 87 aa14.27□□□□□ -0.13
CIRBP-228ENST00000590347 TOP6BLQ8N6T0 577 aa14.27□□□□□ -0.13
CIRBP-228ENST00000590347 L3MBTL4Q8NA19 623 aa14.27□□□□□ -0.13
CIRBP-228ENST00000590347 OR4D11Q8NGI4 311 aa14.27□□□□□ -0.13
CIRBP-228ENST00000590347 OR5M3Q8NGP4 307 aa14.27□□□□□ -0.13
CIRBP-228ENST00000590347 SCARB1Q8WTV0 552 aa14.27□□□□□ -0.13
CIRBP-228ENST00000590347 EDARADDQ8WWZ3 215 aa14.27□□□□□ -0.13
CIRBP-228ENST00000590347 GEMIN6Q8WXD5 167 aaKnown RBP14.27□□□□□ -0.13
CIRBP-228ENST00000590347 LRIG1Q96JA1 1093 aa14.27□□□□□ -0.13
CIRBP-228ENST00000590347 DNTTIP1Q9H147 329 aa14.27□□□□□ -0.13
CIRBP-228ENST00000590347 CHST8Q9H2A9 424 aa14.27□□□□□ -0.13
CIRBP-228ENST00000590347 EXOSC3Q9NQT5 275 aaKnown RBP14.27□□□□□ -0.13
CIRBP-228ENST00000590347 CYSLTR2Q9NS75 346 aa14.27□□□□□ -0.13
CIRBP-228ENST00000590347 EMC3Q9P0I2 261 aa14.27□□□□□ -0.13
CIRBP-228ENST00000590347 SEC14L3Q9UDX4 400 aa14.27□□□□□ -0.13
CIRBP-228ENST00000590347 FAM25EA8MYX2 175 aa14.26□□□□□ -0.13
CIRBP-228ENST00000590347 M0R3H8 397 aa14.26□□□□□ -0.13
CIRBP-228ENST00000590347 NME6O75414 186 aaPredicted RBP14.26□□□□□ -0.13
CIRBP-228ENST00000590347 RASGRP1O95267 797 aa14.26□□□□□ -0.13
CIRBP-228ENST00000590347 NFYBP25208 207 aa14.26□□□□□ -0.13
CIRBP-228ENST00000590347 PTBP1P26599 531 aaKnown RBP eCLIP14.26□□□□□ -0.13
CIRBP-228ENST00000590347 S100A11P31949 105 aa14.26□□□□□ -0.13
CIRBP-228ENST00000590347 IRS1P35568 1242 aa14.26□□□□□ -0.13
CIRBP-228ENST00000590347 PTGFRP43088 359 aa14.26□□□□□ -0.13
CIRBP-228ENST00000590347 SNRPGP62308 76 aaKnown RBP14.26□□□□□ -0.13
CIRBP-228ENST00000590347 IKZF1Q13422 519 aa14.26□□□□□ -0.13
CIRBP-228ENST00000590347 DOC2AQ14183 400 aa14.26□□□□□ -0.13
CIRBP-228ENST00000590347 CLINT1Q14677 625 aa14.26□□□□□ -0.13
CIRBP-228ENST00000590347 ATXN7L3Q14CW9 347 aaPredicted RBP14.26□□□□□ -0.13
CIRBP-228ENST00000590347 CHRNA6Q15825 494 aa14.26□□□□□ -0.13
CIRBP-228ENST00000590347 ZNF528Q3MIS6 628 aa14.26□□□□□ -0.13
CIRBP-228ENST00000590347 PRAMEF13Q5VWM6 474 aa14.26□□□□□ -0.13
CIRBP-228ENST00000590347 IQCHQ86VS3 1027 aa14.26□□□□□ -0.13
CIRBP-228ENST00000590347 UMODL1-AS1Q8N2C9 162 aa14.26□□□□□ -0.13
CIRBP-228ENST00000590347 OR51Q1Q8NH59 317 aa14.26□□□□□ -0.13
CIRBP-228ENST00000590347 KAT2AQ92830 837 aa14.26□□□□□ -0.13
CIRBP-228ENST00000590347 CPNE2Q96FN4 548 aaPredicted RBP14.26□□□□□ -0.13
CIRBP-228ENST00000590347 MRPL48Q96GC5 212 aaKnown RBP14.26□□□□□ -0.13
CIRBP-228ENST00000590347 FCRL4Q96PJ5 515 aa14.26□□□□□ -0.13
CIRBP-228ENST00000590347 WDR26Q9H7D7 661 aa14.26□□□□□ -0.13
CIRBP-228ENST00000590347 TRPS1Q9UHF7 1281 aa14.26□□□□□ -0.13
CIRBP-228ENST00000590347 PADI3Q9ULW8 664 aa14.26□□□□□ -0.13
CIRBP-228ENST00000590347 PCDHB9Q9Y5E1 797 aa14.26□□□□□ -0.13
CIRBP-228ENST00000590347 MGAT4DA6NG13 374 aa14.26□□□□□ -0.13
CIRBP-228ENST00000590347 CASC3O15234 703 aaKnown RBP14.26□□□□□ -0.13
CIRBP-228ENST00000590347 ITGB8P26012 769 aa14.26□□□□□ -0.13
CIRBP-228ENST00000590347 PNPLA4P41247 253 aa14.26□□□□□ -0.13
CIRBP-228ENST00000590347 TPBGQ13641 420 aa14.26□□□□□ -0.13
CIRBP-228ENST00000590347 TIGD5Q53EQ6 642 aa14.26□□□□□ -0.13
CIRBP-228ENST00000590347 GSG1LQ6UXU4 331 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms