RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 YRDCQ86U90 279 aaKnown RBP13.15□□□□□ -0.3
DDX39A-208ENST00000588692 IFNEQ86WN2 208 aa13.15□□□□□ -0.3
DDX39A-208ENST00000588692 NUDCD3Q8IVD9 361 aa13.15□□□□□ -0.3
DDX39A-208ENST00000588692 ZNF295-AS1Q8N0V1 137 aa13.15□□□□□ -0.3
DDX39A-208ENST00000588692 CEP70Q8NHQ1 597 aa13.15□□□□□ -0.3
DDX39A-208ENST00000588692 CLHC1Q8NHS4 586 aa13.15□□□□□ -0.3
DDX39A-208ENST00000588692 PPP1R14CQ8TAE6 165 aa13.15□□□□□ -0.3
DDX39A-208ENST00000588692 CIDECQ96AQ7 238 aaPredicted RBP13.15□□□□□ -0.3
DDX39A-208ENST00000588692 FAM120CQ9NX05 1096 aaKnown RBP13.15□□□□□ -0.3
DDX39A-208ENST00000588692 SH3BP4Q9P0V3 963 aa13.15□□□□□ -0.3
DDX39A-208ENST00000588692 NTMQ9P121 344 aa13.15□□□□□ -0.3
DDX39A-208ENST00000588692 BAIAP2L1Q9UHR4 511 aa13.15□□□□□ -0.3
DDX39A-208ENST00000588692 CD8B2A6NJW9 211 aa13.14□□□□□ -0.31
DDX39A-208ENST00000588692 ENO4A6NNW6 628 aa13.14□□□□□ -0.31
DDX39A-208ENST00000588692 SCAMP2O15127 329 aaKnown RBP13.14□□□□□ -0.31
DDX39A-208ENST00000588692 BIRC5O15392 142 aa13.14□□□□□ -0.31
DDX39A-208ENST00000588692 PEX11AO75192 247 aa13.14□□□□□ -0.31
DDX39A-208ENST00000588692 SNUPNO95149 360 aaKnown RBP13.14□□□□□ -0.31
DDX39A-208ENST00000588692 KCNH1O95259 989 aa13.14□□□□□ -0.31
DDX39A-208ENST00000588692 IL33O95760 270 aa13.14□□□□□ -0.31
DDX39A-208ENST00000588692 CPN1P15169 458 aa13.14□□□□□ -0.31
DDX39A-208ENST00000588692 CEACAM8P31997 349 aaPredicted RBP13.14□□□□□ -0.31
DDX39A-208ENST00000588692 CLK3P49761 638 aaKnown RBP13.14□□□□□ -0.31
DDX39A-208ENST00000588692 GAB1Q13480 694 aa13.14□□□□□ -0.31
DDX39A-208ENST00000588692 RCAN2Q14206 197 aa13.14□□□□□ -0.31
DDX39A-208ENST00000588692 MLC1Q15049 377 aa13.14□□□□□ -0.31
DDX39A-208ENST00000588692 ZNF385BQ569K4 471 aa13.14□□□□□ -0.31
DDX39A-208ENST00000588692 DCST1Q5T197 706 aa13.14□□□□□ -0.31
DDX39A-208ENST00000588692 SEM1Q6ZVN7 128 aa13.14□□□□□ -0.31
DDX39A-208ENST00000588692 CDRT4Q8N9R6 151 aa13.14□□□□□ -0.31
DDX39A-208ENST00000588692 HOXB13Q92826 284 aaPredicted RBP13.14□□□□□ -0.31
DDX39A-208ENST00000588692 WDYHV1Q96HA8 205 aa13.14□□□□□ -0.31
DDX39A-208ENST00000588692 ZIM3Q96PE6 472 aa13.14□□□□□ -0.31
DDX39A-208ENST00000588692 MS4A4EQ96PG1 132 aa13.14□□□□□ -0.31
DDX39A-208ENST00000588692 SDHAF3Q9NRP4 125 aa13.14□□□□□ -0.31
DDX39A-208ENST00000588692 TAS2R10Q9NYW0 307 aa13.14□□□□□ -0.31
DDX39A-208ENST00000588692 PPP4R1LQ9P1A2 415 aa13.14□□□□□ -0.31
DDX39A-208ENST00000588692 ATP6V1HQ9UI12 483 aa13.14□□□□□ -0.31
DDX39A-208ENST00000588692 ZDHHC2Q9UIJ5 367 aa13.14□□□□□ -0.31
DDX39A-208ENST00000588692 DKKL1Q9UK85 242 aa13.14□□□□□ -0.31
DDX39A-208ENST00000588692 ACTL7BQ9Y614 415 aa13.14□□□□□ -0.31
DDX39A-208ENST00000588692 DVL2O14641 736 aa13.13□□□□□ -0.31
DDX39A-208ENST00000588692 FADS1O60427 444 aa13.13□□□□□ -0.31
DDX39A-208ENST00000588692 SKAP2O75563 359 aaPredicted RBP13.13□□□□□ -0.31
DDX39A-208ENST00000588692 LYPLA1O75608 230 aaPredicted RBP13.13□□□□□ -0.31
DDX39A-208ENST00000588692 HSPA4LO95757 839 aa13.13□□□□□ -0.31
DDX39A-208ENST00000588692 IL2RAP01589 272 aa13.13□□□□□ -0.31
DDX39A-208ENST00000588692 SERPINE1P05121 402 aa13.13□□□□□ -0.31
DDX39A-208ENST00000588692 GFRA1P56159 465 aa13.13□□□□□ -0.31
DDX39A-208ENST00000588692 PRR5P85299 388 aa13.13□□□□□ -0.31
DDX39A-208ENST00000588692 MAD2L1Q13257 205 aaPredicted RBP13.13□□□□□ -0.31
DDX39A-208ENST00000588692 C6orf136Q5SQH8 315 aa13.13□□□□□ -0.31
DDX39A-208ENST00000588692 AAGABQ6PD74 315 aa13.13□□□□□ -0.31
DDX39A-208ENST00000588692 EXOC3L1Q86VI1 746 aa13.13□□□□□ -0.31
DDX39A-208ENST00000588692 DMRTC2Q8IXT2 367 aaPredicted RBP13.13□□□□□ -0.31
DDX39A-208ENST00000588692 KIRREL3Q8IZU9 778 aa13.13□□□□□ -0.31
DDX39A-208ENST00000588692 NATD1Q8N6N6 113 aa13.13□□□□□ -0.31
DDX39A-208ENST00000588692 FNDC5Q8NAU1 212 aa13.13□□□□□ -0.31
DDX39A-208ENST00000588692 NUP43Q8NFH3 380 aa13.13□□□□□ -0.31
DDX39A-208ENST00000588692 OR4K17Q8NGC6 315 aa13.13□□□□□ -0.31
DDX39A-208ENST00000588692 ZPLD1Q8TCW7 415 aa13.13□□□□□ -0.31
DDX39A-208ENST00000588692 LURAP1Q96LR2 239 aa13.13□□□□□ -0.31
DDX39A-208ENST00000588692 CALHM2Q9HA72 323 aa13.13□□□□□ -0.31
DDX39A-208ENST00000588692 HHATLQ9HCP6 504 aa13.13□□□□□ -0.31
DDX39A-208ENST00000588692 EQTNQ9NQ60 294 aa13.13□□□□□ -0.31
DDX39A-208ENST00000588692 ATAD3AQ9NVI7 634 aa13.13□□□□□ -0.31
DDX39A-208ENST00000588692 ZNF629Q9UEG4 869 aaPredicted RBP13.13□□□□□ -0.31
DDX39A-208ENST00000588692 FBXL2Q9UKC9 423 aa13.13□□□□□ -0.31
DDX39A-208ENST00000588692 TACC2O95359 2948 aa13.13□□□□□ -0.31
DDX39A-208ENST00000588692 MBD3L4A6NDZ8 208 aaPredicted RBP13.12□□□□□ -0.31
DDX39A-208ENST00000588692 MBD3L3A6NE82 208 aaPredicted RBP13.12□□□□□ -0.31
DDX39A-208ENST00000588692 MBD3L5A6NJ08 208 aaPredicted RBP13.12□□□□□ -0.31
DDX39A-208ENST00000588692 EMC8O43402 210 aa13.12□□□□□ -0.31
DDX39A-208ENST00000588692 SCO2O43819 266 aa13.12□□□□□ -0.31
DDX39A-208ENST00000588692 NKX2-2O95096 273 aa13.12□□□□□ -0.31
DDX39A-208ENST00000588692 ZWINTO95229 277 aa13.12□□□□□ -0.31
DDX39A-208ENST00000588692 MYZAPP0CAP1 466 aa13.12□□□□□ -0.31
DDX39A-208ENST00000588692 CHMP24386 653 aa13.12□□□□□ -0.31
DDX39A-208ENST00000588692 GABRA3P34903 492 aa13.12□□□□□ -0.31
DDX39A-208ENST00000588692 PEX19P40855 299 aa13.12□□□□□ -0.31
DDX39A-208ENST00000588692 MAP3K8P41279 467 aa13.12□□□□□ -0.31
DDX39A-208ENST00000588692 DSCR4P56555 118 aaPredicted RBP13.12□□□□□ -0.31
DDX39A-208ENST00000588692 GANABQ14697 944 aaKnown RBP13.12□□□□□ -0.31
DDX39A-208ENST00000588692 TNFAIP8L3Q5GJ75 292 aa13.12□□□□□ -0.31
DDX39A-208ENST00000588692 CEP85LQ5SZL2 805 aa13.12□□□□□ -0.31
DDX39A-208ENST00000588692 ZCCHC12Q6PEW1 402 aa13.12□□□□□ -0.31
DDX39A-208ENST00000588692 SZRD1Q7Z422 152 aa13.12□□□□□ -0.31
DDX39A-208ENST00000588692 WDR53Q7Z5U6 358 aaPredicted RBP13.12□□□□□ -0.31
DDX39A-208ENST00000588692 LIX1LQ8IVB5 337 aa13.12□□□□□ -0.31
DDX39A-208ENST00000588692 TRIM42Q8IWZ5 723 aa13.12□□□□□ -0.31
DDX39A-208ENST00000588692 FADS6Q8N9I5 356 aa13.12□□□□□ -0.31
DDX39A-208ENST00000588692 TNIP2Q8NFZ5 429 aa13.12□□□□□ -0.31
DDX39A-208ENST00000588692 MBD3L2Q8NHZ7 208 aaPredicted RBP13.12□□□□□ -0.31
DDX39A-208ENST00000588692 GPR151Q8TDV0 419 aa13.12□□□□□ -0.31
DDX39A-208ENST00000588692 TUBGCP3Q96CW5 907 aa13.12□□□□□ -0.31
DDX39A-208ENST00000588692 LRRC46Q96FV0 321 aa13.12□□□□□ -0.31
DDX39A-208ENST00000588692 PGM2Q96G03 612 aa13.12□□□□□ -0.31
DDX39A-208ENST00000588692 PKNOX2Q96KN3 472 aa13.12□□□□□ -0.31
DDX39A-208ENST00000588692 C3orf30Q96M34 536 aa13.12□□□□□ -0.31
DDX39A-208ENST00000588692 SFXN2Q96NB2 322 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms