RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 MORN4Q8NDC4 146 aa10.51□□□□□ -0.73
LIG3-204ENST00000585740 OR4K5Q8NGD3 323 aa10.51□□□□□ -0.73
LIG3-204ENST00000585740 OR5T3Q8NGG3 340 aa10.51□□□□□ -0.73
LIG3-204ENST00000585740 OR9A4Q8NGU2 314 aa10.51□□□□□ -0.73
LIG3-204ENST00000585740 C1orf216Q8TAB5 229 aa10.51□□□□□ -0.73
LIG3-204ENST00000585740 GGHQ92820 318 aa10.51□□□□□ -0.73
LIG3-204ENST00000585740 HOXB13Q92826 284 aaPredicted RBP10.51□□□□□ -0.73
LIG3-204ENST00000585740 CTHRC1Q96CG8 243 aa10.51□□□□□ -0.73
LIG3-204ENST00000585740 SDF2Q99470 211 aa10.51□□□□□ -0.73
LIG3-204ENST00000585740 FUNDC2Q9BWH2 189 aa10.51□□□□□ -0.73
LIG3-204ENST00000585740 PRRG3Q9BZD7 231 aa10.51□□□□□ -0.73
LIG3-204ENST00000585740 DUSP15Q9H1R2 295 aaPredicted RBP10.51□□□□□ -0.73
LIG3-204ENST00000585740 ERVMER34-1Q9H9K5 563 aa10.51□□□□□ -0.73
LIG3-204ENST00000585740 ADAP2Q9NPF8 381 aa10.51□□□□□ -0.73
LIG3-204ENST00000585740 ACOT13Q9NPJ3 140 aa10.51□□□□□ -0.73
LIG3-204ENST00000585740 EML5Q05BV3 1969 aa10.51□□□□□ -0.73
LIG3-204ENST00000585740 DNAH14Q0VDD8 3507 aa10.51□□□□□ -0.73
LIG3-204ENST00000585740 CACNA1BQ00975 2339 aa10.51□□□□□ -0.73
LIG3-204ENST00000585740 SPAG17Q6Q759 2223 aa10.5□□□□□ -0.73
LIG3-204ENST00000585740 FITM1A5D6W6 292 aa10.5□□□□□ -0.73
LIG3-204ENST00000585740 AGAP5A6NIR3 686 aa10.5□□□□□ -0.73
LIG3-204ENST00000585740 H0YIG0 161 aa10.5□□□□□ -0.73
LIG3-204ENST00000585740 H3BN98 237 aa10.5□□□□□ -0.73
LIG3-204ENST00000585740 STK25O00506 426 aa10.5□□□□□ -0.73
LIG3-204ENST00000585740 SLC22A1O15245 554 aa10.5□□□□□ -0.73
LIG3-204ENST00000585740 KIAA0513O60268 411 aa10.5□□□□□ -0.73
LIG3-204ENST00000585740 FMO6PO60774 539 aa10.5□□□□□ -0.73
LIG3-204ENST00000585740 INMTO95050 263 aa10.5□□□□□ -0.73
LIG3-204ENST00000585740 NKX2-2O95096 273 aa10.5□□□□□ -0.73
LIG3-204ENST00000585740 ATE1O95260 518 aa10.5□□□□□ -0.73
LIG3-204ENST00000585740 ZBTB11O95625 1053 aaPredicted RBP10.5□□□□□ -0.73
LIG3-204ENST00000585740 FADS2O95864 444 aaKnown RBP10.5□□□□□ -0.73
LIG3-204ENST00000585740 ACVR2AP27037 513 aa10.5□□□□□ -0.73
LIG3-204ENST00000585740 MAOBP27338 520 aa10.5□□□□□ -0.73
LIG3-204ENST00000585740 POU1F1P28069 291 aa10.5□□□□□ -0.73
LIG3-204ENST00000585740 GALNSP34059 522 aa10.5□□□□□ -0.73
LIG3-204ENST00000585740 CNR2P34972 360 aa10.5□□□□□ -0.73
LIG3-204ENST00000585740 MAP3K8P41279 467 aa10.5□□□□□ -0.73
LIG3-204ENST00000585740 GABRA4P48169 554 aa10.5□□□□□ -0.73
LIG3-204ENST00000585740 GSSP48637 474 aa10.5□□□□□ -0.73
LIG3-204ENST00000585740 MASP1P48740 699 aa10.5□□□□□ -0.73
LIG3-204ENST00000585740 IGLV3-21P80748 117 aaPredicted RBP10.5□□□□□ -0.73
LIG3-204ENST00000585740 ID2Q02363 134 aa10.5□□□□□ -0.73
LIG3-204ENST00000585740 MGAT2Q10469 447 aa10.5□□□□□ -0.73
LIG3-204ENST00000585740 ZNF155Q12901 538 aaPredicted RBP10.5□□□□□ -0.73
LIG3-204ENST00000585740 NFATC3Q12968 1075 aa10.5□□□□□ -0.73
LIG3-204ENST00000585740 GRM7Q14831 915 aa10.5□□□□□ -0.73
LIG3-204ENST00000585740 ZNHIT3Q15649 155 aaPredicted RBP10.5□□□□□ -0.73
LIG3-204ENST00000585740 DECR1Q16698 335 aa10.5□□□□□ -0.73
LIG3-204ENST00000585740 DEFB110Q30KQ9 67 aa10.5□□□□□ -0.73
LIG3-204ENST00000585740 TRMT12Q53H54 448 aaKnown RBP10.5□□□□□ -0.73
LIG3-204ENST00000585740 DCST2Q5T1A1 773 aa10.5□□□□□ -0.73
LIG3-204ENST00000585740 MEDAGQ5VYS4 303 aa10.5□□□□□ -0.73
LIG3-204ENST00000585740 AP1ARQ63HQ0 302 aa10.5□□□□□ -0.73
LIG3-204ENST00000585740 CCDC81Q6ZN84 652 aa10.5□□□□□ -0.73
LIG3-204ENST00000585740 ZNF836Q6ZNA1 936 aa10.5□□□□□ -0.73
LIG3-204ENST00000585740 OLIG3Q7RTU3 272 aa10.5□□□□□ -0.73
LIG3-204ENST00000585740 GALNT12Q8IXK2 581 aa10.5□□□□□ -0.73
LIG3-204ENST00000585740 TMEFF1Q8IYR6 380 aa10.5□□□□□ -0.73
LIG3-204ENST00000585740 VWA5B2Q8N398 1253 aa10.5□□□□□ -0.73
LIG3-204ENST00000585740 TMEM52Q8NDY8 209 aa10.5□□□□□ -0.73
LIG3-204ENST00000585740 OR8J1Q8NGP2 316 aa10.5□□□□□ -0.73
LIG3-204ENST00000585740 PIGXQ8TBF5 258 aa10.5□□□□□ -0.73
LIG3-204ENST00000585740 DIO2Q92813 273 aa10.5□□□□□ -0.73
LIG3-204ENST00000585740 UBE2FQ969M7 185 aa10.5□□□□□ -0.73
LIG3-204ENST00000585740 YIPF6Q96EC8 236 aa10.5□□□□□ -0.73
LIG3-204ENST00000585740 DTNBP1Q96EV8 351 aa10.5□□□□□ -0.73
LIG3-204ENST00000585740 MCHR1Q99705 422 aa10.5□□□□□ -0.73
LIG3-204ENST00000585740 LMF2Q9BU23 707 aaKnown RBP10.5□□□□□ -0.73
LIG3-204ENST00000585740 TEX12Q9BXU0 123 aa10.5□□□□□ -0.73
LIG3-204ENST00000585740 RACGAP1Q9H0H5 632 aa10.5□□□□□ -0.73
LIG3-204ENST00000585740 ANKRA2Q9H9E1 313 aa10.5□□□□□ -0.73
LIG3-204ENST00000585740 LIN28AQ9H9Z2 209 aaKnown RBP10.5□□□□□ -0.73
LIG3-204ENST00000585740 SLC25A19Q9HC21 320 aa10.5□□□□□ -0.73
LIG3-204ENST00000585740 NECTIN3Q9NQS3 549 aa10.5□□□□□ -0.73
LIG3-204ENST00000585740 PRTFDC1Q9NRG1 225 aa10.5□□□□□ -0.73
LIG3-204ENST00000585740 ENAMQ9NRM1 1142 aa10.5□□□□□ -0.73
LIG3-204ENST00000585740 STARD5Q9NSY2 213 aa10.5□□□□□ -0.73
LIG3-204ENST00000585740 MAN2C1Q9NTJ4 1040 aa10.5□□□□□ -0.73
LIG3-204ENST00000585740 C14orf105Q9NVL8 296 aa10.5□□□□□ -0.73
LIG3-204ENST00000585740 SOHLH2Q9NX45 425 aa10.5□□□□□ -0.73
LIG3-204ENST00000585740 AASSQ9UDR5 926 aa10.5□□□□□ -0.73
LIG3-204ENST00000585740 A0A0A6YYC8 382 aaPredicted RBP10.49□□□□□ -0.73
LIG3-204ENST00000585740 IRGMA1A4Y4 181 aa10.49□□□□□ -0.73
LIG3-204ENST00000585740 SNTNA6NMZ2 147 aa10.49□□□□□ -0.73
LIG3-204ENST00000585740 FAM227AF5H4B4 570 aa10.49□□□□□ -0.73
LIG3-204ENST00000585740 I3L1I5 382 aaPredicted RBP10.49□□□□□ -0.73
LIG3-204ENST00000585740 BCAT2O15382 392 aaPredicted RBP10.49□□□□□ -0.73
LIG3-204ENST00000585740 ZNF749O43361 778 aa10.49□□□□□ -0.73
LIG3-204ENST00000585740 FOXS1O43638 330 aa10.49□□□□□ -0.73
LIG3-204ENST00000585740 CNOT3O75175 753 aaKnown RBP10.49□□□□□ -0.73
LIG3-204ENST00000585740 GABARAPO95166 117 aa10.49□□□□□ -0.73
LIG3-204ENST00000585740 NID1P14543 1247 aa10.49□□□□□ -0.73
LIG3-204ENST00000585740 MMP11P24347 488 aa10.49□□□□□ -0.73
LIG3-204ENST00000585740 PSMB9P28065 219 aa10.49□□□□□ -0.73
LIG3-204ENST00000585740 STAT5AP42229 794 aa10.49□□□□□ -0.73
LIG3-204ENST00000585740 MAP2K4P45985 399 aa10.49□□□□□ -0.73
LIG3-204ENST00000585740 GPR3P46089 330 aa10.49□□□□□ -0.73
LIG3-204ENST00000585740 AFF3P51826 1226 aaKnown RBP10.49□□□□□ -0.73
LIG3-204ENST00000585740 SMSP52788 366 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms