RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 NDUFA13Q9P0J0 144 aa9.68□□□□□ -0.86
LIG3-203ENST00000585370 KIF17Q9P2E2 1029 aa9.68□□□□□ -0.86
LIG3-203ENST00000585370 PRODH2Q9UF12 536 aa9.68□□□□□ -0.86
LIG3-203ENST00000585370 KCND3Q9UK17 655 aa9.68□□□□□ -0.86
LIG3-203ENST00000585370 ACAD8Q9UKU7 415 aa9.68□□□□□ -0.86
LIG3-203ENST00000585370 TMCC3Q9ULS5 477 aa9.68□□□□□ -0.86
LIG3-203ENST00000585370 LYVE1Q9Y5Y7 322 aa9.68□□□□□ -0.86
LIG3-203ENST00000585370 U3KQV3 271 aa9.68□□□□□ -0.86
LIG3-203ENST00000585370 RP1P56715 2156 aa9.68□□□□□ -0.86
LIG3-203ENST00000585370 PIEZO2Q9H5I5 2752 aa9.68□□□□□ -0.86
LIG3-203ENST00000585370 ASH1LQ9NR48 2969 aaKnown RBP9.67□□□□□ -0.86
LIG3-203ENST00000585370 LOC100130705A0A1B0GUX0 176 aa9.67□□□□□ -0.86
LIG3-203ENST00000585370 A0A1B0GX78 115 aa9.67□□□□□ -0.86
LIG3-203ENST00000585370 A6NHS1 94 aa9.67□□□□□ -0.86
LIG3-203ENST00000585370 H3BNH8 94 aa9.67□□□□□ -0.86
LIG3-203ENST00000585370 C1QL1O75973 258 aa9.67□□□□□ -0.86
LIG3-203ENST00000585370 CCNB2O95067 398 aa9.67□□□□□ -0.86
LIG3-203ENST00000585370 NKX2-2O95096 273 aa9.67□□□□□ -0.86
LIG3-203ENST00000585370 MED26O95402 600 aa9.67□□□□□ -0.86
LIG3-203ENST00000585370 GP1BAP07359 652 aa9.67□□□□□ -0.86
LIG3-203ENST00000585370 FOLR1P15328 257 aa9.67□□□□□ -0.86
LIG3-203ENST00000585370 ALAS2P22557 587 aa9.67□□□□□ -0.86
LIG3-203ENST00000585370 PRKACGP22612 351 aa9.67□□□□□ -0.86
LIG3-203ENST00000585370 RYKP34925 604 aa9.67□□□□□ -0.86
LIG3-203ENST00000585370 OR1E2P47887 323 aa9.67□□□□□ -0.86
LIG3-203ENST00000585370 DAPP51397 102 aa9.67□□□□□ -0.86
LIG3-203ENST00000585370 CDH12P55289 794 aa9.67□□□□□ -0.86
LIG3-203ENST00000585370 TUBA4AP68366 448 aa9.67□□□□□ -0.86
LIG3-203ENST00000585370 POU6F2P78424 691 aaPredicted RBP9.67□□□□□ -0.86
LIG3-203ENST00000585370 CCL7P80098 99 aa9.67□□□□□ -0.86
LIG3-203ENST00000585370 MYBPC1Q00872 1141 aa9.67□□□□□ -0.86
LIG3-203ENST00000585370 ID2Q02363 134 aa9.67□□□□□ -0.86
LIG3-203ENST00000585370 FUT5Q11128 374 aa9.67□□□□□ -0.86
LIG3-203ENST00000585370 FUT7Q11130 342 aa9.67□□□□□ -0.86
LIG3-203ENST00000585370 DUSP8Q13202 625 aa9.67□□□□□ -0.86
LIG3-203ENST00000585370 TRA2AQ13595 282 aaKnown RBP eCLIP9.67□□□□□ -0.86
LIG3-203ENST00000585370 EIPR1Q53HC9 387 aa9.67□□□□□ -0.86
LIG3-203ENST00000585370 GUSBP11Q6P575 273 aa9.67□□□□□ -0.86
LIG3-203ENST00000585370 QSOX2Q6ZRP7 698 aa9.67□□□□□ -0.86
LIG3-203ENST00000585370 TTLL10Q6ZVT0 673 aa9.67□□□□□ -0.86
LIG3-203ENST00000585370 SPACA3Q8IXA5 215 aa9.67□□□□□ -0.86
LIG3-203ENST00000585370 TAGAPQ8N103 731 aa9.67□□□□□ -0.86
LIG3-203ENST00000585370 ATG16L2Q8NAA4 619 aa9.67□□□□□ -0.86
LIG3-203ENST00000585370 TOR1AIP2Q8NFQ8 470 aa9.67□□□□□ -0.86
LIG3-203ENST00000585370 OR4C15Q8NGM1 316 aa9.67□□□□□ -0.86
LIG3-203ENST00000585370 OR52P1PQ8NH57 321 aa9.67□□□□□ -0.86
LIG3-203ENST00000585370 PHF10Q8WUB8 498 aaKnown RBP9.67□□□□□ -0.86
LIG3-203ENST00000585370 OIT3Q8WWZ8 545 aa9.67□□□□□ -0.86
LIG3-203ENST00000585370 SLC39A7Q92504 469 aa9.67□□□□□ -0.86
LIG3-203ENST00000585370 ZNF501Q96CX3 271 aaPredicted RBP9.67□□□□□ -0.86
LIG3-203ENST00000585370 RMND5BQ96G75 393 aaPredicted RBP9.67□□□□□ -0.86
LIG3-203ENST00000585370 DHRS1Q96LJ7 313 aa9.67□□□□□ -0.86
LIG3-203ENST00000585370 SDF2Q99470 211 aa9.67□□□□□ -0.86
LIG3-203ENST00000585370 LMF2Q9BU23 707 aaKnown RBP9.67□□□□□ -0.86
LIG3-203ENST00000585370 MRPS26Q9BYN8 205 aaKnown RBP9.67□□□□□ -0.86
LIG3-203ENST00000585370 POLR2J2Q9GZM3 115 aaKnown RBP9.67□□□□□ -0.86
LIG3-203ENST00000585370 POLR2J3Q9H1A7 115 aaKnown RBP9.67□□□□□ -0.86
LIG3-203ENST00000585370 ZNF304Q9HCX3 659 aa9.67□□□□□ -0.86
LIG3-203ENST00000585370 ADAP2Q9NPF8 381 aa9.67□□□□□ -0.86
LIG3-203ENST00000585370 MKKSQ9NPJ1 570 aaPredicted RBP9.67□□□□□ -0.86
LIG3-203ENST00000585370 KRT84Q9NSB2 600 aa9.67□□□□□ -0.86
LIG3-203ENST00000585370 VNN3Q9NY84 501 aa9.67□□□□□ -0.86
LIG3-203ENST00000585370 NDOR1Q9UHB4 597 aa9.67□□□□□ -0.86
LIG3-203ENST00000585370 TMEFF2Q9UIK5 374 aaPredicted RBP9.67□□□□□ -0.86
LIG3-203ENST00000585370 CFL2Q9Y281 166 aa9.67□□□□□ -0.86
LIG3-203ENST00000585370 POFUT2Q9Y2G5 429 aa9.67□□□□□ -0.86
LIG3-203ENST00000585370 WDR45Q9Y484 360 aa9.67□□□□□ -0.86
LIG3-203ENST00000585370 TESMINQ9Y4I5 508 aa9.67□□□□□ -0.86
LIG3-203ENST00000585370 PCDHGA8Q9Y5G5 932 aa9.67□□□□□ -0.86
LIG3-203ENST00000585370 MAGED1Q9Y5V3 778 aaPredicted RBP9.67□□□□□ -0.86
LIG3-203ENST00000585370 KCNE3Q9Y6H6 103 aa9.67□□□□□ -0.86
LIG3-203ENST00000585370 TENM4Q6N022 2769 aa9.66□□□□□ -0.86
LIG3-203ENST00000585370 BOD1L1Q8NFC6 3051 aa9.66□□□□□ -0.86
LIG3-203ENST00000585370 PRAMEF25A6NGN4 478 aa9.66□□□□□ -0.86
LIG3-203ENST00000585370 A8MU76 341 aa9.66□□□□□ -0.86
LIG3-203ENST00000585370 FAAHO00519 579 aa9.66□□□□□ -0.86
LIG3-203ENST00000585370 ATXN7O15265 892 aaPredicted RBP9.66□□□□□ -0.86
LIG3-203ENST00000585370 PRAMEF2O60811 474 aa9.66□□□□□ -0.86
LIG3-203ENST00000585370 CSO75390 466 aaKnown RBP9.66□□□□□ -0.86
LIG3-203ENST00000585370 DIRAS1O95057 198 aa9.66□□□□□ -0.86
LIG3-203ENST00000585370 CBX7O95931 251 aa9.66□□□□□ -0.86
LIG3-203ENST00000585370 RPLP0P05388 317 aaKnown RBP9.66□□□□□ -0.86
LIG3-203ENST00000585370 DBIP07108 87 aaKnown RBP9.66□□□□□ -0.86
LIG3-203ENST00000585370 H1F0P07305 194 aaKnown RBP9.66□□□□□ -0.86
LIG3-203ENST00000585370 ACP2P11117 423 aa9.66□□□□□ -0.86
LIG3-203ENST00000585370 S1PR1P21453 382 aa9.66□□□□□ -0.86
LIG3-203ENST00000585370 FBLP22087 321 aaKnown RBP9.66□□□□□ -0.86
LIG3-203ENST00000585370 SOX18P35713 384 aa9.66□□□□□ -0.86
LIG3-203ENST00000585370 LIMS1P48059 325 aa9.66□□□□□ -0.86
LIG3-203ENST00000585370 PSMD4P55036 377 aaKnown RBP9.66□□□□□ -0.86
LIG3-203ENST00000585370 TPD52P55327 224 aaPredicted RBP9.66□□□□□ -0.86
LIG3-203ENST00000585370 CSNK2BP67870 215 aa9.66□□□□□ -0.86
LIG3-203ENST00000585370 CHRNEQ04844 493 aa9.66□□□□□ -0.86
LIG3-203ENST00000585370 KCNAB2Q13303 367 aa9.66□□□□□ -0.86
LIG3-203ENST00000585370 KEAP1Q14145 624 aa9.66□□□□□ -0.86
LIG3-203ENST00000585370 KCNAB1Q14722 419 aa9.66□□□□□ -0.86
LIG3-203ENST00000585370 DUSP5Q16690 384 aa9.66□□□□□ -0.86
LIG3-203ENST00000585370 ZIK1Q3SY52 487 aaPredicted RBP9.66□□□□□ -0.86
LIG3-203ENST00000585370 RBM48Q5RL73 367 aaKnown RBP9.66□□□□□ -0.86
LIG3-203ENST00000585370 DCST1Q5T197 706 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms