RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 HMOX2P30519 316 aa13.57□□□□□ -0.24
VAPA-209ENST00000585042 CORO7P57737 925 aa13.57□□□□□ -0.24
VAPA-209ENST00000585042 NAA20P61599 178 aa13.57□□□□□ -0.24
VAPA-209ENST00000585042 PRSS57Q6UWY2 283 aa13.57□□□□□ -0.24
VAPA-209ENST00000585042 P4HA3Q7Z4N8 544 aa13.57□□□□□ -0.24
VAPA-209ENST00000585042 CXorf67Q86X51 503 aaPredicted RBP13.57□□□□□ -0.24
VAPA-209ENST00000585042 SLC44A2Q8IWA5 706 aaPredicted RBP13.57□□□□□ -0.24
VAPA-209ENST00000585042 GCNT2Q8N0V5 402 aa13.57□□□□□ -0.24
VAPA-209ENST00000585042 MEIOBQ8N635 442 aa13.57□□□□□ -0.24
VAPA-209ENST00000585042 FADS6Q8N9I5 356 aa13.57□□□□□ -0.24
VAPA-209ENST00000585042 OR4K17Q8NGC6 315 aa13.57□□□□□ -0.24
VAPA-209ENST00000585042 OR9A2Q8NGT5 310 aa13.57□□□□□ -0.24
VAPA-209ENST00000585042 KAT2AQ92830 837 aa13.57□□□□□ -0.24
VAPA-209ENST00000585042 EXOSC8Q96B26 276 aaKnown RBP13.57□□□□□ -0.24
VAPA-209ENST00000585042 HBEGFQ99075 208 aa13.57□□□□□ -0.24
VAPA-209ENST00000585042 SLC39A3Q9BRY0 314 aa13.57□□□□□ -0.24
VAPA-209ENST00000585042 ACPTQ9BZG2 426 aa13.57□□□□□ -0.24
VAPA-209ENST00000585042 HHATLQ9HCP6 504 aa13.57□□□□□ -0.24
VAPA-209ENST00000585042 MRTO4Q9UKD2 239 aaKnown RBP13.57□□□□□ -0.24
VAPA-209ENST00000585042 GRID1Q9ULK0 1009 aa13.57□□□□□ -0.24
VAPA-209ENST00000585042 ABCG2Q9UNQ0 655 aa13.57□□□□□ -0.24
VAPA-209ENST00000585042 OR10H1Q9Y4A9 318 aa13.57□□□□□ -0.24
VAPA-209ENST00000585042 EXOC1LA0A1B0GW35 172 aa13.56□□□□□ -0.24
VAPA-209ENST00000585042 SLC22A20A6NK97 555 aa13.56□□□□□ -0.24
VAPA-209ENST00000585042 TTC36A6NLP5 189 aa13.56□□□□□ -0.24
VAPA-209ENST00000585042 MYO1GB0I1T2 1018 aa13.56□□□□□ -0.24
VAPA-209ENST00000585042 H3BQF6 201 aa13.56□□□□□ -0.24
VAPA-209ENST00000585042 FADS1O60427 444 aa13.56□□□□□ -0.24
VAPA-209ENST00000585042 DLX3O60479 287 aa13.56□□□□□ -0.24
VAPA-209ENST00000585042 ANXA4P09525 319 aaPredicted RBP13.56□□□□□ -0.24
VAPA-209ENST00000585042 IFI6P09912 130 aa13.56□□□□□ -0.24
VAPA-209ENST00000585042 CHN1P15882 459 aa13.56□□□□□ -0.24
VAPA-209ENST00000585042 DDCP20711 480 aa13.56□□□□□ -0.24
VAPA-209ENST00000585042 FPR1P21462 350 aa13.56□□□□□ -0.24
VAPA-209ENST00000585042 TIA1P31483 386 aaKnown RBP eCLIP13.56□□□□□ -0.249e-7■■□□□ 13.3
VAPA-209ENST00000585042 EVI2BP34910 448 aa13.56□□□□□ -0.24
VAPA-209ENST00000585042 CD79BP40259 229 aa13.56□□□□□ -0.24
VAPA-209ENST00000585042 PRKAA2P54646 552 aa13.56□□□□□ -0.24
VAPA-209ENST00000585042 PSG6Q00889 435 aa13.56□□□□□ -0.24
VAPA-209ENST00000585042 LTBQ06643 244 aa13.56□□□□□ -0.24
VAPA-209ENST00000585042 OR5M10Q6IEU7 315 aa13.56□□□□□ -0.24
VAPA-209ENST00000585042 NPSR1Q6W5P4 371 aa13.56□□□□□ -0.24
VAPA-209ENST00000585042 OR7G2Q8NG99 324 aa13.56□□□□□ -0.24
VAPA-209ENST00000585042 FAM76AQ8TAV0 307 aa13.56□□□□□ -0.24
VAPA-209ENST00000585042 L3HYPDHQ96EM0 354 aa13.56□□□□□ -0.24
VAPA-209ENST00000585042 APIPQ96GX9 242 aa13.56□□□□□ -0.24
VAPA-209ENST00000585042 BBS4Q96RK4 519 aa13.56□□□□□ -0.24
VAPA-209ENST00000585042 PTGES2Q9H7Z7 377 aa13.56□□□□□ -0.24
VAPA-209ENST00000585042 ANKRA2Q9H9E1 313 aa13.56□□□□□ -0.24
VAPA-209ENST00000585042 TMEM216Q9P0N5 145 aa13.56□□□□□ -0.24
VAPA-209ENST00000585042 SENP1Q9P0U3 644 aa13.56□□□□□ -0.24
VAPA-209ENST00000585042 PPP4R1LQ9P1A2 415 aa13.56□□□□□ -0.24
VAPA-209ENST00000585042 C19orf53Q9UNZ5 99 aaPredicted RBP13.56□□□□□ -0.24
VAPA-209ENST00000585042 ZNF175Q9Y473 711 aa13.56□□□□□ -0.24
VAPA-209ENST00000585042 VPS13CQ709C8 3753 aa13.55□□□□□ -0.24
VAPA-209ENST00000585042 A0A1W2PPR1 153 aa13.55□□□□□ -0.24
VAPA-209ENST00000585042 EMC8O43402 210 aa13.55□□□□□ -0.24
VAPA-209ENST00000585042 GSTA1P08263 222 aa13.55□□□□□ -0.24
VAPA-209ENST00000585042 CD8BP10966 210 aa13.55□□□□□ -0.24
VAPA-209ENST00000585042 CRYGSP22914 178 aa13.55□□□□□ -0.24
VAPA-209ENST00000585042 ADSLP30566 484 aaPredicted RBP13.55□□□□□ -0.24
VAPA-209ENST00000585042 CLK3P49761 638 aaKnown RBP13.55□□□□□ -0.24
VAPA-209ENST00000585042 PSMD4P55036 377 aaKnown RBP13.55□□□□□ -0.24
VAPA-209ENST00000585042 FAM27E3Q08E93 113 aa13.55□□□□□ -0.24
VAPA-209ENST00000585042 LCP2Q13094 533 aa13.55□□□□□ -0.24
VAPA-209ENST00000585042 DECR1Q16698 335 aa13.55□□□□□ -0.24
VAPA-209ENST00000585042 TCHHL1Q5QJ38 904 aaPredicted RBP13.55□□□□□ -0.24
VAPA-209ENST00000585042 KRTAP1-3Q8IUG1 177 aa13.55□□□□□ -0.24
VAPA-209ENST00000585042 OR2M3Q8NG83 312 aa13.55□□□□□ -0.24
VAPA-209ENST00000585042 UHMK1Q8TAS1 419 aaKnown RBP13.55□□□□□ -0.24
VAPA-209ENST00000585042 ACMSDQ8TDX5 336 aa13.55□□□□□ -0.24
VAPA-209ENST00000585042 CCDC126Q96EE4 140 aa13.55□□□□□ -0.24
VAPA-209ENST00000585042 PGM2Q96G03 612 aa13.55□□□□□ -0.24
VAPA-209ENST00000585042 WFIKKN1Q96NZ8 548 aa13.55□□□□□ -0.24
VAPA-209ENST00000585042 TMEM237Q96Q45 408 aa13.55□□□□□ -0.24
VAPA-209ENST00000585042 PIGQQ9BRB3 760 aa13.55□□□□□ -0.24
VAPA-209ENST00000585042 DSN1Q9H410 356 aa13.55□□□□□ -0.24
VAPA-209ENST00000585042 FAM120CQ9NX05 1096 aaKnown RBP13.55□□□□□ -0.24
VAPA-209ENST00000585042 STOML1Q9UBI4 398 aa13.55□□□□□ -0.24
VAPA-209ENST00000585042 RIPK2O43353 540 aa13.54□□□□□ -0.24
VAPA-209ENST00000585042 SMNDC1O75940 238 aaKnown RBP eCLIP13.54□□□□□ -0.241e-7■■■□□ 18.1
VAPA-209ENST00000585042 SLU7O95391 586 aaKnown RBP13.54□□□□□ -0.24
VAPA-209ENST00000585042 CGAP01215 116 aa13.54□□□□□ -0.24
VAPA-209ENST00000585042 HK1P19367 917 aa13.54□□□□□ -0.24
VAPA-209ENST00000585042 KIR2DL2P43627 348 aaPredicted RBP13.54□□□□□ -0.24
VAPA-209ENST00000585042 ZNF763Q0D2J5 394 aa13.54□□□□□ -0.24
VAPA-209ENST00000585042 C2orf80Q0P641 193 aa13.54□□□□□ -0.24
VAPA-209ENST00000585042 POU4F3Q15319 338 aa13.54□□□□□ -0.24
VAPA-209ENST00000585042 ZNHIT3Q15649 155 aaPredicted RBP13.54□□□□□ -0.24
VAPA-209ENST00000585042 ZNF474Q6S9Z5 364 aaPredicted RBP13.54□□□□□ -0.24
VAPA-209ENST00000585042 BTLAQ7Z6A9 289 aa13.54□□□□□ -0.24
VAPA-209ENST00000585042 P3H2Q8IVL5 708 aa13.54□□□□□ -0.24
VAPA-209ENST00000585042 CNEP1R1Q8N9A8 125 aa13.54□□□□□ -0.24
VAPA-209ENST00000585042 LRRN4CLQ8ND94 238 aa13.54□□□□□ -0.24
VAPA-209ENST00000585042 OR4N2Q8NGD1 307 aa13.54□□□□□ -0.24
VAPA-209ENST00000585042 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.54□□□□□ -0.24
VAPA-209ENST00000585042 CAVIN3Q969G5 261 aa13.54□□□□□ -0.24
VAPA-209ENST00000585042 EFHD2Q96C19 240 aaPredicted RBP13.54□□□□□ -0.24
VAPA-209ENST00000585042 METTL2AQ96IZ6 378 aaKnown RBP13.54□□□□□ -0.24
VAPA-209ENST00000585042 RNF122Q9H9V4 155 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms