RNA–Protein interactions for RNA: ENST00000580738.5

NDEL1-209, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-209ENST00000580738 GALNT1Q10472 559 aaPredicted RBP17.12■□□□□ 0.33
NDEL1-209ENST00000580738 STX5Q13190 355 aa17.12■□□□□ 0.33
NDEL1-209ENST00000580738 SGCBQ16585 318 aa17.12■□□□□ 0.33
NDEL1-209ENST00000580738 KRTAP24-1Q3LI83 254 aa17.12■□□□□ 0.33
NDEL1-209ENST00000580738 TTC19Q6DKK2 380 aaPredicted RBP17.12■□□□□ 0.33
NDEL1-209ENST00000580738 PPP4R4Q6NUP7 873 aa17.12■□□□□ 0.33
NDEL1-209ENST00000580738 ADAM5Q6NVV9 412 aa17.12■□□□□ 0.33
NDEL1-209ENST00000580738 DNM1P46Q6ZS02 220 aa17.12■□□□□ 0.33
NDEL1-209ENST00000580738 CYS1Q717R9 158 aa17.12■□□□□ 0.33
NDEL1-209ENST00000580738 CCDC116Q8IYX3 515 aa17.12■□□□□ 0.33
NDEL1-209ENST00000580738 METTL25Q8N6Q8 603 aa17.12■□□□□ 0.33
NDEL1-209ENST00000580738 PPM1NQ8N819 430 aa17.12■□□□□ 0.33
NDEL1-209ENST00000580738 OR6K3Q8NGY3 331 aa17.12■□□□□ 0.33
NDEL1-209ENST00000580738 NEUROG1Q92886 237 aa17.12■□□□□ 0.33
NDEL1-209ENST00000580738 GTPBP3Q969Y2 492 aaKnown RBP17.12■□□□□ 0.33
NDEL1-209ENST00000580738 ATP6V1E2Q96A05 226 aa17.12■□□□□ 0.33
NDEL1-209ENST00000580738 STMN4Q9H169 189 aaPredicted RBP17.12■□□□□ 0.33
NDEL1-209ENST00000580738 FARSBQ9NSD9 589 aaKnown RBP17.12■□□□□ 0.33
NDEL1-209ENST00000580738 FLRT3Q9NZU0 649 aa17.12■□□□□ 0.33
NDEL1-209ENST00000580738 PSME2Q9UL46 239 aa17.12■□□□□ 0.33
NDEL1-209ENST00000580738 MAGED1Q9Y5V3 778 aaPredicted RBP17.12■□□□□ 0.33
NDEL1-209ENST00000580738 ZNF780BQ9Y6R6 833 aa17.12■□□□□ 0.33
NDEL1-209ENST00000580738 ANK2Q01484 3957 aa17.12■□□□□ 0.33
NDEL1-209ENST00000580738 UQCRHLA0A096LP55 91 aa17.11■□□□□ 0.33
NDEL1-209ENST00000580738 SHISA8B8ZZ34 492 aa17.11■□□□□ 0.33
NDEL1-209ENST00000580738 FAM157CP0CG43 387 aa17.11■□□□□ 0.33
NDEL1-209ENST00000580738 FCGR2AP12318 317 aa17.11■□□□□ 0.33
NDEL1-209ENST00000580738 RPS3AP61247 264 aaKnown RBP17.11■□□□□ 0.33
NDEL1-209ENST00000580738 FAM219BQ5XKK7 198 aa17.11■□□□□ 0.33
NDEL1-209ENST00000580738 GGNQ86UU5 652 aa17.11■□□□□ 0.33
NDEL1-209ENST00000580738 SLC44A2Q8IWA5 706 aaPredicted RBP17.11■□□□□ 0.33
NDEL1-209ENST00000580738 ZNF675Q8TD23 568 aa17.11■□□□□ 0.33
NDEL1-209ENST00000580738 SMAP2Q8WU79 429 aaPredicted RBP17.11■□□□□ 0.33
NDEL1-209ENST00000580738 GFM2Q969S9 779 aaKnown RBP17.11■□□□□ 0.33
NDEL1-209ENST00000580738 FOLH1BQ9HBA9 442 aa17.11■□□□□ 0.33
NDEL1-209ENST00000580738 ZBTB26Q9HCK0 441 aa17.11■□□□□ 0.33
NDEL1-209ENST00000580738 CPSF2Q9P2I0 782 aaKnown RBP17.11■□□□□ 0.33
NDEL1-209ENST00000580738 SLC12A4Q9UP95 1085 aa17.11■□□□□ 0.33
NDEL1-209ENST00000580738 TNPO3Q9Y5L0 923 aaKnown RBP17.11■□□□□ 0.33
NDEL1-209ENST00000580738 LINC01387J3KSC0 135 aa17.1■□□□□ 0.33
NDEL1-209ENST00000580738 CLOCKO15516 846 aa17.1■□□□□ 0.33
NDEL1-209ENST00000580738 FADS1O60427 444 aa17.1■□□□□ 0.33
NDEL1-209ENST00000580738 PLGP00747 810 aaPredicted RBP17.1■□□□□ 0.33
NDEL1-209ENST00000580738 ALDOAP04075 364 aaKnown RBP17.1■□□□□ 0.33
NDEL1-209ENST00000580738 THBS1P07996 1170 aa17.1■□□□□ 0.33
NDEL1-209ENST00000580738 CCNG1P51959 295 aa17.1■□□□□ 0.33
NDEL1-209ENST00000580738 CTBP2P56545 445 aa17.1■□□□□ 0.33
NDEL1-209ENST00000580738 MRPS25P82663 173 aaKnown RBP17.1■□□□□ 0.33
NDEL1-209ENST00000580738 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.1■□□□□ 0.33
NDEL1-209ENST00000580738 FAM83EQ2M2I3 478 aa17.1■□□□□ 0.33
NDEL1-209ENST00000580738 OR9A2Q8NGT5 310 aa17.1■□□□□ 0.33
NDEL1-209ENST00000580738 FBXW5Q969U6 566 aa17.1■□□□□ 0.33
NDEL1-209ENST00000580738 C1GALT1C1Q96EU7 318 aa17.1■□□□□ 0.33
NDEL1-209ENST00000580738 GMPPAQ96IJ6 420 aaPredicted RBP17.1■□□□□ 0.33
NDEL1-209ENST00000580738 NSUN5Q96P11 429 aaKnown RBP17.1■□□□□ 0.33
NDEL1-209ENST00000580738 NTMT1Q9BV86 223 aa17.1■□□□□ 0.33
NDEL1-209ENST00000580738 PRRG4Q9BZD6 226 aa17.1■□□□□ 0.33
NDEL1-209ENST00000580738 PFDN4Q9NQP4 134 aa17.1■□□□□ 0.33
NDEL1-209ENST00000580738 WHRNQ9P202 907 aa17.1■□□□□ 0.33
NDEL1-209ENST00000580738 GDF2Q9UK05 429 aaPredicted RBP17.1■□□□□ 0.33
NDEL1-209ENST00000580738 UTS2RQ9UKP6 389 aa17.1■□□□□ 0.33
NDEL1-209ENST00000580738 RNF115Q9Y4L5 304 aa17.1■□□□□ 0.33
NDEL1-209ENST00000580738 SS18L1O75177 396 aaPredicted RBP17.09■□□□□ 0.33
NDEL1-209ENST00000580738 BCAS2O75934 225 aaPredicted RBP17.09■□□□□ 0.33
NDEL1-209ENST00000580738 C2P06681 752 aa17.09■□□□□ 0.33
NDEL1-209ENST00000580738 IL11P20809 199 aa17.09■□□□□ 0.33
NDEL1-209ENST00000580738 EIF1AXP47813 144 aaKnown RBP17.09■□□□□ 0.33
NDEL1-209ENST00000580738 FAPQ12884 760 aa17.09■□□□□ 0.33
NDEL1-209ENST00000580738 IFT88Q13099 833 aa17.09■□□□□ 0.33
NDEL1-209ENST00000580738 TRAF3Q13114 568 aa17.09■□□□□ 0.33
NDEL1-209ENST00000580738 GANABQ14697 944 aaKnown RBP17.09■□□□□ 0.33
NDEL1-209ENST00000580738 ACAP2Q15057 778 aa17.09■□□□□ 0.33
NDEL1-209ENST00000580738 BEND4Q6ZU67 534 aa17.09■□□□□ 0.33
NDEL1-209ENST00000580738 ATG4DQ86TL0 474 aaPredicted RBP17.09■□□□□ 0.33
NDEL1-209ENST00000580738 UHMK1Q8TAS1 419 aaKnown RBP17.09■□□□□ 0.33
NDEL1-209ENST00000580738 DUSP19Q8WTR2 217 aa17.09■□□□□ 0.33
NDEL1-209ENST00000580738 GPR78Q96P69 363 aa17.09■□□□□ 0.33
NDEL1-209ENST00000580738 PTGES2Q9H7Z7 377 aa17.09■□□□□ 0.33
NDEL1-209ENST00000580738 GPR52Q9Y2T5 361 aa17.09■□□□□ 0.33
NDEL1-209ENST00000580738 OR10H1Q9Y4A9 318 aa17.09■□□□□ 0.33
NDEL1-209ENST00000580738 AP4B1Q9Y6B7 739 aa17.09■□□□□ 0.33
NDEL1-209ENST00000580738 EIF1AYO14602 144 aaKnown RBP17.08■□□□□ 0.32
NDEL1-209ENST00000580738 GMFGO60234 142 aa17.08■□□□□ 0.32
NDEL1-209ENST00000580738 PSMB1P20618 241 aaKnown RBP17.08■□□□□ 0.32
NDEL1-209ENST00000580738 MRPS22P82650 360 aaKnown RBP17.08■□□□□ 0.32
NDEL1-209ENST00000580738 ERCC6LQ2NKX8 1250 aa17.08■□□□□ 0.32
NDEL1-209ENST00000580738 C6orf52Q5T4I8 152 aa17.08■□□□□ 0.32
NDEL1-209ENST00000580738 LGSNQ5TDP6 509 aa17.08■□□□□ 0.32
NDEL1-209ENST00000580738 MARCH3Q86UD3 253 aa17.08■□□□□ 0.32
NDEL1-209ENST00000580738 CREG2Q8IUH2 290 aa17.08■□□□□ 0.32
NDEL1-209ENST00000580738 PTGR2Q8N8N7 351 aaPredicted RBP17.08■□□□□ 0.32
NDEL1-209ENST00000580738 S100PBPQ96BU1 408 aa17.08■□□□□ 0.32
NDEL1-209ENST00000580738 PHF21BQ96EK2 531 aa17.08■□□□□ 0.32
NDEL1-209ENST00000580738 TACO1Q9BSH4 297 aaKnown RBP17.08■□□□□ 0.32
NDEL1-209ENST00000580738 FAIM2Q9BWQ8 316 aa17.08■□□□□ 0.32
NDEL1-209ENST00000580738 OR10A4Q9H209 315 aa17.08■□□□□ 0.32
NDEL1-209ENST00000580738 ELOVL6Q9H5J4 265 aa17.08■□□□□ 0.32
NDEL1-209ENST00000580738 PDYNP01213 254 aa17.07■□□□□ 0.32
NDEL1-209ENST00000580738 TCP1P17987 556 aaKnown RBP17.07■□□□□ 0.32
NDEL1-209ENST00000580738 PSPHP78330 225 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms