RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 UQCRC1P31930 480 aa13.15□□□□□ -0.3
SMARCE1-216ENST00000580419 EVI2BP34910 448 aa13.15□□□□□ -0.3
SMARCE1-216ENST00000580419 MAP3K8P41279 467 aa13.15□□□□□ -0.3
SMARCE1-216ENST00000580419 FRKP42685 505 aaPredicted RBP13.15□□□□□ -0.3
SMARCE1-216ENST00000580419 FOXA1P55317 472 aa13.15□□□□□ -0.3
SMARCE1-216ENST00000580419 CLDN18P56856 261 aa13.15□□□□□ -0.3
SMARCE1-216ENST00000580419 FGFBP1Q14512 234 aa13.15□□□□□ -0.3
SMARCE1-216ENST00000580419 ZNHIT3Q15649 155 aaPredicted RBP13.15□□□□□ -0.3
SMARCE1-216ENST00000580419 DECR1Q16698 335 aa13.15□□□□□ -0.3
SMARCE1-216ENST00000580419 CFAP157Q5JU67 520 aa13.15□□□□□ -0.3
SMARCE1-216ENST00000580419 SPDYAQ5MJ70 313 aa13.15□□□□□ -0.3
SMARCE1-216ENST00000580419 SLC44A2Q8IWA5 706 aaPredicted RBP13.15□□□□□ -0.3
SMARCE1-216ENST00000580419 RIBC1Q8N443 379 aaPredicted RBP13.15□□□□□ -0.3
SMARCE1-216ENST00000580419 CCNYL1Q8N7R7 359 aa13.15□□□□□ -0.3
SMARCE1-216ENST00000580419 CHDHQ8NE62 594 aaPredicted RBP13.15□□□□□ -0.3
SMARCE1-216ENST00000580419 KAT2AQ92830 837 aa13.15□□□□□ -0.3
SMARCE1-216ENST00000580419 MTERF3Q96E29 417 aa13.15□□□□□ -0.3
SMARCE1-216ENST00000580419 DACH2Q96NX9 599 aa13.15□□□□□ -0.3
SMARCE1-216ENST00000580419 KCNA7Q96RP8 456 aa13.15□□□□□ -0.3
SMARCE1-216ENST00000580419 TUBA1CQ9BQE3 449 aa13.15□□□□□ -0.3
SMARCE1-216ENST00000580419 G6PC3Q9BUM1 346 aa13.15□□□□□ -0.3
SMARCE1-216ENST00000580419 POLDIP3Q9BY77 421 aaKnown RBP13.15□□□□□ -0.3
SMARCE1-216ENST00000580419 CLEC4MQ9H2X3 399 aaPredicted RBP13.15□□□□□ -0.3
SMARCE1-216ENST00000580419 L2HGDHQ9H9P8 463 aa13.15□□□□□ -0.3
SMARCE1-216ENST00000580419 Q9N2J8 555 aa13.15□□□□□ -0.3
SMARCE1-216ENST00000580419 TBK1Q9UHD2 729 aa13.15□□□□□ -0.3
SMARCE1-216ENST00000580419 ST6GALNAC2Q9UJ37 374 aa13.15□□□□□ -0.3
SMARCE1-216ENST00000580419 MAPRE3Q9UPY8 281 aa13.15□□□□□ -0.3
SMARCE1-216ENST00000580419 OR10H1Q9Y4A9 318 aa13.15□□□□□ -0.3
SMARCE1-216ENST00000580419 NUP214P35658 2090 aaPredicted RBP13.15□□□□□ -0.3
SMARCE1-216ENST00000580419 ARID1AO14497 2285 aa13.14□□□□□ -0.31
SMARCE1-216ENST00000580419 NAV3Q8IVL0 2385 aa13.14□□□□□ -0.31
SMARCE1-216ENST00000580419 A0A1W2PPM1 405 aa13.14□□□□□ -0.31
SMARCE1-216ENST00000580419 HSPA4LO95757 839 aa13.14□□□□□ -0.31
SMARCE1-216ENST00000580419 IL33O95760 270 aa13.14□□□□□ -0.31
SMARCE1-216ENST00000580419 DPP4P27487 766 aa13.14□□□□□ -0.31
SMARCE1-216ENST00000580419 CLK3P49761 638 aaKnown RBP13.14□□□□□ -0.31
SMARCE1-216ENST00000580419 NCBP2P52298 156 aaKnown RBP eCLIP13.14□□□□□ -0.31
SMARCE1-216ENST00000580419 B3GALT5-AS1P59052 145 aa13.14□□□□□ -0.31
SMARCE1-216ENST00000580419 MLC1Q15049 377 aa13.14□□□□□ -0.31
SMARCE1-216ENST00000580419 VPS26BQ4G0F5 336 aa13.14□□□□□ -0.31
SMARCE1-216ENST00000580419 DESI1Q6ICB0 168 aa13.14□□□□□ -0.31
SMARCE1-216ENST00000580419 FAM180BQ6P0A1 224 aa13.14□□□□□ -0.31
SMARCE1-216ENST00000580419 ZCCHC12Q6PEW1 402 aa13.14□□□□□ -0.31
SMARCE1-216ENST00000580419 ZZZ3Q8IYH5 903 aa13.14□□□□□ -0.31
SMARCE1-216ENST00000580419 C9orf106Q8NAJ2 232 aa13.14□□□□□ -0.31
SMARCE1-216ENST00000580419 CEP70Q8NHQ1 597 aa13.14□□□□□ -0.31
SMARCE1-216ENST00000580419 SMPDL3BQ92485 455 aa13.14□□□□□ -0.31
SMARCE1-216ENST00000580419 RMND5BQ96G75 393 aaPredicted RBP13.14□□□□□ -0.31
SMARCE1-216ENST00000580419 ALPK1Q96QP1 1244 aa13.14□□□□□ -0.31
SMARCE1-216ENST00000580419 RHOXF2Q9BQY4 288 aa13.14□□□□□ -0.31
SMARCE1-216ENST00000580419 GLIPR2Q9H4G4 154 aa13.14□□□□□ -0.31
SMARCE1-216ENST00000580419 PTGES2Q9H7Z7 377 aa13.14□□□□□ -0.31
SMARCE1-216ENST00000580419 ACSS1Q9NUB1 689 aaPredicted RBP13.14□□□□□ -0.31
SMARCE1-216ENST00000580419 DDX18Q9NVP1 670 aaKnown RBP13.14□□□□□ -0.31
SMARCE1-216ENST00000580419 C1orf109Q9NX04 203 aa13.14□□□□□ -0.31
SMARCE1-216ENST00000580419 ITGB1BP2Q9UKP3 347 aa13.14□□□□□ -0.31
SMARCE1-216ENST00000580419 CBLCQ9ULV8 474 aa13.14□□□□□ -0.31
SMARCE1-216ENST00000580419 CLCA1A8K7I4 914 aa13.13□□□□□ -0.31
SMARCE1-216ENST00000580419 A8MXE2 369 aa13.13□□□□□ -0.31
SMARCE1-216ENST00000580419 KDM4EB2RXH2 506 aaPredicted RBP13.13□□□□□ -0.31
SMARCE1-216ENST00000580419 H0Y3Z8 333 aa13.13□□□□□ -0.31
SMARCE1-216ENST00000580419 COPEO14579 308 aa13.13□□□□□ -0.31
SMARCE1-216ENST00000580419 MSTNO14793 375 aa13.13□□□□□ -0.31
SMARCE1-216ENST00000580419 RGS14O43566 566 aa13.13□□□□□ -0.31
SMARCE1-216ENST00000580419 TNFRSF21O75509 655 aa13.13□□□□□ -0.31
SMARCE1-216ENST00000580419 CRCPO75575 148 aa13.13□□□□□ -0.31
SMARCE1-216ENST00000580419 SERPINB5P36952 375 aa13.13□□□□□ -0.31
SMARCE1-216ENST00000580419 SLCO1A2P46721 670 aa13.13□□□□□ -0.31
SMARCE1-216ENST00000580419 DGKQP52824 942 aa13.13□□□□□ -0.31
SMARCE1-216ENST00000580419 ART1P52961 327 aa13.13□□□□□ -0.31
SMARCE1-216ENST00000580419 IST1P53990 364 aa13.13□□□□□ -0.31
SMARCE1-216ENST00000580419 DIO3P55073 304 aa13.13□□□□□ -0.31
SMARCE1-216ENST00000580419 PRR5P85299 388 aa13.13□□□□□ -0.31
SMARCE1-216ENST00000580419 C17orf67Q0P5P2 114 aa13.13□□□□□ -0.31
SMARCE1-216ENST00000580419 PDE7AQ13946 482 aa13.13□□□□□ -0.31
SMARCE1-216ENST00000580419 KRTAP21-3Q3LHN1 58 aa13.13□□□□□ -0.31
SMARCE1-216ENST00000580419 NATD1Q8N6N6 113 aa13.13□□□□□ -0.31
SMARCE1-216ENST00000580419 ZFP28Q8NHY6 868 aa13.13□□□□□ -0.31
SMARCE1-216ENST00000580419 ZBED6CLQ96FA7 236 aaPredicted RBP13.13□□□□□ -0.31
SMARCE1-216ENST00000580419 SFXN2Q96NB2 322 aa13.13□□□□□ -0.31
SMARCE1-216ENST00000580419 EBPLQ9BY08 206 aa13.13□□□□□ -0.31
SMARCE1-216ENST00000580419 GIN1Q9NXP7 522 aa13.13□□□□□ -0.31
SMARCE1-216ENST00000580419 STOML1Q9UBI4 398 aa13.13□□□□□ -0.31
SMARCE1-216ENST00000580419 FBXL2Q9UKC9 423 aa13.13□□□□□ -0.31
SMARCE1-216ENST00000580419 ZNF175Q9Y473 711 aa13.13□□□□□ -0.31
SMARCE1-216ENST00000580419 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.12□□□□□ -0.31
SMARCE1-216ENST00000580419 C7orf72A4D263 438 aa13.12□□□□□ -0.31
SMARCE1-216ENST00000580419 AZIN1O14977 448 aa13.12□□□□□ -0.31
SMARCE1-216ENST00000580419 TRIM13O60858 407 aa13.12□□□□□ -0.31
SMARCE1-216ENST00000580419 TNFSF13O75888 250 aa13.12□□□□□ -0.31
SMARCE1-216ENST00000580419 CHEK2O96017 543 aa13.12□□□□□ -0.31
SMARCE1-216ENST00000580419 JUNP05412 331 aaKnown RBP13.12□□□□□ -0.31
SMARCE1-216ENST00000580419 NUDT17P0C025 328 aa13.12□□□□□ -0.31
SMARCE1-216ENST00000580419 KRT4P19013 534 aa13.12□□□□□ -0.31
SMARCE1-216ENST00000580419 MC3RP41968 323 aa13.12□□□□□ -0.31
SMARCE1-216ENST00000580419 ASMTP46597 345 aa13.12□□□□□ -0.31
SMARCE1-216ENST00000580419 BTKQ06187 659 aa13.12□□□□□ -0.31
SMARCE1-216ENST00000580419 TMEM44Q2T9K0 475 aa13.12□□□□□ -0.31
SMARCE1-216ENST00000580419 LRIG3Q6UXM1 1119 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms