RNA–Protein interactions for RNA: ENST00000579640.5

SS18-213, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-213ENST00000579640 MTHFD2LQ9H903 347 aaPredicted RBP9.93□□□□□ -0.82
SS18-213ENST00000579640 CACYBPQ9HB71 228 aaKnown RBP9.93□□□□□ -0.82
SS18-213ENST00000579640 ATP13A2Q9NQ11 1180 aa9.93□□□□□ -0.82
SS18-213ENST00000579640 OLAHQ9NV23 265 aa9.93□□□□□ -0.82
SS18-213ENST00000579640 MYOTQ9UBF9 498 aa9.93□□□□□ -0.82
SS18-213ENST00000579640 RPS6KA6Q9UK32 745 aa9.93□□□□□ -0.82
SS18-213ENST00000579640 WDR45Q9Y484 360 aa9.93□□□□□ -0.82
SS18-213ENST00000579640 DSPPQ9NZW4 1301 aa9.92□□□□□ -0.82
SS18-213ENST00000579640 TMEM200CA6NKL6 621 aa9.92□□□□□ -0.82
SS18-213ENST00000579640 IL33O95760 270 aa9.92□□□□□ -0.82
SS18-213ENST00000579640 ATP6V1B2P21281 511 aa9.92□□□□□ -0.82
SS18-213ENST00000579640 PLCXD2Q0VAA5 305 aa9.92□□□□□ -0.82
SS18-213ENST00000579640 NNATQ16517 81 aa9.92□□□□□ -0.82
SS18-213ENST00000579640 LRRC23Q53EV4 343 aaPredicted RBP9.92□□□□□ -0.82
SS18-213ENST00000579640 TYW3Q6IPR3 259 aaKnown RBP9.92□□□□□ -0.82
SS18-213ENST00000579640 H3F3CQ6NXT2 135 aa9.92□□□□□ -0.82
SS18-213ENST00000579640 CYP2R1Q6VVX0 501 aa9.92□□□□□ -0.82
SS18-213ENST00000579640 FRRS1Q6ZNA5 592 aa9.92□□□□□ -0.82
SS18-213ENST00000579640 ZNF619Q8N2I2 560 aa9.92□□□□□ -0.82
SS18-213ENST00000579640 SLC5A8Q8N695 610 aa9.92□□□□□ -0.82
SS18-213ENST00000579640 CLEC1AQ8NC01 280 aa9.92□□□□□ -0.82
SS18-213ENST00000579640 BHLHE22Q8NFJ8 381 aaPredicted RBP9.92□□□□□ -0.82
SS18-213ENST00000579640 OR4N2Q8NGD1 307 aa9.92□□□□□ -0.82
SS18-213ENST00000579640 WDR60Q8WVS4 1066 aa9.92□□□□□ -0.82
SS18-213ENST00000579640 NAF1Q96HR8 494 aaKnown RBP9.92□□□□□ -0.82
SS18-213ENST00000579640 DENND2DQ9H6A0 471 aaPredicted RBP9.92□□□□□ -0.82
SS18-213ENST00000579640 RUBCNLQ9H714 662 aa9.92□□□□□ -0.82
SS18-213ENST00000579640 SAMD4AQ9UPU9 718 aaKnown RBP9.92□□□□□ -0.82
SS18-213ENST00000579640 POLHQ9Y253 713 aa9.92□□□□□ -0.82
SS18-213ENST00000579640 RRP15Q9Y3B9 282 aaKnown RBP9.92□□□□□ -0.82
SS18-213ENST00000579640 PCDHGA10Q9Y5H3 936 aa9.92□□□□□ -0.82
SS18-213ENST00000579640 GPC6Q9Y625 555 aaPredicted RBP9.92□□□□□ -0.82
SS18-213ENST00000579640 SPTBN2O15020 2390 aa9.92□□□□□ -0.82
SS18-213ENST00000579640 H0YHG0 523 aa9.91□□□□□ -0.82
SS18-213ENST00000579640 M0QX08 132 aa9.91□□□□□ -0.82
SS18-213ENST00000579640 NKX2-8O15522 239 aa9.91□□□□□ -0.82
SS18-213ENST00000579640 KIAA0513O60268 411 aa9.91□□□□□ -0.82
SS18-213ENST00000579640 ABCB7O75027 752 aa9.91□□□□□ -0.82
SS18-213ENST00000579640 GCM2O75603 506 aaPredicted RBP9.91□□□□□ -0.82
SS18-213ENST00000579640 CELA2AP08217 269 aa9.91□□□□□ -0.82
SS18-213ENST00000579640 UMPSP11172 480 aa9.91□□□□□ -0.82
SS18-213ENST00000579640 ITGAMP11215 1152 aa9.91□□□□□ -0.82
SS18-213ENST00000579640 HOXB6P17509 224 aaKnown RBP9.91□□□□□ -0.82
SS18-213ENST00000579640 IL12BP29460 328 aa9.91□□□□□ -0.82
SS18-213ENST00000579640 AQP1P29972 269 aa9.91□□□□□ -0.82
SS18-213ENST00000579640 TMED10P49755 219 aaKnown RBP9.91□□□□□ -0.82
SS18-213ENST00000579640 PNLIPRP2P54317 469 aa9.91□□□□□ -0.82
SS18-213ENST00000579640 CHRNEQ04844 493 aa9.91□□□□□ -0.82
SS18-213ENST00000579640 Q0VFX4 171 aa9.91□□□□□ -0.82
SS18-213ENST00000579640 CDC20Q12834 499 aa9.91□□□□□ -0.82
SS18-213ENST00000579640 KPNB1Q14974 876 aaKnown RBP9.91□□□□□ -0.82
SS18-213ENST00000579640 RPS26P11Q5JNZ5 115 aaPredicted RBP9.91□□□□□ -0.82
SS18-213ENST00000579640 CCNJQ5T5M9 372 aa9.91□□□□□ -0.82
SS18-213ENST00000579640 TCTN3Q6NUS6 607 aa9.91□□□□□ -0.82
SS18-213ENST00000579640 FIGNL1Q6PIW4 674 aa9.91□□□□□ -0.82
SS18-213ENST00000579640 RPS19BP1Q86WX3 136 aaKnown RBP9.91□□□□□ -0.82
SS18-213ENST00000579640 SPPL2CQ8IUH8 684 aa9.91□□□□□ -0.82
SS18-213ENST00000579640 DND1Q8IYX4 353 aaKnown RBP9.91□□□□□ -0.82
SS18-213ENST00000579640 SPPL2AQ8TCT8 520 aa9.91□□□□□ -0.82
SS18-213ENST00000579640 SLC26A7Q8TE54 656 aa9.91□□□□□ -0.82
SS18-213ENST00000579640 DIO2Q92813 273 aa9.91□□□□□ -0.82
SS18-213ENST00000579640 GATA6Q92908 595 aa9.91□□□□□ -0.82
SS18-213ENST00000579640 TMBIM1Q969X1 311 aa9.91□□□□□ -0.82
SS18-213ENST00000579640 OMA1Q96E52 524 aa9.91□□□□□ -0.82
SS18-213ENST00000579640 HOXD1Q9GZZ0 328 aa9.91□□□□□ -0.82
SS18-213ENST00000579640 DCAF13Q9NV06 445 aaKnown RBP9.91□□□□□ -0.82
SS18-213ENST00000579640 ADPRHL2Q9NX46 363 aa9.91□□□□□ -0.82
SS18-213ENST00000579640 SSUH2Q9Y2M2 353 aa9.91□□□□□ -0.82
SS18-213ENST00000579640 YARS2Q9Y2Z4 477 aaKnown RBP9.91□□□□□ -0.82
SS18-213ENST00000579640 IFT52Q9Y366 437 aa9.91□□□□□ -0.82
SS18-213ENST00000579640 NPFFR2Q9Y5X5 522 aa9.91□□□□□ -0.82
SS18-213ENST00000579640 PCSK5Q92824 1860 aa9.91□□□□□ -0.82
SS18-213ENST00000579640 OR6C70A6NIJ9 312 aa9.91□□□□□ -0.82
SS18-213ENST00000579640 WWP2O00308 870 aa9.91□□□□□ -0.82
SS18-213ENST00000579640 CDK2AP1O14519 115 aa9.91□□□□□ -0.82
SS18-213ENST00000579640 RRP8O43159 456 aaKnown RBP9.91□□□□□ -0.82
SS18-213ENST00000579640 SUV39H1O43463 412 aa9.91□□□□□ -0.82
SS18-213ENST00000579640 HS6ST1O60243 411 aa9.91□□□□□ -0.82
SS18-213ENST00000579640 TSPAN2O60636 221 aa9.91□□□□□ -0.82
SS18-213ENST00000579640 FCMRO60667 390 aa9.91□□□□□ -0.82
SS18-213ENST00000579640 REM1O75628 298 aa9.91□□□□□ -0.82
SS18-213ENST00000579640 NADKO95544 446 aaPredicted RBP9.91□□□□□ -0.82
SS18-213ENST00000579640 SERPINA1P01009 418 aa9.91□□□□□ -0.82
SS18-213ENST00000579640 ALPPP05187 535 aa9.91□□□□□ -0.82
SS18-213ENST00000579640 ABCD3P28288 659 aa9.91□□□□□ -0.82
SS18-213ENST00000579640 SOX8P57073 446 aa9.91□□□□□ -0.82
SS18-213ENST00000579640 MLF1P58340 268 aa9.91□□□□□ -0.82
SS18-213ENST00000579640 RHDQ02161 417 aa9.91□□□□□ -0.82
SS18-213ENST00000579640 SRSF6Q13247 344 aaKnown RBP9.91□□□□□ -0.82
SS18-213ENST00000579640 EFR3AQ14156 821 aa9.91□□□□□ -0.82
SS18-213ENST00000579640 FLYWCH1Q4VC44 716 aa9.91□□□□□ -0.82
SS18-213ENST00000579640 IRAK1BP1Q5VVH5 260 aa9.91□□□□□ -0.82
SS18-213ENST00000579640 CBLL1Q75N03 491 aa9.91□□□□□ -0.82
SS18-213ENST00000579640 EIF3MQ7L2H7 374 aaKnown RBP9.91□□□□□ -0.82
SS18-213ENST00000579640 SPATA24Q86W54 205 aa9.91□□□□□ -0.82
SS18-213ENST00000579640 PEX5LQ8IYB4 626 aa9.91□□□□□ -0.82
SS18-213ENST00000579640 THAP3Q8WTV1 239 aaPredicted RBP9.91□□□□□ -0.82
SS18-213ENST00000579640 LZICQ8WZA0 190 aa9.91□□□□□ -0.82
SS18-213ENST00000579640 THOC3Q96J01 351 aaKnown RBP9.91□□□□□ -0.82
SS18-213ENST00000579640 ZNF354BQ96LW1 612 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms