RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 FASNP49327 2511 aaKnown RBP7.26□□□□□ -1.25
CCDC40-215ENST00000576033 TRAV17A0A0B4J275 112 aa7.26□□□□□ -1.25
CCDC40-215ENST00000576033 RNF103-CHMP3A0A140T963 221 aa7.26□□□□□ -1.25
CCDC40-215ENST00000576033 PRORSD1PA6NEY8 169 aa7.26□□□□□ -1.25
CCDC40-215ENST00000576033 FRG2CA6NGY1 282 aa7.26□□□□□ -1.25
CCDC40-215ENST00000576033 LRRC3CA6NJW4 275 aa7.26□□□□□ -1.25
CCDC40-215ENST00000576033 H3BNX3 289 aa7.26□□□□□ -1.25
CCDC40-215ENST00000576033 PLOD2O00469 737 aa7.26□□□□□ -1.25
CCDC40-215ENST00000576033 CFLARO15519 480 aa7.26□□□□□ -1.25
CCDC40-215ENST00000576033 DYRK3O43781 588 aa7.26□□□□□ -1.25
CCDC40-215ENST00000576033 GMFGO60234 142 aa7.26□□□□□ -1.25
CCDC40-215ENST00000576033 PLOD3O60568 738 aa7.26□□□□□ -1.25
CCDC40-215ENST00000576033 ICOSLGO75144 302 aa7.26□□□□□ -1.25
CCDC40-215ENST00000576033 FKBP6O75344 327 aa7.26□□□□□ -1.25
CCDC40-215ENST00000576033 ZIC2O95409 532 aaPredicted RBP7.26□□□□□ -1.25
CCDC40-215ENST00000576033 HMGN2P05204 90 aaKnown RBP7.26□□□□□ -1.25
CCDC40-215ENST00000576033 FBXO45P0C2W1 286 aa7.26□□□□□ -1.25
CCDC40-215ENST00000576033 RFPL3SP0C7P2 107 aa7.26□□□□□ -1.25
CCDC40-215ENST00000576033 RNF224P0DH78 156 aa7.26□□□□□ -1.25
CCDC40-215ENST00000576033 HSD17B1P14061 328 aa7.26□□□□□ -1.25
CCDC40-215ENST00000576033 HOXB9P17482 250 aaPredicted RBP7.26□□□□□ -1.25
CCDC40-215ENST00000576033 PRPS1L1P21108 318 aa7.26□□□□□ -1.25
CCDC40-215ENST00000576033 GNLYP22749 145 aa7.26□□□□□ -1.25
CCDC40-215ENST00000576033 TCEA1P23193 301 aaKnown RBP7.26□□□□□ -1.25
CCDC40-215ENST00000576033 ME2P23368 584 aa7.26□□□□□ -1.25
CCDC40-215ENST00000576033 SLC6A2P23975 617 aa7.26□□□□□ -1.25
CCDC40-215ENST00000576033 PTGDSP41222 190 aa7.26□□□□□ -1.25
CCDC40-215ENST00000576033 KIR3DL1P43629 444 aa7.26□□□□□ -1.25
CCDC40-215ENST00000576033 TDGF1P3P51864 188 aa7.26□□□□□ -1.25
CCDC40-215ENST00000576033 KCNK10P57789 538 aa7.26□□□□□ -1.25
CCDC40-215ENST00000576033 MS4A2Q01362 244 aa7.26□□□□□ -1.25
CCDC40-215ENST00000576033 FUT5Q11128 374 aa7.26□□□□□ -1.25
CCDC40-215ENST00000576033 TRAP1Q12931 704 aaKnown RBP7.26□□□□□ -1.25
CCDC40-215ENST00000576033 RCN1Q15293 331 aa7.26□□□□□ -1.25
CCDC40-215ENST00000576033 SPDYE7PQ495Y7 208 aa7.26□□□□□ -1.25
CCDC40-215ENST00000576033 COX20Q5RI15 118 aa7.26□□□□□ -1.25
CCDC40-215ENST00000576033 C1orf146Q5VVC0 180 aa7.26□□□□□ -1.25
CCDC40-215ENST00000576033 HLA-DQA1Q5Y7H0 255 aa7.26□□□□□ -1.25
CCDC40-215ENST00000576033 MFSD12Q6NUT3 480 aa7.26□□□□□ -1.25
CCDC40-215ENST00000576033 FIGNL1Q6PIW4 674 aa7.26□□□□□ -1.25
CCDC40-215ENST00000576033 DLEU7Q6UYE1 221 aa7.26□□□□□ -1.25
CCDC40-215ENST00000576033 R3HCC1LQ7Z5L2 792 aaKnown RBP7.26□□□□□ -1.25
CCDC40-215ENST00000576033 SLC15A3Q8IY34 581 aa7.26□□□□□ -1.25
CCDC40-215ENST00000576033 LGI4Q8N135 537 aa7.26□□□□□ -1.25
CCDC40-215ENST00000576033 C10orf111Q8N326 155 aa7.26□□□□□ -1.25
CCDC40-215ENST00000576033 SLC16A11Q8NCK7 471 aa7.26□□□□□ -1.25
CCDC40-215ENST00000576033 LSM14AQ8ND56 463 aaKnown RBP7.26□□□□□ -1.25
CCDC40-215ENST00000576033 OR5L2Q8NGL0 311 aa7.26□□□□□ -1.25
CCDC40-215ENST00000576033 SLC22A8Q8TCC7 542 aa7.26□□□□□ -1.25
CCDC40-215ENST00000576033 TM9SF4Q92544 642 aa7.26□□□□□ -1.25
CCDC40-215ENST00000576033 SLC9A6Q92581 669 aa7.26□□□□□ -1.25
CCDC40-215ENST00000576033 CDS1Q92903 461 aa7.26□□□□□ -1.25
CCDC40-215ENST00000576033 HGDQ93099 445 aa7.26□□□□□ -1.25
CCDC40-215ENST00000576033 MIB2Q96AX9 1013 aa7.26□□□□□ -1.25
CCDC40-215ENST00000576033 TESCQ96BS2 214 aa7.26□□□□□ -1.25
CCDC40-215ENST00000576033 LRRC58Q96CX6 371 aa7.26□□□□□ -1.25
CCDC40-215ENST00000576033 ASB9Q96DX5 294 aa7.26□□□□□ -1.25
CCDC40-215ENST00000576033 MTERF3Q96E29 417 aa7.26□□□□□ -1.25
CCDC40-215ENST00000576033 SPACA9Q96E40 222 aaPredicted RBP7.26□□□□□ -1.25
CCDC40-215ENST00000576033 ZBED6CLQ96FA7 236 aaPredicted RBP7.26□□□□□ -1.25
CCDC40-215ENST00000576033 DUS3LQ96G46 650 aaKnown RBP7.26□□□□□ -1.25
CCDC40-215ENST00000576033 RMND5BQ96G75 393 aaPredicted RBP7.26□□□□□ -1.25
CCDC40-215ENST00000576033 LCORQ96JN0 433 aaPredicted RBP7.26□□□□□ -1.25
CCDC40-215ENST00000576033 MS4A4EQ96PG1 132 aa7.26□□□□□ -1.25
CCDC40-215ENST00000576033 BTBD9Q96Q07 612 aa7.26□□□□□ -1.25
CCDC40-215ENST00000576033 ADOQ96SZ5 270 aa7.26□□□□□ -1.25
CCDC40-215ENST00000576033 TRIM45Q9H8W5 580 aaPredicted RBP7.26□□□□□ -1.25
CCDC40-215ENST00000576033 S100A14Q9HCY8 104 aa7.26□□□□□ -1.25
CCDC40-215ENST00000576033 SPAG4Q9NPE6 437 aa7.26□□□□□ -1.25
CCDC40-215ENST00000576033 ZCCHC3Q9NUD5 404 aaKnown RBP7.26□□□□□ -1.25
CCDC40-215ENST00000576033 GIN1Q9NXP7 522 aa7.26□□□□□ -1.25
CCDC40-215ENST00000576033 TUBA8Q9NY65 449 aaPredicted RBP7.26□□□□□ -1.25
CCDC40-215ENST00000576033 SLAMF8Q9P0V8 285 aa7.26□□□□□ -1.25
CCDC40-215ENST00000576033 ABI3Q9P2A4 366 aa7.26□□□□□ -1.25
CCDC40-215ENST00000576033 TNFRSF10DQ9UBN6 386 aa7.26□□□□□ -1.25
CCDC40-215ENST00000576033 LEF1Q9UJU2 399 aaPredicted RBP7.26□□□□□ -1.25
CCDC40-215ENST00000576033 CNOT11Q9UKZ1 510 aaKnown RBP7.26□□□□□ -1.25
CCDC40-215ENST00000576033 GPR55Q9Y2T6 319 aaPredicted RBP7.26□□□□□ -1.25
CCDC40-215ENST00000576033 PCDHGB7Q9Y5F8 929 aa7.26□□□□□ -1.25
CCDC40-215ENST00000576033 NPFFR2Q9Y5X5 522 aa7.26□□□□□ -1.25
CCDC40-215ENST00000576033 PCNX3Q9H6A9 2034 aa7.26□□□□□ -1.25
CCDC40-215ENST00000576033 KIAA1549Q9HCM3 1950 aa7.26□□□□□ -1.25
CCDC40-215ENST00000576033 FREM3P0C091 2139 aa7.25□□□□□ -1.25
CCDC40-215ENST00000576033 A0A087WV62 115 aa7.25□□□□□ -1.25
CCDC40-215ENST00000576033 TRBV5-3A0A0A0MS03 114 aa7.25□□□□□ -1.25
CCDC40-215ENST00000576033 C15orf38-AP3S2A0A0A6YYH1 394 aa7.25□□□□□ -1.25
CCDC40-215ENST00000576033 PRAMEF27A3QJZ7 478 aa7.25□□□□□ -1.25
CCDC40-215ENST00000576033 NME4O00746 187 aa7.25□□□□□ -1.25
CCDC40-215ENST00000576033 ANGPT2O15123 496 aa7.25□□□□□ -1.25
CCDC40-215ENST00000576033 PEX1O43933 1283 aa7.25□□□□□ -1.25
CCDC40-215ENST00000576033 HS6ST1O60243 411 aa7.25□□□□□ -1.25
CCDC40-215ENST00000576033 TSPAN2O60636 221 aa7.25□□□□□ -1.25
CCDC40-215ENST00000576033 PPM1BO75688 479 aa7.25□□□□□ -1.25
CCDC40-215ENST00000576033 RASAL1O95294 804 aa7.25□□□□□ -1.25
CCDC40-215ENST00000576033 PGRP06401 933 aa7.25□□□□□ -1.25
CCDC40-215ENST00000576033 C8BP07358 591 aa7.25□□□□□ -1.25
CCDC40-215ENST00000576033 SFTPCP11686 197 aa7.25□□□□□ -1.25
CCDC40-215ENST00000576033 CYP4B1P13584 511 aa7.25□□□□□ -1.25
CCDC40-215ENST00000576033 PTPN6P29350 595 aa7.25□□□□□ -1.25
CCDC40-215ENST00000576033 S100A3P33764 101 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms