RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 AK1P00568 194 aa13.35□□□□□ -0.27
NPLOC4-218ENST00000574964 MAGEA8P43361 318 aa13.35□□□□□ -0.27
NPLOC4-218ENST00000574964 MAN2A2P49641 1150 aa13.35□□□□□ -0.27
NPLOC4-218ENST00000574964 HPCAP84074 193 aa13.35□□□□□ -0.27
NPLOC4-218ENST00000574964 NFATC3Q12968 1075 aa13.35□□□□□ -0.27
NPLOC4-218ENST00000574964 PLEKHN1Q494U1 663 aaPredicted RBP13.35□□□□□ -0.27
NPLOC4-218ENST00000574964 RUNDC3AQ59EK9 446 aa13.35□□□□□ -0.27
NPLOC4-218ENST00000574964 CCNJQ5T5M9 372 aa13.35□□□□□ -0.27
NPLOC4-218ENST00000574964 SLC6A19Q695T7 634 aa13.35□□□□□ -0.27
NPLOC4-218ENST00000574964 DLEU7Q6UYE1 221 aa13.35□□□□□ -0.27
NPLOC4-218ENST00000574964 GALNTL5Q7Z4T8 443 aa13.35□□□□□ -0.27
NPLOC4-218ENST00000574964 MDGA2Q7Z553 956 aa13.35□□□□□ -0.27
NPLOC4-218ENST00000574964 OR52N2Q8NGI0 321 aa13.35□□□□□ -0.27
NPLOC4-218ENST00000574964 LRRC58Q96CX6 371 aa13.35□□□□□ -0.27
NPLOC4-218ENST00000574964 ANKRD27Q96NW4 1050 aa13.35□□□□□ -0.27
NPLOC4-218ENST00000574964 METTL7AQ9H8H3 244 aa13.35□□□□□ -0.27
NPLOC4-218ENST00000574964 CNIH4Q9P003 139 aa13.35□□□□□ -0.27
NPLOC4-218ENST00000574964 LUZP4Q9P127 313 aa13.35□□□□□ -0.27
NPLOC4-218ENST00000574964 KCNE3Q9Y6H6 103 aa13.35□□□□□ -0.27
NPLOC4-218ENST00000574964 TLN1Q9Y490 2541 aaKnown RBP13.35□□□□□ -0.27
NPLOC4-218ENST00000574964 PCNX3Q9H6A9 2034 aa13.34□□□□□ -0.27
NPLOC4-218ENST00000574964 CFAP47Q6ZTR5 3102 aa13.34□□□□□ -0.27
NPLOC4-218ENST00000574964 KLRC4-KLRK1H3BQV0 150 aa13.34□□□□□ -0.27
NPLOC4-218ENST00000574964 NPPAP01160 153 aa13.34□□□□□ -0.27
NPLOC4-218ENST00000574964 C1QCP02747 245 aa13.34□□□□□ -0.27
NPLOC4-218ENST00000574964 NR2F1P10589 423 aa13.34□□□□□ -0.27
NPLOC4-218ENST00000574964 CYP4B1P13584 511 aa13.34□□□□□ -0.27
NPLOC4-218ENST00000574964 ETFAP13804 333 aa13.34□□□□□ -0.27
NPLOC4-218ENST00000574964 HPGDP15428 266 aa13.34□□□□□ -0.27
NPLOC4-218ENST00000574964 CLK3P49761 638 aaKnown RBP13.34□□□□□ -0.27
NPLOC4-218ENST00000574964 DSTNP60981 165 aa13.34□□□□□ -0.27
NPLOC4-218ENST00000574964 FADDQ13158 208 aa13.34□□□□□ -0.27
NPLOC4-218ENST00000574964 CAPRIN1Q14444 709 aaKnown RBP13.34□□□□□ -0.27
NPLOC4-218ENST00000574964 GPAT3Q53EU6 434 aa13.34□□□□□ -0.27
NPLOC4-218ENST00000574964 COX20Q5RI15 118 aa13.34□□□□□ -0.27
NPLOC4-218ENST00000574964 EXOSC6Q5RKV6 272 aaKnown RBP13.34□□□□□ -0.27
NPLOC4-218ENST00000574964 DCST2Q5T1A1 773 aa13.34□□□□□ -0.27
NPLOC4-218ENST00000574964 PRAMEF20Q5VT98 475 aa13.34□□□□□ -0.27
NPLOC4-218ENST00000574964 GALNT10Q86SR1 603 aa13.34□□□□□ -0.27
NPLOC4-218ENST00000574964 MSRB3Q8IXL7 192 aa13.34□□□□□ -0.27
NPLOC4-218ENST00000574964 SPPL2AQ8TCT8 520 aa13.34□□□□□ -0.27
NPLOC4-218ENST00000574964 SCMH1Q96GD3 660 aa13.34□□□□□ -0.27
NPLOC4-218ENST00000574964 SECISBP2Q96T21 854 aaKnown RBP13.34□□□□□ -0.27
NPLOC4-218ENST00000574964 SH3GL1Q99961 368 aa13.34□□□□□ -0.27
NPLOC4-218ENST00000574964 HES7Q9BYE0 225 aa13.34□□□□□ -0.27
NPLOC4-218ENST00000574964 THUMPD1Q9NXG2 353 aaKnown RBP13.34□□□□□ -0.27
NPLOC4-218ENST00000574964 KLRF1Q9NZS2 232 aa13.34□□□□□ -0.27
NPLOC4-218ENST00000574964 TAGLN3Q9UI15 199 aa13.34□□□□□ -0.27
NPLOC4-218ENST00000574964 LIPT1Q9Y234 373 aa13.34□□□□□ -0.27
NPLOC4-218ENST00000574964 TRBV5-3A0A0A0MS03 114 aa13.33□□□□□ -0.28
NPLOC4-218ENST00000574964 G3V3Y1 287 aa13.33□□□□□ -0.28
NPLOC4-218ENST00000574964 HMGN4O00479 90 aa13.33□□□□□ -0.28
NPLOC4-218ENST00000574964 SLC28A2O43868 658 aa13.33□□□□□ -0.28
NPLOC4-218ENST00000574964 NME2P1O60361 137 aa13.33□□□□□ -0.28
NPLOC4-218ENST00000574964 STX11O75558 287 aa13.33□□□□□ -0.28
NPLOC4-218ENST00000574964 UTS2O95399 124 aa13.33□□□□□ -0.28
NPLOC4-218ENST00000574964 CCL3P10147 92 aa13.33□□□□□ -0.28
NPLOC4-218ENST00000574964 ESRRAP11474 423 aaPredicted RBP13.33□□□□□ -0.28
NPLOC4-218ENST00000574964 HOXB9P17482 250 aaPredicted RBP13.33□□□□□ -0.28
NPLOC4-218ENST00000574964 CNR1P21554 472 aa13.33□□□□□ -0.28
NPLOC4-218ENST00000574964 NME2P22392 152 aa13.33□□□□□ -0.28
NPLOC4-218ENST00000574964 CPA2P48052 419 aa13.33□□□□□ -0.28
NPLOC4-218ENST00000574964 NUDT2P50583 147 aa13.33□□□□□ -0.28
NPLOC4-218ENST00000574964 MTPNP58546 118 aa13.33□□□□□ -0.28
NPLOC4-218ENST00000574964 GPR85P60893 370 aa13.33□□□□□ -0.28
NPLOC4-218ENST00000574964 KCNJ2P63252 427 aa13.33□□□□□ -0.28
NPLOC4-218ENST00000574964 CBX1P83916 185 aa13.33□□□□□ -0.28
NPLOC4-218ENST00000574964 MXRA7P84157 204 aa13.33□□□□□ -0.28
NPLOC4-218ENST00000574964 RGNQ15493 299 aa13.33□□□□□ -0.28
NPLOC4-218ENST00000574964 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.33□□□□□ -0.28
NPLOC4-218ENST00000574964 ARHGAP11BQ3KRB8 267 aa13.33□□□□□ -0.28
NPLOC4-218ENST00000574964 TBCELQ5QJ74 424 aa13.33□□□□□ -0.28
NPLOC4-218ENST00000574964 DESI1Q6ICB0 168 aa13.33□□□□□ -0.28
NPLOC4-218ENST00000574964 ZNF227Q86WZ6 799 aa13.33□□□□□ -0.28
NPLOC4-218ENST00000574964 FBXW8Q8N3Y1 598 aa13.33□□□□□ -0.28
NPLOC4-218ENST00000574964 FITM2Q8N6M3 262 aa13.33□□□□□ -0.28
NPLOC4-218ENST00000574964 PAQR8Q8TEZ7 354 aa13.33□□□□□ -0.28
NPLOC4-218ENST00000574964 HGDQ93099 445 aa13.33□□□□□ -0.28
NPLOC4-218ENST00000574964 ROPN1LQ96C74 230 aa13.33□□□□□ -0.28
NPLOC4-218ENST00000574964 NODALQ96S42 347 aa13.33□□□□□ -0.28
NPLOC4-218ENST00000574964 SDF2Q99470 211 aa13.33□□□□□ -0.28
NPLOC4-218ENST00000574964 CPPED1Q9BRF8 314 aaPredicted RBP13.33□□□□□ -0.28
NPLOC4-218ENST00000574964 ARL8BQ9NVJ2 186 aa13.33□□□□□ -0.28
NPLOC4-218ENST00000574964 P2RX2Q9UBL9 471 aa13.33□□□□□ -0.28
NPLOC4-218ENST00000574964 PCDHGB6Q9Y5F9 930 aa13.33□□□□□ -0.28
NPLOC4-218ENST00000574964 FAM208BQ5VWN6 2430 aa13.33□□□□□ -0.28
NPLOC4-218ENST00000574964 ZGRF1Q86YA3 2104 aa13.33□□□□□ -0.28
NPLOC4-218ENST00000574964 DNAJC13O75165 2243 aa13.32□□□□□ -0.28
NPLOC4-218ENST00000574964 C15orf38-AP3S2A0A0A6YYH1 394 aa13.32□□□□□ -0.28
NPLOC4-218ENST00000574964 PRAMEF25A6NGN4 478 aa13.32□□□□□ -0.28
NPLOC4-218ENST00000574964 C5orf58C9J3I9 102 aa13.32□□□□□ -0.28
NPLOC4-218ENST00000574964 PEX1O43933 1283 aa13.32□□□□□ -0.28
NPLOC4-218ENST00000574964 RASAL1O95294 804 aa13.32□□□□□ -0.28
NPLOC4-218ENST00000574964 IGKV1D-16P01601 117 aa13.32□□□□□ -0.28
NPLOC4-218ENST00000574964 LCN1P31025 176 aa13.32□□□□□ -0.28
NPLOC4-218ENST00000574964 MASP1P48740 699 aa13.32□□□□□ -0.28
NPLOC4-218ENST00000574964 DNASE1L1P49184 302 aa13.32□□□□□ -0.28
NPLOC4-218ENST00000574964 MEOX1P50221 254 aa13.32□□□□□ -0.28
NPLOC4-218ENST00000574964 MVDP53602 400 aa13.32□□□□□ -0.28
NPLOC4-218ENST00000574964 PLGLB1Q02325 96 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms